| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 895,210 | G→C | 5.5% | intergenic (+50/+14) | PP_0777 → / ← PP_0778 | glutathione peroxidase/group 1 family glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 895,210 | 0 | G | C | 5.5% | 235.0 / 3.1 | 72 | intergenic (+50/+14) | PP_0777/PP_0778 | glutathione peroxidase/group 1 family glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (35/33); new base C (2/2); total (37/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.86e-01 | |||||||||||
GTGGGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCATTCAG > NC_002947/895065‑895358 | gtggGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCgcgggcg > 1:377082/1‑149 (MQ=255)gtggGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCgcgg < 3:214060/146‑1 (MQ=255) gCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGg‑cgc > 5:397949/1‑149 (MQ=255) cAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCt > 5:407537/1‑149 (MQ=255) cAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCt < 8:267509/149‑1 (MQ=255) aaGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTg > 2:415865/1‑149 (MQ=255) aaGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTg < 2:324468/149‑1 (MQ=255) aGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTgg < 6:397949/149‑1 (MQ=255) ggATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGa < 1:379238/149‑1 (MQ=255) aTGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGAtc < 1:333730/149‑1 (MQ=255) aTGGCCGGGTGCTGGCGCGTTTCGCGCCGCGCAAGGCGCCGGATGACCCAGCGGTTGTGCAGGCCATCGACAAACCCCTGGCCTGAATAGTGCCTTAGCGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGAt < 1:108475/149‑1 (MQ=255) cGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTca > 4:292969/1‑147 (MQ=255) cGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCCAGCGCCGCCCGCGCGG‑CACTCGATCTcaca < 1:317442/149‑1 (MQ=38) gggTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGTGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAg < 2:274502/149‑1 (MQ=255) gTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGgc < 3:18833/149‑1 (MQ=255) gTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGgc < 7:24476/149‑1 (MQ=255) gCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGgcgc < 3:23604/149‑1 (MQ=255) tGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTg < 8:362784/149‑1 (MQ=255) gcgcGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTg < 6:16281/147‑1 (MQ=255) gcgcGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGc > 4:361979/1‑148 (MQ=255) gcgcGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCCAGCGCCGCCCGCGCGG‑CACTCGATCTca < 2:123817/138‑1 (MQ=38) gcgcGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCCAGCGCCGCCCGCGCGG‑CACTCGATCTca > 1:123817/1‑138 (MQ=38) gcgTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCaaa < 2:377082/149‑1 (MQ=255) cgTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCaaa > 8:312229/1‑148 (MQ=255) cgTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAAc < 6:407537/149‑1 (MQ=255) gTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTgg > 5:100675/1‑128 (MQ=255) gTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTgg < 6:100675/128‑1 (MQ=255) gccgcGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCCGCTGGATCTCACAGGCGCTGCAAACATTg < 1:40157/146‑1 (MQ=255) ccgcGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTgcg > 7:201622/1‑146 (MQ=255) gcgcACGGCGCCGTTTGACCCAGCGGTGGTGCAGGCAAGCCTGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGTATCTCAAAGGCGCTGCAAACATTGCGCAGaa < 8:201622/149‑1 (MQ=255) cACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGc < 1:112634/149‑1 (MQ=255) cgcCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGc > 2:17191/1‑149 (MQ=255) ctgATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGt < 7:312229/147‑1 (MQ=255) cGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCg > 5:46810/1‑148 (MQ=255) gATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTCGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAg < 5:379922/149‑1 (MQ=255) ccAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAg < 6:2196/149‑1 (MQ=255) aGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGt > 1:303171/1‑149 (MQ=255) tggtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGcca < 2:303171/149‑2 (MQ=255) tggtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCg < 1:17191/149‑1 (MQ=255) cAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTg > 3:335588/1‑111 (MQ=255) cAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTg < 4:335588/111‑1 (MQ=255) cAGGCCATAGAGAAAGCCCTGGCCTGAAGACTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATAGCGCAGAACGCCCAGCCGTAGCACCAGGATGCCggactt > 5:47093/1‑145 (MQ=255) gagaAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGtt > 5:276148/1‑147 (MQ=255) gagaAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCa < 6:46810/149‑1 (MQ=255) agaAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAg < 8:93829/149‑1 (MQ=255) aaaGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGa > 7:7250/1‑148 (MQ=255) aaGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGAt < 3:361979/148‑1 (MQ=255) cTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCt > 2:422050/1‑149 (MQ=255) cTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAAc > 2:289790/1‑149 (MQ=255) cTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAAc < 3:292969/149‑1 (MQ=255) aaGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGt > 4:109833/1‑149 (MQ=255) gTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGa > 1:21901/1‑149 (MQ=255) tGATGTTTTGGCAACTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCgg > 1:161870/1‑149 (MQ=255) gTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAg > 2:299361/1‑149 (MQ=255) gTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAg > 4:169905/1‑149 (MQ=255) ttttGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGc > 8:6290/1‑149 (MQ=255) gCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTgg > 3:123582/1‑149 (MQ=255) gCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTgg > 3:411702/1‑149 (MQ=255) gCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTgg > 4:324308/1‑149 (MQ=255) gCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTgg > 7:312430/1‑149 (MQ=255) cACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTggc > 3:406616/1‑149 (MQ=255) cACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTggc < 4:406616/149‑1 (MQ=255) aCCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTggcg > 3:27787/1‑149 (MQ=255) aCCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTggcg > 3:74369/1‑149 (MQ=255) cTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTggcggc > 7:197937/1‑149 (MQ=255) agaTCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCa < 5:198835/149‑1 (MQ=255) gaTCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCAt < 2:259700/149‑1 (MQ=255) gaTCCAGCGCCGCCCGCGCGG‑CACTCGATCTCACAGGTGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCAt > 7:151554/1‑149 (MQ=38) tGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGACATGCTGTcg < 2:161870/149‑1 (MQ=255) ccGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGc < 2:23510/138‑1 (MQ=255) ccGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGc > 1:23510/1‑138 (MQ=255) cgcgcgGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTcgcg > 8:336801/1‑148 (MQ=255) gcgcgGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCa > 2:70740/1‑149 (MQ=255) ccgcgGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGCCATCCCCTCTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCa > 2:181943/2‑149 (MQ=255) gggcgg‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCATTCa < 8:197937/149‑1 (MQ=255) ggcgg‑cGCTGGATCTGACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCATTCAg < 2:318323/149‑1 (MQ=255) ggcgg‑cGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCATTCAg < 8:312430/149‑1 (MQ=255) ggcgg‑cGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCATTCAg < 3:169905/149‑1 (MQ=255) | GTGGGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGCGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGA‑CGTGATGTTTTGGCACCTGTGAGATCGAGTGCCGCGCGGGCGG‑CGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCTGTCGCGCATTCAG > NC_002947/895065‑895358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |