BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	782,852	C→A	5.2%	R1025L (CGC→CTC)	PP_0672 ←	sensory box protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	782,852	0	C	A	5.2%	316.3 / 5.6	97	R1025L (CGC→CTC)	PP_0672	sensory box protein
Reads supporting (aligned to +/- strand): ref base C (45/47); new base A (2/3); total (47/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.95e-01

Only 100 of 104 total aligned reads displayed.

ATCACCGGGATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGGCTCAGCTCACTGCCATCCTG  >  NC_002947/782705‑783000

aTCCCCGCGACGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGgcg                                                                                                                                                     <  8:387916/149‑1 (MQ=255)

 tCACCGGGTTGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGgcgc                                                                                                                                                    <  1:184908/149‑1 (MQ=255)

   acagggATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTAGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAg                                                                                                                                                  >  6:121222/4‑149 (MQ=255)

    ccGGGATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCGCCATGCCATGGAGCAga                                                                                                                                                 <  8:346500/149‑2 (MQ=255)

     cGGGATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGt                                                                                                                                                >  7:111998/1‑149 (MQ=255)

      gggATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCGCCATGCCATGGAGCAgaac                                                                                                                                               <  2:182153/149‑4 (MQ=255)

       ggATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCCTCTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCGCCATGCCATGGAGCAgaac                                                                                                                                               <  1:130642/149‑4 (MQ=255)

       ggATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCg                                                                                                                                              >  8:190679/1‑149 (MQ=255)

          tGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCtt                                                                                                                                           <  6:110544/149‑1 (MQ=255)

             aGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGGATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTc                                                                                                                                         >  5:338226/1‑148 (MQ=255)

             aGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTcc                                                                                                                                        <  2:148442/149‑1 (MQ=255)

              gTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGGTCCATGGCATGGCGCAGGTCGCTTTCCa                                                                                                                                       <  1:246451/149‑1 (MQ=255)

              gTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCAGCTCCATGGCATGGCGCAGGTCGCTTTCCa                                                                                                                                       <  1:39303/149‑1 (MQ=255)

                 gCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGc                                                                                                                                     <  6:245327/148‑1 (MQ=255)

                 gCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCt                                                                                                                                    >  8:171172/1‑149 (MQ=255)

                  cccGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTc                                                                                                                                   <  6:113025/149‑1 (MQ=255)

                      gcggcACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAgg                                                                                                                               <  6:181612/149‑1 (MQ=255)

                      gcggcACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAgg                                                                                                                               <  7:313070/149‑1 (MQ=255)

                       cggcACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGgc                                                                                                                              <  3:194303/149‑1 (MQ=255)

                             cAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTc                                                                                                                          >  1:176420/1‑147 (MQ=255)

                              aGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAg                                                                                                                       >  3:249193/1‑149 (MQ=255)

                               ggCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAgg                                                                                                                      >  2:203925/1‑149 (MQ=255)

                                gCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAggg                                                                                                                     >  7:173040/1‑149 (MQ=255)

                                      ggtcgggtGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTgg                                                                                                               >  4:161110/1‑149 (MQ=255)

                                          gggtGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGtt                                                                                                           <  1:424785/149‑1 (MQ=255)

                                          gggtGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGtt                                                                                                           <  1:424766/149‑1 (MQ=255)

                                            gtGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCa                                                                                                         >  6:29356/1‑149 (MQ=255)

                                                cGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTc                                                                                                     <  6:148581/149‑1 (MQ=255)

                                                cGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTACAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCAttt                                                                                                      <  5:162915/148‑1 (MQ=255)

                                                 gCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCg                                                                                                    >  1:281901/1‑149 (MQ=255)

                                                 gCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCg                                                                                                    <  3:279276/149‑1 (MQ=255)

                                                 gCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTACC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCg                                                                                                    <  7:385598/149‑1 (MQ=255)

                                                   cAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGc                                                                                                  <  6:273645/149‑1 (MQ=255)

                                                    aGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGcc                                                                                                 <  5:20670/149‑1 (MQ=255)

                                                    aGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGcc                                                                                                 >  7:400243/1‑149 (MQ=255)

                                                      cgcAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTg                                                                                               <  4:429817/149‑1 (MQ=255)

                                                      cgcAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTg                                                                                               <  8:173040/149‑1 (MQ=255)

                                                       gcagcaGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTATTAGACGATGAAGTCGTTCTGCTACATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTgg                                                                                              >  3:248572/1‑149 (MQ=255)

                                                       gcagcaGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTgg                                                                                              <  4:249193/149‑1 (MQ=255)

                                                        cagcagCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGt                                                                                             <  2:281901/149‑1 (MQ=255)

                                                         agcagcGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCg                                                                                                             <  1:252512/132‑1 (MQ=255)

                                                         agcagcGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCg                                                                                                             >  2:252512/1‑132 (MQ=255)

                                                         agcagcGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCg                                                                                                             <  1:259125/132‑1 (MQ=255)

                                                           cagcGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAg                                                                                           >  7:87396/1‑148 (MQ=255)

                                                             gcgcTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCAttt                                                                                                      >  1:33172/1‑135 (MQ=255)

                                                             gcgcTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCAttt                                                                                                      <  2:33172/135‑1 (MQ=255)

                                                                cTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGtt                                                                                                           <  4:256807/127‑1 (MQ=255)

                                                                cTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGtt                                                                                                           >  3:256807/1‑127 (MQ=255)

                                                                cTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTgg                                                                                     <  1:197552/149‑1 (MQ=255)

                                                                   cGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTTGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCTCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGaa                                                                                   <  5:121222/148‑1 (MQ=255)

                                                                     gcgcCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAgtt                                                                                >  6:94884/1‑149 (MQ=255)

                                                                      cgcCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAgttg                                                                               <  3:161110/149‑1 (MQ=255)

                                                                           gTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCtt                                                                          <  2:176420/149‑1 (MQ=255)

                                                                           gTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCtt                                                                          <  5:424493/149‑1 (MQ=255)

                                                                                 cgcTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCcgcg                                                                    <  8:111998/149‑1 (MQ=255)

                                                                                    ttGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTc                                                                 >  2:371029/1‑149 (MQ=255)

                                                                                    ttGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTc                                                                 <  5:29356/149‑1 (MQ=255)

                                                                                    ttGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTc                                                                 >  4:234432/1‑149 (MQ=255)

                                                                                      gCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCt                                                               >  1:190021/1‑149 (MQ=255)

                                                                                          gTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTAGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTgg                                                            >  7:52173/1‑149 (MQ=255)

                                                                                           tCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGc                                                           <  5:173096/149‑1 (MQ=255)

                                                                                           tCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGc                                                           <  5:368158/149‑1 (MQ=255)

                                                                                           tCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGc                                                           >  6:13246/1‑149 (MQ=255)

                                                                                              ccgcTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTg                                                        >  6:395080/1‑149 (MQ=255)

                                                                                                 cTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTa                                                     <  4:346245/149‑1 (MQ=255)

                                                                                                   gAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTACAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTAc                                                    <  1:371029/148‑1 (MQ=255)

                                                                                                        gCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCg                                              >  8:150949/1‑149 (MQ=255)

                                                                                                         cGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCg                                              <  5:23753/148‑1 (MQ=255)

                                                                                                             tGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTc                                         >  7:265021/1‑149 (MQ=255)

                                                                                                                tAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGc                                      <  2:358735/149‑1 (MQ=255)

                                                                                                                    agagGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGAGCTACAGGGCGCTGGGGTTAATTTCGGCCTGGTAGAACTGGATGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGttc                                  >  7:121798/1‑149 (MQ=255)

                                                                                                                       ggATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTGCTTGGCGTGGTACATGGCGGTGTCGGCGttcttc                               <  5:69275/149‑1 (MQ=255)

                                                                                                                        gATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTTGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTtca                              <  1:203925/149‑1 (MQ=255)

                                                                                                                        gATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTtca                              >  6:217606/1‑149 (MQ=255)

                                                                                                                        gATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTtca                              >  3:139119/1‑149 (MQ=255)

                                                                                                                          tGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGttc                                  >  2:289188/1‑143 (MQ=255)

                                                                                                                          tGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGttc                                  <  1:289188/143‑1 (MQ=255)

                                                                                                                             aTTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAg                                                                                  >  4:263153/1‑92 (MQ=255)

                                                                                                                             aTTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAg                                                                                  <  3:263153/92‑1 (MQ=255)

                                                                                                                             aTTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGc                         >  7:231479/1‑149 (MQ=255)

                                                                                                                             aTTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGc                         >  5:386553/1‑149 (MQ=255)

                                                                                                                             aTTCGGTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGc                         <  4:263373/149‑1 (MQ=255)

                                                                                                                              ttCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCt                        >  7:101726/1‑149 (MQ=255)

                                                                                                                                 gTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTgg                      <  5:13246/148‑1 (MQ=255)

                                                                                                                                 gTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGgc                     >  1:129188/1‑149 (MQ=255)

                                                                                                                                  ttCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCcgc                                                                     <  6:204815/100‑1 (MQ=255)

                                                                                                                                  ttCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCcgc                                                                     >  5:204815/1‑100 (MQ=255)

                                                                                                                                  accTGCGCCATGCCATGGAGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGgct                    >  2:362917/3‑149 (MQ=255)

                                                                                                                                  acatGCGCCATGCCATGGAGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGgct                    >  1:99409/4‑149 (MQ=255)

                                                                                                                                      gCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGAACATGGCGGTGTCGGCGTTCTTCATCAGCTGgctcag                 >  7:100931/1‑148 (MQ=255)

                                                                                                                                       cTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTg                                                                         <  4:423923/91‑1 (MQ=255)

                                                                                                                                       cTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTg                                                                         >  3:423923/1‑91 (MQ=255)

                                                                                                                                       cTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGgctcagct               >  8:134694/1‑149 (MQ=255)

                                                                                                                                        tCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGgctcagct               >  5:88747/1‑148 (MQ=255)

                                                                                                                                        tCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGgctcagct               >  3:119831/1‑148 (MQ=255)

                                                                                                                                          catggcatggCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGGCTCAGCTCAc            >  4:188860/1‑149 (MQ=255)

                                                                                                                                               catggcGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGGCTCAGCTCACTGCCa       >  5:50873/1‑149 (MQ=255)

                                                                                                                                               catggcGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGGCTCAGCTCACTGCCa       <  2:129188/149‑1 (MQ=255)

                                                                                                                                                atggcGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGGCTCAGCTCACTGCCAt      >  3:407834/1‑149 (MQ=255)

                                                                                                                                                    cgcAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTCGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGGCTCAGCTCACTGCCATCCTg  <  2:190021/149‑1 (MQ=255)

ATCACCGGGATGAAGTCGCCCGGCGGCACCAGGCCTCGGGTCGGGTGACGCCAGCGCAGCAGCGCTTCGGCGCCGGTCAGGCGCTTGCC‑GTCGCCGCTGAACTGCGGCTGGTAATAGAGGATGAATTCGTTCTGCTCCATGGCATGGCGCAGGTCGCTTTCCAGCTCCAGGCGCTCCAGGGCGCTGGCGTTCATTTCGGCCTGGTAGAACTGGAAGTTGTTCTTGCCGCGCTCCTTGGCGTGGTACATGGCGGTGTCGGCGTTCTTCATCAGCTGGCTCAGCTCACTGCCATCCTG  >  NC_002947/782705‑783000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`