| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,007,574 | A→T | 8.5% | intergenic (+74/+16) | PP_0867 → / ← yehX | FecA‑like outer membrane receptor/ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,007,574 | 0 | A | T | 8.5% | 239.1 / 7.2 | 81 | intergenic (+74/+16) | PP_0867/yehX | FecA‑like outer membrane receptor/ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (39/35); new base T (4/3); total (43/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACAACAATGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCAACACTGGC > NC_002947/1007433‑1007722 | acaacaATGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAgcgc < 6:185579/148‑1 (MQ=255) aacaaTGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCTTTGCGcccc > 7:128510/1‑149 (MQ=255) aacaaTGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTGGGGTTTTGATCCGAGACTGTCGGGGACGCGTTGGGGCCCGTCGCTCGCGCGTGTAGGGGCGGGGTTACCCGCGAGGGGGCGCTTTGCGcccc > 2:280871/1‑149 (MQ=255) aaTGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCTTTGCGccccttc < 8:128510/149‑4 (MQ=255) aaTGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCgg < 7:15367/149‑1 (MQ=255) tGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGc > 2:105207/1‑148 (MQ=255) gCCGGCCTTTACGTGGGGTAGCCTCTGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTTCGGCCCTTCGCTCGCTCTTGTAGGAGCGTGTTTACCCGCGAAGGGGCGCTTTGCGccccttcgc < 4:310924/148‑6 (MQ=255) ccGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCCGGCCAGTGTTGGGTGTTGATCCGCGCCTGGCGGGGCCGCTTTGCGGCCCTGCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAGGGGGCGCTTTGCGccccttcgcg < 1:280871/148‑7 (MQ=255) ccGGCATTTCGGGGGGGGAGCCGCGGACCTTCTAGGTCCCGGCCTGTGTTGGGTTTTGATCCGAGACTGGCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCTAAGGGGCGCAAAGCGCCCCCGGCGa < 6:37095/148‑1 (MQ=255) cGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGAt > 4:375494/1‑148 (MQ=255) cTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGa < 3:375494/149‑1 (MQ=255) cTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGa < 2:66016/149‑1 (MQ=255) tccGTGGGGTAGCCGCGGACCTGCTACGTCCAGGCCATGGTGGGGTTTTGATCCGAGACTGCCGGGGCGGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGTTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGaa < 2:83654/145‑1 (MQ=255) aCGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAac > 5:175330/1‑148 (MQ=255) gAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTc < 6:58139/149‑1 (MQ=255) gAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTc < 5:283715/149‑1 (MQ=255) aGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTcg < 5:229209/149‑1 (MQ=255) gcgGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTcgg‑‑ccg > 2:359944/1‑149 (MQ=255) cTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGaaa > 1:187646/1‑149 (MQ=255) cTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGACGGGGCCGCTTTGCGGCCCGTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGaaa < 1:324597/149‑1 (MQ=255) cTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGa > 3:352775/1‑149 (MQ=255) gCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGAt < 3:119932/144‑1 (MQ=255) gCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCCCTTTGCGGCCCTTAGCTAGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCCCCCCCCGCGATTACGAAACCACCGCCTCCG‑‑CCGGCGAAACGAt > 4:119932/1‑144 (MQ=255) gCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCtt < 1:105207/149‑1 (MQ=255) cAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCg > 5:227106/1‑149 (MQ=255) cAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCG‑CCCCGGCGATTACGAAACCACCGCCTcgg‑‑ccgg > 1:81360/1‑128 (MQ=255) cAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCG‑CCCCGGCGATTACGAAACCACCGCCTcgg‑‑ccgg < 2:81360/128‑1 (MQ=255) tgtTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGccc < 6:144775/149‑1 (MQ=255) ttGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTTCTCTTCGccccc > 2:359624/1‑149 (MQ=255) gggTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTcgg‑‑ccgg < 1:370034/122‑1 (MQ=255) gggTTTTGATCCGAGACTGTCGGGGCCCCTTTGCGGCCCTTCCCTCGCTCATGTAGGAGCCGGTTTACCCGCGAAGGGGCGCAAAACGCCCCCGGCGATTACGAAACCACCCCCTcgg‑‑ccgc > 2:370034/1‑121 (MQ=255) gTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCcgcg > 8:39943/1‑149 (MQ=255) tttGATCCGAGACTGTCGGGGCCGCTTTTCGGCCCATAGCTAGCTCTTTTATGAGCGGGTTTTACCGCGAAGGGGCCCAAAGCGCCCCCCGCGATTAAGAAACCCCCCCCACGG‑‑CCGGCGAAACGAAA‑CAGCTATTAGccccccccca > 2:430397/1‑144 (MQ=255) ttGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGAt < 7:21502/148‑1 (MQ=255) tCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTccc < 4:352775/149‑1 (MQ=255) cGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTcccc > 8:210320/1‑148 (MQ=255) cGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCg < 2:187646/149‑1 (MQ=255) agaCTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAg > 3:98653/1‑149 (MQ=255) gaCTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGc < 5:408847/149‑1 (MQ=255) cTGTCGGGGCCGCTTTGCGGCCCTTCCCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTc < 8:394586/149‑1 (MQ=255) gaagggCCGCAAAGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAgg > 7:89708/4‑149 (MQ=255) gaagggCCGCAAAGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAgg > 8:208610/4‑149 (MQ=255) tctggCCGCTTTGCGGCCCTTCGCTCGCTCTTGTTGCTGCGGGTTTACCCGCGAAGGGGCGAAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAgg < 6:286731/145‑1 (MQ=255) ggggCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTa > 2:153860/1‑149 (MQ=255) ggggCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTa > 7:344165/1‑149 (MQ=255) gCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTaga > 5:286731/1‑146 (MQ=255) gCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTAcgc > 7:86070/1‑149 (MQ=255) cTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAACCCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTCCGCGGCAATCGACTCCt > 8:379375/1‑149 (MQ=255) cTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCt < 8:344165/149‑1 (MQ=255) cTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGAGAAACGATA‑CTCATCTTCGCCCCCCGCGATATCCCAGAGCTCAGGTACGCGGCAATCGACtacg > 8:373722/1‑146 (MQ=255) ttCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTg > 1:131785/1‑149 (MQ=255) ctcgctcTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGt > 3:143522/1‑148 (MQ=255) ctcgctcTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTc < 1:430397/149‑1 (MQ=255) gtcggAGCGGGTTTACCCGCGAAGGTGCGCAAAGCGCACCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGcc < 8:114558/145‑1 (MQ=255) gTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGcc > 7:200091/1‑148 (MQ=255) gTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGc < 3:428621/147‑1 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGcc > 8:46873/1‑147 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCa > 4:249939/1‑149 (MQ=255) ggAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAgg < 6:227106/149‑1 (MQ=255) ggAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAgg < 4:143522/149‑1 (MQ=255) gAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGCGCTCAGGTACGCGGCAATCAACTCCTGCGTCACCTCTCACAgg > 6:304987/1‑148 (MQ=255) gAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAgg > 3:388851/1‑148 (MQ=255) aGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGaa < 1:173595/149‑1 (MQ=255) cGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAaca < 3:249939/149‑1 (MQ=255) gTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCt > 3:93077/1‑149 (MQ=255) tttACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATc > 8:109877/1‑117 (MQ=255) tttACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATc < 7:109877/117‑1 (MQ=255) aCCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTc > 2:239052/1‑149 (MQ=255) ccGCGAATGGGCGCAAATCGCCCCCGGCGATTACGAAACCACCGCCTCGGCTCCAGCGAAACGTTA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTc < 1:359624/149‑1 (MQ=255) ccGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCgg > 1:235517/1‑149 (MQ=255) ccGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCgg > 2:344968/1‑149 (MQ=255) cgcgAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCgg > 7:8437/1‑148 (MQ=255) gcgAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTc < 5:362084/122‑1 (MQ=255) gcgAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTc > 6:362084/1‑122 (MQ=255) gcgAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCa > 4:95833/1‑149 (MQ=255) ccgggggCGCTTTGCGCCCCTGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATc > 6:363839/4‑149 (MQ=255) ggggCGCTTTGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTAGCCCAGGAACACCTGCTCGGCATCCaa > 8:227383/1‑149 (MQ=255) ggggCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCaa < 6:175330/149‑1 (MQ=255) ggCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAAC‑ATATCTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCAaca < 1:359944/149‑1 (MQ=255) gcAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCAACACTg < 4:98653/149‑1 (MQ=255) cAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCAACACTgg > 6:305841/1‑149 (MQ=255) aaaGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCAACACTGGc < 2:131785/149‑1 (MQ=255) aaaGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCAACACTGGc < 8:86070/149‑1 (MQ=255) | ACAACAATGCCGGCCTTTACGTGGGGGAGCCGCGGACCTTCTACGTGCAGGCCAGTGTTGGGTTTTGATCCGAGACTGTCGGGGCCGCTTTGCGGCCCTTCGCTCGCTCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCGCAAAGCGCCCCCGGCGATTACGAAACCACCGCCTCGG‑‑CCGGCGAAACGATA‑CTGCTCTTCGCCCCCCGCGATCTCCCCGAGCTCAGGTACGCGGCAATCGACTCCTGCGTCACCTCGCCCAGGAACACCTGCTCGGCATCCAACACTGGC > NC_002947/1007433‑1007722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |