| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,104,557 | G→A | 6.3% | intergenic (+50/‑42) | murA → / → hisG | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase/ATP phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,104,557 | 0 | G | A | 6.3% | 235.2 / 3.5 | 79 | intergenic (+50/‑42) | murA/hisG | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase/ATP phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (35/39); new base A (3/2); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.55e-01 | |||||||||||
CCTGATCGATCGCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGACAAGAGCCGCAAACT > NC_002947/1104411‑1104705 | ccTGATCGATCGCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGAt < 3:121194/149‑1 (MQ=255)ccTGATCGATCGCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCAAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGAt < 8:96186/149‑1 (MQ=255) cTGATCGATCGCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGAt > 1:148371/1‑148 (MQ=255) cTGATCGATCGCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATg < 4:341013/149‑1 (MQ=255) atcgatcgCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGAcc > 4:133850/1‑149 (MQ=255) tcgatcgCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCt < 5:167540/149‑1 (MQ=255) tcgatcgCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCt < 7:220582/149‑1 (MQ=255) atcgCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGc > 5:35149/1‑149 (MQ=255) aTCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCTCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGgca < 7:282202/149‑1 (MQ=255) aTCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGACGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGgca < 7:277281/149‑1 (MQ=255) tACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGgcag > 6:7615/1‑147 (MQ=255) ccACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGgcagca < 6:92363/147‑1 (MQ=255) ccACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGgcagc < 2:148371/146‑1 (MQ=255) ccACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTCCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGgcagca < 5:371887/147‑1 (MQ=255) acaTCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGTGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCg > 5:91860/1‑149 (MQ=255) tCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCtt < 1:195569/149‑1 (MQ=255) gACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTa < 5:7615/148‑1 (MQ=255) aCCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAg < 3:216195/149‑1 (MQ=255) cGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGa < 3:232153/149‑1 (MQ=255) ttACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGAc > 5:221155/1‑149 (MQ=255) cGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGtt > 4:84669/1‑149 (MQ=255) gAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTAGCCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGtt > 1:325705/1‑149 (MQ=255) gAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTc > 1:415219/1‑149 (MQ=255) aTCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGAt > 4:10080/1‑106 (MQ=255) aTCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑t > 8:184297/1‑149 (MQ=255) aTCGAGGAAAAACTGCAGAGGCTCGGGGCGAAAATCCGCCGCGTA‑CCGGGGTTGTACCCCGGGGGTGCATGTACGCACCTTTTGAATTGAATGCGGCCTGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑t < 6:45216/149‑1 (MQ=255) tCGAGGATAAAGTGCTGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTAGCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑tt < 5:102529/149‑1 (MQ=255) tCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑tt < 7:184297/149‑1 (MQ=255) cGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTg > 2:360606/1‑149 (MQ=255) gAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTg < 3:272412/148‑1 (MQ=255) gAGGAAAAACTGCAGAAGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTg < 6:410447/148‑1 (MQ=255) aaaaCTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATc < 7:225391/149‑1 (MQ=255) gCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCa > 2:354909/1‑147 (MQ=255) tCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAgg > 4:238614/1‑149 (MQ=255) cgcgAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGt < 1:360606/149‑1 (MQ=255) aaaTCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATtc > 2:81686/1‑148 (MQ=255) aaaTCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCATCGACCTGGc < 6:268759/83‑1 (MQ=255) aaaTCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCATCGACCTGGc > 5:268759/1‑83 (MQ=255) aaTCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATtctc < 6:35149/149‑1 (MQ=255) aTCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCAGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTcg < 2:214175/149‑1 (MQ=255) cgccgcGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGCCCATCGCGCTTTCCAAAGGCCGTATTCTcgac > 2:142197/1‑148 (MQ=255) acccgcGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTcgac > 2:296038/3‑148 (MQ=255) gccgcGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTcgacga > 5:381086/1‑149 (MQ=255) ccgcGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGCACGCACCTTTTGAATTGAATGCGGCCAGGTCGATCACCTGGCCGGCAGCAGACGAATAAGGACCGACGTTCCAATG‑‑‑TAGACCATCGCGCTATCCAAAGGAAGTATACTcgaagc > 2:385754/1‑145 (MQ=255) cgTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATAcc > 1:190745/1‑149 (MQ=255) tA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCtt < 1:354909/149‑1 (MQ=255) ccGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTg < 3:84669/148‑1 (MQ=255) cGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGcc < 3:238614/149‑1 (MQ=255) gggCTTGTACCCGGCGGGTGAATGGAGCAACCTTTTTAATTTATTGGGCCCTGGTCGATCACGTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCg < 2:415219/149‑1 (MQ=255) aCCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGc > 7:80988/1‑149 (MQ=255) ccccGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGcc < 6:381086/149‑1 (MQ=255) ccccGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGcc > 1:425804/1‑149 (MQ=255) ccccGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGcc > 1:85288/1‑149 (MQ=255) cccGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGcc > 1:208922/1‑148 (MQ=255) ccGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGcc > 1:223085/1‑147 (MQ=255) gggTGCAAGGACGCACCTTTTGAATTGACTGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑GTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGcc < 7:153261/149‑1 (MQ=255) tGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGc < 4:425845/149‑1 (MQ=255) tGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGc < 2:85288/149‑1 (MQ=255) cAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCa < 2:190745/148‑1 (MQ=255) ggACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGt > 3:287174/1‑149 (MQ=255) gACGAACCTTTTGATTTGATTGCGGCCTGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACTTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACTATACCTTGCCGTTGCTCGCCGAGTCCGGCATCGTg < 4:23236/149‑1 (MQ=255) gCACCTTTTGAATTGAATGCGGCCAGGGCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGccg < 1:392665/149‑1 (MQ=255) aCCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGccgac > 6:435919/1‑149 (MQ=255) aCCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGccgac > 7:105334/1‑149 (MQ=255) aCCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGccgac < 2:325705/149‑1 (MQ=255) ttgaattgaaTGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAGAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGaa < 3:133850/148‑1 (MQ=255) gaattgaatGCGGCCAGGTCGATGTCCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCAAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCAGACCGAAAAc > 7:60021/1‑149 (MQ=255) gaattgaatGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAAc > 6:114606/1‑149 (MQ=255) aattgaatGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAAcc > 3:31398/1‑149 (MQ=255) ttgaatGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCg < 1:81686/149‑1 (MQ=255) tgaatGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCg > 8:131288/1‑148 (MQ=255) tgaatGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCg < 2:425804/148‑1 (MQ=255) tGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGAc > 2:69866/1‑147 (MQ=255) gCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGAc > 7:190446/1‑146 (MQ=255) ggCCAGGTCATCGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGccgaccg < 5:94968/133‑1 (MQ=255) ggCCAGGTCATCGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGccgaccg > 6:94968/1‑133 (MQ=255) gCCAGGTCATCGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGTCCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGACAAGAGc > 6:375511/1‑149 (MQ=255) ggTCGAGGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGGTCCAATGCCTTTTACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGACAAGAGcc < 1:142197/149‑1 (MQ=255) gTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCTCCGAGGCCGGCATAGTGCCGACCGAAAACCCGGACAAGAGCCGCa > 3:344257/1‑148 (MQ=255) gATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGa > 6:80012/1‑134 (MQ=255) gATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGa < 5:80012/134‑1 (MQ=255) gATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGACAAGAGCCGCAAACt > 7:92238/1‑149 (MQ=255) | CCTGATCGATCGCATCTACCACATCGACCGTGGTTACGAGTGCATCGAGGAAAAACTGCAGATGCTCGGCGCGAAAATCCGCCGCGTA‑CCGGGCTAGTACCCCGCGGGTGCAAGGACGCACCTTTTGAATTGAATGCGGCCAGGTCGATGACCTGGCCGGCAGCAGCCGCTTAAGGACCGACGTTCCAATG‑‑‑TTGACCATCGCGCTTTCCAAAGGCCGTATTCTCGACGATACCTTGCCGTTGCTCGCCGAGGCCGGCATCGTGCCGACCGAAAACCCGGACAAGAGCCGCAAACT > NC_002947/1104411‑1104705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |