| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,178,751 | T→A | 8.2% | intergenic (+56/+38) | guaA → / ← PP_1033 | glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,178,751 | 0 | T | A | 8.2% | 208.0 / 7.6 | 73 | intergenic (+56/+38) | guaA/PP_1033 | glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (38/29); new base A (2/4); total (40/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.09e-01 | |||||||||||
TCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTTTTC > NC_002947/1178604‑1178899 | tCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAt < 5:121595/148‑1 (MQ=255)tCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAt < 8:85761/148‑1 (MQ=255)tCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAt < 4:121034/148‑1 (MQ=255) cGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTg < 7:26384/149‑1 (MQ=255) ggTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGc < 8:295519/149‑1 (MQ=255) cGTATCATAAACTAAATCGACTGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGTTCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGAGGGATACACCAGAAAGCCCGCATGTTTGCgg < 2:369129/148‑1 (MQ=255) tATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCATGCGGGCt < 6:353974/149‑1 (MQ=255) atcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCt > 5:209754/1‑149 (MQ=255) atcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCATGCGGGCTTTc < 6:224439/148‑1 (MQ=255) tcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTg > 7:215220/1‑149 (MQ=255) tcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCATGCGGGCTTTCTg < 6:386822/149‑1 (MQ=255) aaCGAAATCGACGGTATCTCGCTCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGt > 7:67125/1‑149 (MQ=255) aaCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGt > 7:270871/1‑149 (MQ=255) cGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTc < 4:58313/149‑1 (MQ=255) aTCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTgt < 8:215220/149‑1 (MQ=255) tCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGAATGCGGCCTTACTGGATCTTgtt > 7:23932/1‑149 (MQ=255) gACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTgttcg > 2:100624/1‑149 (MQ=255) aCGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTgttcgt > 7:294846/1‑149 (MQ=255) ggTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTgttcgttc < 1:100624/149‑1 (MQ=255) cgcgcgTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGc > 7:148558/1‑149 (MQ=255) cgcgTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCt > 1:298510/1‑148 (MQ=255) tACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCATGCGGGCTTTCTGGt > 5:33707/1‑123 (MQ=255) tACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCATGCGGGCTTTCTGGt < 6:33707/123‑1 (MQ=255) cTACGACTTGTCGAGCAAGCCGCCTGCCACTATCGATTGGGAGTGATCTGGTAGCCAGCCGATGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct < 8:197635/149‑1 (MQ=255) cTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct < 8:67125/149‑1 (MQ=255) cTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct < 7:350039/149‑1 (MQ=255) cTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct > 2:15860/1‑149 (MQ=255) cgtcgTCTCGAGCAAGCCGCCTGCCACTCTCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TTGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTgg < 8:109340/145‑1 (MQ=255) tgtCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCt < 6:209754/149‑1 (MQ=255) tCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTgg > 3:98540/1‑149 (MQ=255) gAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAATCTTCTGGCTTTCTGGc > 1:96855/1‑148 (MQ=255) gAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCAGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGc > 3:68462/1‑148 (MQ=255) tgCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTgt < 7:325951/112‑1 (MQ=255) gCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCaaa < 2:298510/149‑1 (MQ=255) gCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCaaa > 6:182896/1‑149 (MQ=255) cAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAAt < 8:228917/149‑1 (MQ=255) aaGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATAATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATa < 4:81987/149‑1 (MQ=255) aGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAg > 8:165517/1‑149 (MQ=255) ccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCtt > 7:160979/1‑149 (MQ=255) cTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCttt > 1:216235/1‑149 (MQ=255) tGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTc > 4:236707/1‑149 (MQ=255) ccACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTg < 5:22337/149‑1 (MQ=255) aCTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTgg > 5:176962/1‑148 (MQ=255) cTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTgg > 2:342587/1‑147 (MQ=255) tATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAg > 3:365457/1‑149 (MQ=255) tCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGc < 8:348729/149‑1 (MQ=255) gAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCg < 4:365457/148‑1 (MQ=255) gAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGt < 4:98540/149‑1 (MQ=255) gTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGtt < 8:148558/148‑1 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGCGTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTta > 1:225670/1‑147 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAg < 6:168294/149‑1 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAg > 3:272059/1‑149 (MQ=255) aGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAgg > 7:319437/1‑148 (MQ=255) tGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGa‑aa < 8:294846/149‑1 (MQ=255) tGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGa‑aa < 2:283662/149‑1 (MQ=255) tGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGa‑aa < 7:165517/149‑1 (MQ=255) gATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑Aag > 4:397497/1‑149 (MQ=255) aTCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑Aag > 8:160045/1‑148 (MQ=255) ggTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGcc > 6:73494/1‑149 (MQ=255) ggtgccagccTGGGC‑TGGCTACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTAAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGGTGGCGTTTTAGGA‑TAGAAGcc > 6:300403/4‑149 (MQ=255) cccAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCa > 8:5526/1‑149 (MQ=255) gC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCttt > 3:346054/1‑92 (MQ=255) gC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCttt < 4:346054/92‑1 (MQ=255) gC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGc > 3:271865/1‑148 (MQ=255) c‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGa < 1:15860/149‑1 (MQ=255) gC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGAt < 8:270871/147‑1 (MQ=255) ccGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTc < 4:272059/149‑1 (MQ=255) gCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGt > 3:238114/1‑149 (MQ=255) gCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCCTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGt > 6:160560/1‑149 (MQ=255) gACGGATACACCAGAAAGCCCGCATGATTGCGTGCTTTCTGGTTCTTGTTCGTTCATATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCAc < 4:234551/148‑1 (MQ=255) acCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCAcgcg > 8:113358/1‑149 (MQ=255) ccAGAAAGCCCGCAATCATGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGt > 5:306581/1‑149 (MQ=255) cAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGtt > 5:403894/1‑149 (MQ=255) cccGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTg > 5:333131/1‑149 (MQ=255) ccGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGc > 8:106654/1‑149 (MQ=255) cATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCttt > 5:79133/1‑149 (MQ=255) tGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGACAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCtttt < 1:342587/149‑1 (MQ=255) tGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTTTTc < 3:397497/149‑1 (MQ=255) | TCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGC‑TGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGA‑AAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTTTTC > NC_002947/1178604‑1178899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |