| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 650,845 | T→A | 9.0% | intergenic (‑134/+46) | aroQ‑I ← / ← dsbD‑I | type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 650,845 | 0 | T | A | 9.0% | 217.9 / 10.1 | 78 | intergenic (‑134/+46) | aroQ‑I/dsbD‑I | type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1 |
| Reads supporting (aligned to +/- strand): ref base T (37/34); new base A (2/5); total (39/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.64e-01 | |||||||||||
AGTAGCGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCGC > NC_002947/650698‑650992 | aGTAGCGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGATCGGATAttt < 1:253095/149‑1 (MQ=255) gTAGCGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATAttt > 6:115979/1‑148 (MQ=255) gTAGCGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCACGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATAttt > 1:287045/1‑148 (MQ=255) cGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATc < 7:105206/149‑1 (MQ=255) cGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATc < 1:335046/149‑1 (MQ=255) ttGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCg < 5:115979/149‑1 (MQ=255) ttccATCTGCGTATTCCTTGGATTTGTATGGCAATTCGACACAGCTCGGCGAGTGAGCCGTATAGCAACGGCAAGTGTCCAGTTCACGGCAATAGCCAGCACGATGTCCGAGGTTCGAGCGAAGTATTTGACCTGATATTTAAATCCg < 4:298174/146‑1 (MQ=255) gCCATCTGCGGATTCCTTGGATTTGTAGGGCATTTCGACTCAGCGCGGCGAGTGTGGCGTAAAGCTACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCgg < 5:232296/148‑1 (MQ=255) gCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCgg < 2:398298/148‑1 (MQ=255) gCCATCTGCGGATTCCTTGGATTGGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCgg < 8:188319/148‑1 (MQ=255) ccATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCGGt < 2:432546/148‑1 (MQ=255) ccATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCGGt < 6:48659/148‑1 (MQ=255) cATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCa > 6:3651/1‑149 (MQ=255) ggATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCAttt < 5:3651/149‑1 (MQ=255) aTTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCa < 6:235892/149‑1 (MQ=255) ttCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCAGTCACTCATTTCAg > 1:409492/1‑149 (MQ=255) cTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGAt > 6:381154/1‑149 (MQ=255) ttGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGAtt > 1:309855/1‑149 (MQ=255) ggATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGAtttt > 4:430428/1‑149 (MQ=255) gATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGAttttt > 8:74740/1‑149 (MQ=255) tttGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTcc > 6:35945/1‑149 (MQ=255) tGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCg < 1:230540/148‑1 (MQ=255) gggCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTc > 3:74484/1‑149 (MQ=255) ggCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGACCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTcg > 1:138055/1‑149 (MQ=255) aaTTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATCGCCAGCACGATGTCCGAGGGTCGCGCGAAGTATGTGACCCGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCgg < 3:156946/149‑1 (MQ=255) gACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGt > 1:221896/1‑149 (MQ=255) caGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTta‑‑ta < 2:309855/149‑1 (MQ=255) aGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCATTAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCgg > 4:113656/1‑139 (MQ=255) aGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCgg < 3:113656/139‑1 (MQ=255) gcgcGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGa > 3:117626/1‑149 (MQ=255) cggcgAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCg < 5:381154/149‑1 (MQ=255) gcgAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTACCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGAc > 7:264681/1‑149 (MQ=255) tgCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCcg < 5:431372/149‑1 (MQ=255) gCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCcgc > 4:52298/1‑149 (MQ=255) cGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCcgcg > 1:190192/1‑148 (MQ=255) aaaGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCAcg > 3:192784/1‑149 (MQ=255) cAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCAcgcgcg > 4:168574/1‑149 (MQ=255) aaCGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGt > 4:82994/1‑149 (MQ=255) aaCGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGt < 1:2490/149‑1 (MQ=255) aaGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAAt < 8:264681/149‑1 (MQ=255) gtCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCGGTCAc > 4:338282/1‑77 (MQ=37) gtCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATTTAAATATCCGGTCAc < 3:338282/77‑1 (MQ=37) tCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGaa > 1:250442/1‑107 (MQ=255) tCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGaa < 2:250442/107‑1 (MQ=255) tCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTgcg < 2:190192/149‑1 (MQ=255) cAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTgcgc < 2:7481/148‑1 (MQ=255) cAGCTCCCGGCAATATCCAGCACGATGTCCGAGGTTCGCTCGAAGTATGTGACCGGATATTTATATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGATTCTgagc < 2:287045/148‑1 (MQ=255) gTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGaa < 1:49445/149‑1 (MQ=255) cccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGATGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAtt > 5:84927/1‑148 (MQ=255) cccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAtt > 4:29585/1‑148 (MQ=255) cccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAtt < 2:138055/148‑1 (MQ=255) ccGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCa > 6:15741/1‑149 (MQ=255) cGGCAATAGCCAGCACGATGTCCGATGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCAc < 4:12412/149‑1 (MQ=255) gCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCg < 2:221896/149‑1 (MQ=255) aaTAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCgg > 6:19670/1‑148 (MQ=255) ccAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTcgc < 8:328931/84‑1 (MQ=255) cAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAt < 3:82994/149‑1 (MQ=255) aGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAtt > 6:360074/1‑135 (MQ=255) aGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAAtt < 5:360074/135‑1 (MQ=255) aGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtc > 4:195135/1‑149 (MQ=255) gCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGGTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtct < 1:254511/149‑1 (MQ=255) cACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtctc > 6:78648/1‑149 (MQ=255) cGATGTCCGAGGTGCGCGCGAAGTTTGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTATTTAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTAtctc < 1:126153/149‑1 (MQ=255) tCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAAt < 7:74740/148‑1 (MQ=255) cGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTT‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCAAATCAc > 7:268692/1‑149 (MQ=255) cGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCAc > 8:79276/1‑149 (MQ=255) cGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCAc > 6:383055/1‑149 (MQ=255) cGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCAc > 1:416635/1‑149 (MQ=255) ttCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGa > 1:370147/1‑148 (MQ=255) cgcgcgAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATc < 5:78648/148‑1 (MQ=255) ctcgAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGc < 5:35945/147‑1 (MQ=255) tgtgACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAAttt < 6:84927/148‑1 (MQ=255) tgtgACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTc > 3:278668/1‑149 (MQ=255) tgACCGGATTTAAATATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc > 1:272268/1‑149 (MQ=255) tgACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc > 3:191160/1‑149 (MQ=255) tgACCGGATATTTAAAACCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc < 3:430428/149‑1 (MQ=255) gACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGc < 4:278668/148‑1 (MQ=255) gACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCt > 8:360280/1‑149 (MQ=255) aCCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTg > 3:122457/1‑149 (MQ=255) cGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGcc > 2:178545/1‑149 (MQ=255) atTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCg > 1:263541/1‑149 (MQ=255) tttAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCgc < 1:175225/149‑1 (MQ=255) tttAAATCCAGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCgc < 2:409492/149‑1 (MQ=255) | AGTAGCGTTGCCATCTGCGGATTCCTTGGATTTGTAGGGCAATTCGACACAGCGCGGCGAGTGTGCCGTAAAGCAACGGCAAGTGTCCAGTTCCCGGCAATAGCCAGCACGATGTCCGAGGTTCGCGCGAAGTATGTGACCGGATATTTAAATCCGGTCACTCATTTCAGGATTTTTCCGAGCTCGCGGGAAGTTA‑‑TAGACCGACTTTGCCGCGCACGCGCGTCAGAATCTGCGCGAATTCACCGGCATTTATCTCGCCAATCACCCGATCAGCGGTAATTTCGCTGCCGTTCGC > NC_002947/650698‑650992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |