| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,038,225 | G→C | 5.1% | G390G (GGC→GGG) | PP_0897 ← | class 1 fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,038,225 | 0 | G | C | 5.1% | 255.1 / 2.5 | 78 | G390G (GGC→GGG) | PP_0897 | class 1 fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base G (36/38); new base C (2/2); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
CGCCAACGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCA > NC_002947/1038077‑1038370 | cgccAACGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCggg > 2:298989/1‑149 (MQ=255) ccAACGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGcc > 5:40634/1‑149 (MQ=255) aaCGGCCATCAGGTACACGGCGGTGTTGTCCTTGATCGCGTCGATGGCGGTCGGGCCACGGTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTGCAGGATCTGGCGTGTGACGTGGTCGATGGG‑GGGAGCGGTGGTcgggcggg > 4:294703/1‑149 (MQ=255) aaCGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCAGACG‑GGTAGCAGTGGTCGGGCCgg > 7:332758/1‑149 (MQ=255) cGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCt < 3:392891/149‑1 (MQ=255) ggCCATCTGGTACACGGCATTGTTGTCCTTGATCGCCTGTATGTCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTg < 7:335324/149‑1 (MQ=255) ccATCAGGTACACGGCCTTGTTGACCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTggg < 1:29268/149‑1 (MQ=255) cATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGc > 7:371569/1‑149 (MQ=255) aGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAGTCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTAc < 3:422311/149‑1 (MQ=255) gTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTAcc > 3:176863/1‑148 (MQ=255) cacGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACtt > 1:418523/1‑149 (MQ=255) cacGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTAGGCCCAGCCGGCCCGACCACt < 3:253153/148‑1 (MQ=255) acGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTc < 7:238087/149‑1 (MQ=255) ggCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGt > 3:379843/1‑149 (MQ=255) ccTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACTCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTca < 8:106939/149‑1 (MQ=255) ccTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTca < 5:432717/149‑1 (MQ=255) gtCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCt > 5:94055/1‑130 (MQ=255) gtCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCt < 6:94055/130‑1 (MQ=255) ccTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCggg > 5:442219/1‑149 (MQ=255) cTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTca < 6:50454/139‑1 (MQ=255) cTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTca > 5:50454/1‑139 (MQ=255) tGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTc > 1:346091/1‑148 (MQ=255) aTCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGAc > 8:237350/1‑149 (MQ=255) aTCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGAc < 1:298989/149‑1 (MQ=255) cTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGc > 1:72914/1‑149 (MQ=255) taTGGCGGTCGGGCCACGCTCTGACTTGCCTATCATGCCCAGAAGTCCAGTCTGCTCAAGGATATGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACAACTTCGTCACCCACCGGGTCGACCGGTCCGa < 8:326556/148‑1 (MQ=255) gATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGcc < 7:167540/147‑1 (MQ=255) gCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGTGGTAGCAGTGGTCGGGCCGGCTGGGCCTAc < 1:41000/114‑1 (MQ=255) gCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTAc > 2:41000/1‑113 (MQ=255) gCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACg < 1:165063/147‑1 (MQ=255) gCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTAGGCCCAGCCGGCCCGAc > 7:356601/1‑113 (MQ=255) gCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTAGGCCCAGCCGGCCCGAc < 8:356601/113‑1 (MQ=255) ggTCGGGCCACGCTCGGACGTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgtagt < 7:90249/149‑1 (MQ=255) gTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgtagta < 6:40634/149‑1 (MQ=255) gTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgtag > 8:334440/1‑147 (MQ=255) gCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCAGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTTGAt < 5:429593/147‑1 (MQ=255) gCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCAGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGATGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGAt > 6:429593/1‑147 (MQ=255) cGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCATCGGGTCGACCGGGCCGACGTAGTAGATGAAGCg < 1:214617/149‑1 (MQ=255) cTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑CGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGCCCGGGCCGACGTAGTACATGAAGCGGc > 1:380837/1‑149 (MQ=255) tCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGcc > 3:87430/1‑149 (MQ=255) ggACTTGCCAATCATGCCCAGCAGGCCAGGCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGcc < 5:37329/147‑1 (MQ=255) gCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGAc < 5:24830/123‑1 (MQ=255) gCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGAc > 6:24830/1‑123 (MQ=255) gCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg < 5:358591/147‑1 (MQ=255) gCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg < 6:423246/147‑1 (MQ=255) gCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGt > 5:158848/1‑149 (MQ=255) gCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGt > 5:218746/1‑149 (MQ=255) ccAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTc > 7:370076/1‑95 (MQ=255) ccAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTc < 8:370076/95‑1 (MQ=255) aaTCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTa > 5:42628/1‑149 (MQ=255) aTGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCg < 2:346091/148‑1 (MQ=255) gCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACAACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGc > 4:243924/1‑148 (MQ=255) ccAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTCCAGGTCTAcc < 5:244426/143‑1 (MQ=255) ccAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTACAGGTCTAcc > 6:244426/1‑143 (MQ=255) cagcagGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTc < 7:25938/138‑1 (MQ=255) cagcagGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTc > 8:25938/1‑138 (MQ=255) tGCTCAAGGATCTGGGGAGTGAACTTGTCCATACG‑GGTAGCAGGGGTCGTGCCGGGTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTGGCCACGGtt < 8:318126/149‑1 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGtt < 4:379843/147‑1 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGtt > 5:138395/1‑147 (MQ=255) cTCAAGGATCTGGCGAGTGAACTAGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGCTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCTGCAACTCTTCGCCACGGtt > 7:318126/1‑147 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAActc > 7:32644/1‑134 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAActc < 8:32644/134‑1 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGtt > 3:105906/1‑146 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAg > 1:202843/1‑149 (MQ=255) aaGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGGAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGa < 4:105906/146‑1 (MQ=255) gATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCAttt < 7:237350/149‑1 (MQ=255) tCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCGTCGCCACGGTTGAGCATTTc > 6:237645/1‑148 (MQ=255) cTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCaa > 6:399157/1‑149 (MQ=255) ggCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAAc > 5:402799/1‑148 (MQ=255) gCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCaa < 6:42628/146‑1 (MQ=255) cGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCAt < 6:218746/149‑1 (MQ=255) aCTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTtg > 2:251340/1‑149 (MQ=255) cATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCgg < 6:442219/149‑1 (MQ=255) aTACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCgg > 5:252954/1‑148 (MQ=255) g‑ggTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCa > 5:31741/1‑149 (MQ=255) gCAGTGGTCGGGCCGGCAGGGCCTACCACTTCGGCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACTGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGc < 8:371569/148‑1 (MQ=255) cAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCg < 7:334440/149‑1 (MQ=255) aaGTGGTAGGCCCAGCCGGCCCGACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCg > 7:107976/2‑149 (MQ=255) tCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGc < 6:158848/149‑1 (MQ=255) tCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGc < 2:418523/149‑1 (MQ=255) ggCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCa < 2:187074/147‑1 (MQ=255) ggCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCa > 1:187074/1‑147 (MQ=255) | CGCCAACGGCCATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCCAGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACG‑GGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCA > NC_002947/1038077‑1038370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |