| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,229,547 | G→C | 8.7% | Q909H (CAG→CAC) | PP_1072 → | leucine‑rich repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,229,547 | 0 | G | C | 8.7% | 213.0 / 8.9 | 69 | Q909H (CAG→CAC) | PP_1072 | leucine‑rich repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (30/33); new base C (3/3); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
TGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCT > NC_002947/1229403‑1229690 | tGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGgc < 1:375145/149‑1 (MQ=255) ttCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAg < 7:161524/148‑1 (MQ=255) cACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg < 2:137955/147‑1 (MQ=255) cACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTCTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg > 1:137955/1‑147 (MQ=255) cACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCAGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCAAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAggg > 6:172222/1‑148 (MQ=255) aCCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGAt > 8:372397/1‑149 (MQ=255) aCCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGAt > 4:324671/1‑149 (MQ=255) ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGAt > 1:274937/1‑148 (MQ=255) ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGAt < 2:274937/148‑1 (MQ=255) ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg > 1:27489/1‑145 (MQ=255) ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg < 2:27489/145‑1 (MQ=255) aaGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAggctctga < 8:385317/149‑7 (MQ=255) aGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGGAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGc > 4:340683/1‑147 (MQ=255) tttCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTaa < 7:44940/149‑1 (MQ=255) tCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAAc < 8:42990/148‑1 (MQ=255) tCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGGTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAAc < 7:356178/148‑1 (MQ=255) ccGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGCGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAAcc < 5:78813/148‑1 (MQ=255) cgaTGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGGGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTg < 4:232723/149‑1 (MQ=255) cAGACGGGGTGCTTCAAGCCTATCTGCTTGACCTCATGGAGCGGGGAGTAGGGTGGTGGGAGCACTACAGCCATCTGACGGTGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGACAGGGGCGCAGGGATGCCAGTAACCCACTGGACGCt < 5:172222/149‑1 (MQ=255) cAGACGGGGAGCTACAAGCCTATCTTCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCt < 6:54318/149‑1 (MQ=255) agccGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg < 6:414242/121‑1 (MQ=255) aCGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTa > 3:289339/1‑149 (MQ=255) cGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAc < 6:429718/149‑1 (MQ=255) ggggAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGGGGGAGCACTACAGCCAGTTGACGGGGCAGTTGGCGCGCCTGCGGCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAcg < 2:267476/149‑1 (MQ=255) gCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGCAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACgccgcc < 3:340683/149‑1 (MQ=255) tACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGt > 5:227853/1‑149 (MQ=255) cAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGt < 2:33201/147‑1 (MQ=255) cAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCg > 3:344732/1‑149 (MQ=255) cAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCg > 2:259171/1‑149 (MQ=255) cAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCg > 2:252560/1‑149 (MQ=255) cTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCg < 6:251818/149‑1 (MQ=255) tCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTa > 6:441735/1‑149 (MQ=255) gCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTg > 7:276420/1‑149 (MQ=255) cTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACg > 5:90538/1‑149 (MQ=255) aTGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACgg < 7:372397/147‑1 (MQ=255) aTGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACgg < 8:276420/147‑1 (MQ=255) aTGCAGCGGCGAGTAGGGTTGTCGGAGCACTACACCCACCTGACGGGGCAGTTGGCGCGCCTGCGTCAGACCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACgg < 2:424789/147‑1 (MQ=255) gcgAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggc > 4:10263/1‑149 (MQ=255) gggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGgcgc > 3:71907/1‑147 (MQ=255) gggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCaa < 1:252560/149‑1 (MQ=255) gggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCaa < 1:259171/149‑1 (MQ=255) tgGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATaa < 7:324575/148‑1 (MQ=255) ccagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCggg > 2:137225/1‑148 (MQ=255) cagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGa < 4:289339/149‑1 (MQ=255) aCGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTAcg < 3:324671/148‑1 (MQ=255) cGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTAcgcg < 5:189681/149‑1 (MQ=255) cGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTAcgcg > 2:103146/1‑149 (MQ=255) ggggCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGgcgc > 7:264085/1‑118 (MQ=255) ggggCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGgcgc < 8:264085/118‑1 (MQ=255) aGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGat > 7:173257/1‑148 (MQ=255) gTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGatca > 4:65952/1‑149 (MQ=255) ttGGCGCTCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGatca > 6:440543/1‑148 (MQ=255) ttGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggcg < 4:396909/107‑1 (MQ=255) ttGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggcg > 3:396909/1‑107 (MQ=255) ttGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGatcat > 4:276041/1‑149 (MQ=255) ggCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGAtcatca < 4:71907/149‑1 (MQ=255) gcgcgcCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAg > 5:224579/1‑149 (MQ=255) gcgcCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCg > 3:402195/1‑149 (MQ=255) gcgcCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCg > 3:201312/1‑149 (MQ=255) cTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCCTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATGATCAGCgcgta < 5:441735/149‑5 (MQ=255) gCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGc > 2:90845/1‑149 (MQ=255) gTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCg > 5:341620/1‑148 (MQ=255) gTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGt < 3:276041/149‑1 (MQ=255) gagCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATACCCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCg > 1:118423/1‑149 (MQ=255) atcccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCg > 7:45215/4‑149 (MQ=255) gCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCgg < 6:90538/148‑1 (MQ=255) ccTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCgg > 6:317868/1‑147 (MQ=255) cgcCAGTGGCGCAGGGATGCCAGTAACCGACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGt < 5:440543/147‑1 (MQ=255) cgcCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCt < 4:344732/149‑1 (MQ=255) | TGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCT > NC_002947/1229403‑1229690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |