BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	104,876	G→C	6.7%	P345P (CCG→CCC)	PP_0099 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	104,876	0	G	C	6.7%	372.2 / 11.2	115	P345P (CCG→CCC)	PP_0099	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (56/51); new base C (4/4); total (60/55)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01

Only 100 of 118 total aligned reads displayed.

AGCTGTATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCCAGTTCCCGCCTTT  >  NC_002947/104728‑105022

aGCTGTATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCg                                                                                                                                                    <  2:64112/149‑1 (MQ=255)

aGCTGTATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCg                                                                                                                                                    >  1:427518/1‑149 (MQ=255)

    gTATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTg                                                                                                                                                >  6:22500/1‑149 (MQ=255)

     tATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGt                                                                                                                                                 <  5:186215/147‑1 (MQ=255)

     tATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGt                                                                                                                                                 <  2:46827/147‑1 (MQ=255)

     tATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTg                                                                                                                                                <  2:146349/148‑1 (MQ=255)

        gACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTggg                                                                                                                                              >  1:163592/1‑147 (MQ=255)

           aGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGAt                                                                                                                                         >  1:273093/1‑149 (MQ=255)

            gCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCCGGTGGGCaaaac                                                                                                                                        <  3:138067/149‑5 (MQ=255)

            gCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCCGGTGGGCaaaac                                                                                                                                        <  7:109858/149‑5 (MQ=255)

             ccGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATgg                                                                                                                                       <  7:240004/149‑1 (MQ=255)

             ccGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGCATTGCTCGGCGTTTTGCCCCCCGGGAGGGCAGATgg                                                                                                                                       >  6:355471/1‑149 (MQ=255)

                 ttCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCt                                                                                                                                   <  6:109906/149‑1 (MQ=255)

                 ttCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCCGGTGGGCaaaac                                                                                                                                        <  3:25821/144‑5 (MQ=255)

                 ttCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCCGGTGGGCaaaac                                                                                                                                        >  4:25821/1‑140 (MQ=255)

                     gCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTc                                                                                                                               >  6:76052/1‑149 (MQ=255)

                     gCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTc                                                                                                                               <  1:173031/149‑1 (MQ=255)

                      cgggcgcATGCGGGGTGAAGGAGGATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCATTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCt                                                                                                                              <  8:326993/146‑1 (MQ=255)

                      cGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCt                                                                                                                              <  5:22500/149‑1 (MQ=255)

                        tGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGa                                                                                                                            <  2:427518/149‑1 (MQ=255)

                        tGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGa                                                                                                                            <  5:152234/149‑1 (MQ=255)

                           gcATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACAt                                                                                                                         <  4:15054/149‑1 (MQ=255)

                            cATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGgcg                                                                                                                                     >  8:382603/1‑136 (MQ=255)

                             aTGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATg                                                                                                                        >  1:102925/1‑148 (MQ=255)

                                 gtggtgAAGGAGTATTTGCCGAGTTGCCGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAaccc                                                                                                                   >  5:53626/1‑149 (MQ=255)

                                       aaGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAaccccacccc                                                                                                             >  2:275572/1‑149 (MQ=255)

                                       aaGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAaccccacccc                                                                                                             >  5:232631/1‑149 (MQ=255)

                                        aGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCAccccc                                                                                                            >  6:422251/1‑149 (MQ=255)

                                          gAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGtt                                                                                                                                >  7:231849/1‑127 (MQ=255)

                                          gAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGtt                                                                                                                                <  8:231849/127‑1 (MQ=255)

                                          gAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCca                                                                                                          <  5:422251/149‑1 (MQ=255)

                                              aTTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAgg                                                                                                      >  5:438669/1‑149 (MQ=255)

                                               tttGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAggg                                                                                                     <  8:311683/149‑1 (MQ=255)

                                                   ccGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCt                                                                                                 >  4:144670/1‑149 (MQ=255)

                                                     gAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTgc                                                                                               <  4:19986/149‑1 (MQ=255)

                                                        ttGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCTCACCCCCCACAGGGGGCTGCGCa                                                                                            >  2:423924/1‑149 (MQ=255)

                                                        ttGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCa                                                                                            <  7:358955/149‑1 (MQ=255)

                                                        ttGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCa                                                                                            <  1:281800/149‑1 (MQ=255)

                                                          gCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCa                                                                                            <  1:288762/147‑1 (MQ=255)

                                                          gCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCCGGTGGGc                                                                                                                                             >  5:97889/1‑98 (MQ=255)

                                                          gCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCCGGTGGGc                                                                                                                                             <  6:97889/98‑1 (MQ=255)

                                                          gCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCAACCGGGTGGGCAGATGGAGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGAGCa                                                                                            >  2:288762/1‑147 (MQ=255)

                                                           cTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTg                                                                                         >  6:46297/1‑149 (MQ=255)

                                                           cTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTg                                                                                         <  1:261510/149‑1 (MQ=255)

                                                                gcAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTgcg                                                                                              <  1:269046/139‑1 (MQ=255)

                                                                gcAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTgcg                                                                                              >  2:269046/1‑139 (MQ=255)

                                                                gcAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTcac                                                                                    <  6:438669/149‑1 (MQ=255)

                                                                gcAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTca                                                                                     >  8:203198/1‑148 (MQ=255)

                                                                 cAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTg                                                                                         <  2:100724/143‑1 (MQ=255)

                                                                 cAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTg                                                                                         >  1:100724/1‑143 (MQ=255)

                                                                 cAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTcac                                                                                    >  1:22119/1‑148 (MQ=255)

                                                                    cgcTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACg                                                                                >  2:206448/1‑149 (MQ=255)

                                                                    cgcTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGCTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCACACAGGTGGCTGCGCATAGCTCACAACg                                                                                >  4:20689/1‑149 (MQ=255)

                                                                      cTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCAcccccc                                                                                                           <  8:384073/120‑1 (MQ=255)

                                                                      cTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCAcccccc                                                                                                           >  7:384073/1‑120 (MQ=255)

                                                                       tttGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCaa                                                                             >  4:305372/1‑149 (MQ=255)

                                                                       tttGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCaa                                                                             <  5:46297/149‑1 (MQ=255)

                                                                         tggcAAGGCAATGAAACGGCTTGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAAc                                                                            <  3:248731/145‑1 (MQ=255)

                                                                         tGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCaa                                                                             <  3:144670/147‑1 (MQ=255)

                                                                          gCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAggg                                                                                                     <  5:319534/122‑1 (MQ=255)

                                                                          gCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAggg                                                                                                     >  6:319534/1‑122 (MQ=255)

                                                                          gCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACt                                                                           >  1:46879/1‑148 (MQ=255)

                                                                           ccAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACtaa                                                                         >  1:12957/1‑149 (MQ=255)

                                                                           ccAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACta                                                                          <  5:399952/148‑1 (MQ=255)

                                                                               ggCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACtaataa                                                                      >  5:422615/1‑148 (MQ=255)

                                                                                 cAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATaacaa                                                                   <  2:233722/149‑1 (MQ=255)

                                                                                  aaTGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATaccacc                                                                  >  8:180254/1‑147 (MQ=255)

                                                                                  aaTGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATaacaac                                                                  <  2:7693/149‑1 (MQ=255)

                                                                                  aaTGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATaacaac                                                                  <  6:422615/149‑1 (MQ=255)

                                                                                   aTGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAAc                                                                            <  3:55900/138‑1 (MQ=255)

                                                                                    tGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAAcc                                                                 >  5:362358/1‑148 (MQ=255)

                                                                                      aaaCGGCTGGATTTCGAAGGGCTCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCaa                                                               <  6:232631/148‑1 (MQ=255)

                                                                                      aaaCGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCaa                                                               >  6:121904/1‑148 (MQ=255)

                                                                                        aCGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCaataa                                                            <  2:102925/149‑1 (MQ=255)

                                                                                              ggATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAATTAATAACAACCAATAATTg                                                         >  1:188335/1‑146 (MQ=255)

                                                                                              ggATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAATTAATAACAACCAATAATTg                                                         <  2:205084/146‑1 (MQ=255)

                                                                                              ggATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAATTAATAACAACCAATAATTg                                                         <  2:188335/146‑1 (MQ=255)

                                                                                                 tttCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTaa                                                   >  5:89840/1‑149 (MQ=255)

                                                                                                    cGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCt                                                                                       <  3:350719/110‑1 (MQ=255)

                                                                                                    cGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCt                                                                                       >  4:350719/1‑110 (MQ=255)

                                                                                                    cGAAGGGCGCGAGGCGCAGGAGCTCGATTGCTCGGCGTTTTGCCCACCGGGTCGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCCCTAATa                                                 >  6:208006/1‑148 (MQ=255)

                                                                                                     gAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACa                                               >  3:147537/1‑149 (MQ=255)

                                                                                                     gAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCGGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACa                                               <  5:417920/149‑1 (MQ=255)

                                                                                                          gcgcGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTg                                          <  3:305372/149‑1 (MQ=255)

                                                                                                            gcgAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGTTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTgg                                         >  7:390033/1‑148 (MQ=255)

                                                                                                                   gcAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTTGGAAGATGGCGCTTTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGAt                                 <  5:355471/149‑1 (MQ=255)

                                                                                                                   gcAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGAt                                 <  4:368648/149‑1 (MQ=255)

                                                                                                                          cTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCAtt                                                                                          >  6:41836/1‑85 (MQ=255)

                                                                                                                              aTTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCt                      <  5:7617/149‑1 (MQ=255)

                                                                                                                                 gCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCtat                    >  4:80232/1‑148 (MQ=255)

                                                                                                                                    cGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAGCCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGc                                                                               <  5:118592/86‑1 (MQ=255)

                                                                                                                                    cGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAGCCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGc                                                                               >  6:118592/1‑86 (MQ=255)

                                                                                                                                     ggCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATc                >  4:152572/1‑148 (MQ=255)

                                                                                                                                      gCGTTTTGACCACCGGTTGGGAAGATGGCGCTTTTCTGAAATGAACCCCACCCCCCACAGGGGGATGCGCATTGATAACAAAGCAACTAATAACAAACAATAATTCCGCTAATACATATTTGCAACTAATGTTTTTTTGCTATTATc                >  2:372850/1‑147 (MQ=255)

                                                                                                                                       ccatctGCCCACCCGGTGGGCAGATGGCGCTGTTCTGACATGAGCCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCCAg             >  1:82691/6‑149 (MQ=255)

                                                                                                                                         atctGCCCACCCGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCCAGtt           >  4:400805/4‑149 (MQ=255)

                                                                                                                                             gCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCCAGTTCCCg       >  8:179748/1‑149 (MQ=255)

                                                                                                                                              cccACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCCAGTTCCCGc      >  5:334929/1‑149 (MQ=255)

                                                                                                                                                 aCCGGGTGGGTAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCAAGTTCCAGCCtt   >  8:149288/1‑149 (MQ=255)

                                                                                                                                                  cagggTGGGCAGATGGCGCTGTTCTTACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCCAGTTCCCGCCttt  <  3:20689/147‑1 (MQ=255)

AGCTGTATGACAGCCGGTTCGGCGTGCGCATGCGTGGTGAAGGAGTATTTGCCGAGTTGCTGGCGCAGCGCTTTGCCAAGGCAATGAAACGGCTGGATTTCGAAGGGCGCGAGGCGCAGGAGCTGGATTGCTCGGCGTTTTGCCCACCGGGTGGGCAGATGGCGCTGTTCTGACATGAACCCCACCCCCCACAGGGGGCTGCGCATTGCTCACAACGCAACTAATAACAACCAATAATTGCGCTAATACATATTGGCAACTGATGTTTTTTTGCTATTATCCAGTTCCCGCCTTT  >  NC_002947/104728‑105022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`