| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,158,983 | C→G | 5.8% | intergenic (+320/+548) | PP_5739 → / ← PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,158,983 | 0 | C | G | 5.8% | 326.1 / 6.0 | 101 | intergenic (+320/+548) | PP_5739/PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Reads supporting (aligned to +/- strand): ref base C (46/49); new base G (3/3); total (49/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
CAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCC > NC_002947/6158836‑6159131 | cAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCctct > 7:253864/1‑149 (MQ=255)cAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCctc > 4:317332/1‑148 (MQ=255) gCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCaa < 4:151326/149‑1 (MQ=255) ccGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAg < 2:75104/149‑1 (MQ=255) aaGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAggcgg < 7:285658/149‑1 (MQ=255) gATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑ttt > 1:82441/1‑149 (MQ=255) aTCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑tttt > 5:331342/1‑149 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGC‑ttttt < 8:377265/149‑1 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAATAAGCCGCCTTGAGAGGGCGGC‑tttttag < 1:248173/149‑3 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGC‑tttttag < 6:390917/149‑3 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACGGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑ttttttt > 6:134819/1‑149 (MQ=255) aTTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt < 8:244024/149‑1 (MQ=255) aTTTCGCTTTAGCGGATAAATTTTTCGTTTGGTTGAGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAATGCTTC‑tttttttt < 4:122648/149‑1 (MQ=255) tttCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCaa > 8:401515/1‑134 (MQ=255) tttCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCaa < 7:401515/134‑1 (MQ=255) tttCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTg > 2:74257/1‑149 (MQ=255) tttCGCTTTAGCGGCTAAATTTTTCGTTTCGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTg < 2:164430/149‑1 (MQ=255) gCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCGTCAACGTTCGACTGTTTCAGTACGTCGCAGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGGGGC‑TTTTTTTTGCGTc > 5:88528/1‑149 (MQ=255) gCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTc < 7:9727/149‑1 (MQ=255) gCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTc < 1:74257/149‑1 (MQ=255) gCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTc < 1:397100/149‑1 (MQ=255) gCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTc < 3:317332/149‑1 (MQ=255) gCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCctct < 2:112051/118‑1 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTAt > 6:422065/1‑149 (MQ=255) tAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATc < 2:82441/149‑1 (MQ=255) tAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATc > 8:265305/1‑149 (MQ=255) tttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTAcc > 1:144293/1‑149 (MQ=255) gTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGtgctg < 2:424717/149‑1 (MQ=255) gTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCACTCTCAAGTCGGC‑TTTTTTTTGCCACGGATTAGTATCGGTACCGTCGtgctg > 7:17627/1‑149 (MQ=255) cGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACCTCGCCGACGAACCTCTCAATTCGATGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGGCTCGGATTCGTATCCGTACCGTCGTGCTCCCAg > 6:47639/1‑149 (MQ=255) tCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgtg > 4:400672/1‑149 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgtgt < 1:216775/148‑1 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTc > 1:269385/1‑149 (MQ=255) aattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGc < 7:265305/148‑1 (MQ=255) ttaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgt > 7:241903/1‑141 (MQ=255) ttaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgt < 8:241903/141‑1 (MQ=255) ttaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCg > 5:364315/1‑148 (MQ=255) taTGATTTTGCTCTAGCCCTGATCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCGGCGCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGGCAGTGTCGCCGa < 8:231770/148‑1 (MQ=255) taTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGaa > 5:224162/1‑149 (MQ=255) aTGATTTATCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGaa < 8:368842/148‑1 (MQ=255) tGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAAc < 8:393143/148‑1 (MQ=255) ttAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGAAGAACCTCTCAATTCATTTGCTAAAAAGCCGCACTCTCAAGGAGTC‑TTTTTTTTGACTCGGATTCGTAGGGGTACAGTCGTGCTGCCACTGTCGACGAAAttta > 4:263412/1‑146 (MQ=255) cTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt > 1:188564/1‑149 (MQ=255) cTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCCTTGGCTAAAAAGCGGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt < 2:80985/149‑1 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt > 5:278102/1‑148 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGTCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGa < 2:188564/148‑1 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGa > 1:42652/1‑149 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACtt > 4:56863/1‑134 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACtt < 3:56863/134‑1 (MQ=255) tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGACCTCTCAAGGCGGC‑TTTTTATAGCCTCTGAATCGTATCGCTACCGTCGTGCTGCCAGAGTCGCCGAACTTGATCACtgt > 3:130637/1‑142 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAc > 4:331126/1‑146 (MQ=255) aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAc > 4:195818/1‑146 (MQ=255) aCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGa < 8:257736/149‑1 (MQ=255) aCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGa < 6:364315/149‑1 (MQ=255) ctttCGACTGTTTCAGTACGGCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGAt < 8:376791/147‑1 (MQ=255) cGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGAt < 8:370950/149‑1 (MQ=255) gTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGAt > 3:267976/1‑148 (MQ=255) gTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGAt > 1:306922/1‑148 (MQ=255) cGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTAt < 3:239708/148‑1 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCa < 6:250991/149‑1 (MQ=255) aCTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt > 3:402025/1‑149 (MQ=255) tCAGTACGTCGCCGACGAACCTCTCAATTCGTTGTCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCTCCTAACTTGATCACTGTGAGGACCAGATTATCATGCGTa < 3:263412/148‑1 (MQ=255) tCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa < 6:224162/148‑1 (MQ=255) aGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTaca < 3:400672/148‑1 (MQ=255) gTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACt > 8:187457/1‑149 (MQ=255) aCGTCGCCGACGAACCTCTCATTTCGATGGCTAAAACGGCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTc < 6:88528/148‑1 (MQ=255) cGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCaa < 6:331342/149‑1 (MQ=255) gTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAac < 6:278102/149‑1 (MQ=255) gTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAac < 3:195818/149‑1 (MQ=255) tCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAac > 1:74436/1‑148 (MQ=255) tCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTATTGCCTCGGATTCGTATCGGTAACGTCCTGATGCCAGAGTAGCCCAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACACAac > 2:361223/1‑148 (MQ=255) cgacgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCt < 5:134819/149‑1 (MQ=255) cgacgaACCTATCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCTTC‑TTTTTTTTTCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCt < 5:346366/149‑1 (MQ=255) tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGtt > 1:210574/1‑149 (MQ=255) tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGtt > 4:17717/1‑149 (MQ=255) ctcAATTCGTTGGCTAAAAAGCCGCCGTGTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc > 7:7931/1‑149 (MQ=255) ctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc > 5:192780/1‑149 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTTCCGTCGTGCTGCCAGTGTCGCCGAACTTGATGACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc > 5:385261/1‑149 (MQ=255) aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 1:283287/149‑1 (MQ=255) gTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGtt > 2:163756/1‑149 (MQ=255) ttGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc < 6:428054/143‑1 (MQ=255) ttGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGc > 5:428054/1‑143 (MQ=255) ttGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTg < 4:402025/149‑1 (MQ=255) ttGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTg > 3:338690/1‑149 (MQ=255) ggCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTTTCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTgg > 2:388595/1‑148 (MQ=255) ggCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTgg > 8:37064/1‑148 (MQ=255) gCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCCACCACCTGTGACTGTTCGGCCTGTTGGc > 6:183535/1‑148 (MQ=255) gCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc > 7:200010/1‑148 (MQ=255) gCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc < 6:424614/148‑1 (MQ=255) aaaaaaaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGGGTACACTCAACCACCTGGGACTGTTCGGCCTGTTGGc > 4:364875/4‑148 (MQ=255) aaaaaaaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc > 3:125853/4‑148 (MQ=255) cTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCa < 2:42652/149‑1 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATGACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCaa > 6:363552/1‑149 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAc > 7:16256/1‑149 (MQ=255) aaaaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAc < 4:338690/147‑1 (MQ=255) aaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACg > 1:424167/1‑149 (MQ=255) aGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGc < 2:144293/149‑1 (MQ=255) ccgccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCa < 1:163756/149‑1 (MQ=255) cccTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc < 8:200010/149‑1 (MQ=255) ctcAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTcc > 4:9947/1‑149 (MQ=255) | CAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTCC > NC_002947/6158836‑6159131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |