| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 688,789 | G→T | 5.2% | intergenic (+285/‑166) | PP_5446 → / → PP_0590 | hypothetical protein/ArsR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 688,789 | 0 | G | T | 5.2% | 245.2 / 3.2 | 77 | intergenic (+285/‑166) | PP_5446/PP_0590 | hypothetical protein/ArsR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (33/39); new base T (2/2); total (36/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.01e-01 | |||||||||||
GTGGAAGGTTGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAAC > NC_002947/688643‑688934 | gtgGAAGGTTGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAgg > 3:393526/1‑148 (MQ=255)gtgGAAGGTTGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAgg < 3:387640/148‑1 (MQ=255) tgGAAGGTTGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGc < 6:218643/148‑1 (MQ=255) tgGAAGGTTGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCa > 3:210178/1‑149 (MQ=255) ttGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAg < 6:160486/149‑1 (MQ=255) ttGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAg < 6:288924/149‑1 (MQ=255) tGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTATGCCTACCCatt > 8:150224/1‑147 (MQ=255) tgtgGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTATGCCTACCCATTgc > 2:390028/1‑147 (MQ=255) gtgGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCAt > 4:17819/1‑138 (MQ=255) gtgGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCAt < 3:17819/138‑1 (MQ=255) tgGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCTCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCTGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGttt < 7:248092/149‑1 (MQ=255) tgGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTATGCCTACCCATTgcaa < 1:390028/148‑4 (MQ=255) tgGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCATTGGttt > 8:361881/1‑149 (MQ=255) tgGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGttt < 1:434308/149‑1 (MQ=255) ggCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGtttt > 1:95722/1‑148 (MQ=255) gCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTATGCCTACCCATTgcaagcag < 7:150224/149‑8 (MQ=255) gCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTc < 8:194402/149‑1 (MQ=255) ccACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCg < 6:275497/149‑1 (MQ=255) ccACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCg < 1:190319/149‑1 (MQ=255) cacaTCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGt > 6:137325/1‑149 (MQ=255) aTCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCAt < 1:389754/149‑1 (MQ=255) aTCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCAt < 1:184666/149‑1 (MQ=255) taaTGGCTGCAAGTTTGTTGTCATCAAGAAGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGa < 6:301747/145‑1 (MQ=255) aaaTGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGa < 4:370829/146‑1 (MQ=255) aaaTGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGa < 4:1027/146‑1 (MQ=255) gCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTacgacg < 1:363482/149‑1 (MQ=255) cTGCAAGTTTGTTTTCATCAAGATTTTTCATGGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACgg < 3:13711/149‑1 (MQ=255) cTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGTGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACgg > 4:411720/1‑149 (MQ=255) cAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGTGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCa < 3:411720/148‑1 (MQ=255) cAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCAc < 4:393526/149‑1 (MQ=255) aaGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCAcc > 5:94921/1‑149 (MQ=255) tttgtttTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTgg > 1:193860/1‑149 (MQ=255) ttgtttTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGgt > 2:142110/1‑149 (MQ=255) ttgtttTCATCAAGATGTTTCAGCGCATTTGTGTGCGTGTACCGGTGCCTAGTTTGACTTGGTTCCGGGGCGTTTTCGAACCCGCTTCGCTGCTTGCAATGGCTACGCATACCCAGAGGTTTTTCGACATCAGTACGACGGCAACTGgt > 4:296401/1‑149 (MQ=255) ttttCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGgtcgt > 6:201641/1‑149 (MQ=255) tttCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTAGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGgtcgtc > 6:86803/1‑149 (MQ=255) atcaAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGa < 2:95722/148‑1 (MQ=255) atcaAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGAc > 1:118831/1‑149 (MQ=255) tcaAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGc < 6:159488/133‑1 (MQ=255) tcaAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGc > 5:159488/1‑133 (MQ=255) tcaAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGAcc > 4:428833/1‑149 (MQ=255) tcaAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGAcc > 6:420636/1‑149 (MQ=255) aaGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCCGTGGTTTTTCGTCATGCGTACGACGGCACCTGGTCGTCTGACCgg > 8:85867/1‑149 (MQ=255) aaGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCgg > 2:122763/1‑149 (MQ=255) tttCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGttt < 4:98675/148‑1 (MQ=255) tttCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGttt < 1:339401/148‑1 (MQ=255) tCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGAACGACGGCACCTGGTCGTCTGACCGGCGTTTTTc > 6:3813/1‑149 (MQ=255) aGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTg < 1:436674/149‑1 (MQ=255) gcgcATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGc > 5:173543/1‑149 (MQ=255) gcgcATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGc > 1:403590/1‑149 (MQ=255) gcgcATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTGTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGc < 3:258232/149‑1 (MQ=255) ctcATTTGTGGGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCg < 5:201641/147‑1 (MQ=255) aTTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCt > 6:283214/1‑149 (MQ=255) tttGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGCACGGCGTTTTTCTGCgggt > 6:49513/1‑146 (MQ=255) tgGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTg > 5:55385/1‑149 (MQ=255) ggTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTgg < 3:296401/148‑1 (MQ=255) ttGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTg > 3:178401/1‑149 (MQ=255) tttGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCa < 6:94921/149‑1 (MQ=255) tttGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGACATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTAATACTGGCGAGCCAGGCCAGTGACa > 7:405612/1‑149 (MQ=255) gACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGc < 2:118831/148‑1 (MQ=255) cTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGc > 5:11864/1‑146 (MQ=255) cTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCgag < 2:403590/149‑1 (MQ=255) cGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCt < 2:193860/148‑1 (MQ=255) ttttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTgg > 1:281576/1‑148 (MQ=255) gtttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCAGACCCAGGGGTGTTTCGTCCTGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATCCTGGCGAGCCAGGCCAGTGCCAGCGCGAGGCGCTTCCCTGGc > 1:281573/2‑149 (MQ=255) ttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCa < 5:283214/148‑1 (MQ=255) ttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGCACGACGGCACGTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCa < 5:3813/148‑1 (MQ=255) gCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTgg > 6:177748/1‑146 (MQ=255) gCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTgg < 5:177748/146‑1 (MQ=255) gCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCa < 7:361881/149‑1 (MQ=255) gCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCa < 4:210178/149‑1 (MQ=255) cTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCAt > 1:114754/1‑149 (MQ=255) ctTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATccc > 3:146590/1‑149 (MQ=255) ctTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATc < 6:173543/147‑1 (MQ=255) ctTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGAACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATccc < 5:369957/149‑1 (MQ=255) gCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATcccc < 3:259039/147‑1 (MQ=255) gCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCAAGCGAGAGGCGCTTCCCGGGCAGGGGGGGCCGTCGCaggccc > 4:259039/1‑142 (MQ=255) cAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCAcc > 4:173167/1‑149 (MQ=255) gTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAAc < 5:49513/149‑1 (MQ=255) | GTGGAAGGTTGCTGTGGGCCACATCTGAAATGGCTGCAAGTTTGTTTTCATCAAGATGTTTCAGCGCATTTGTGTGGGTGTACCGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAAC > NC_002947/688643‑688934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |