| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,368,197 | G→T | 5.5% | intergenic (+26/‑157) | PP_1193 → / → PP_1194 | membrane protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,368,197 | 0 | G | T | 5.5% | 244.3 / 3.4 | 82 | intergenic (+26/‑157) | PP_1193/PP_1194 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (38/39); new base T (2/3); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.11e-01 | |||||||||||
ATGTTGGTGGTGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGG > NC_002947/1368049‑1368337 | aTGTTGGTGCTGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAg < 3:331046/149‑1 (MQ=255) ggtggtGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCC‑GGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACg > 2:282458/1‑149 (MQ=255) catgctgAAGCGGGTGACGATCATGGCAATCACGTGGGTGGCGAACCCGGTAATGAACACGGTGTTCATGACGGCGGCGAGGCAGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGATGAGGCCCATACAACAACCAg > 4:102997/6‑144 (MQ=21) gtggtgAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGc > 5:374508/1‑144 (MQ=255) gtggtgAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGc < 6:374508/144‑1 (MQ=255) gtgAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGt > 7:281997/1‑149 (MQ=255) aCCTGGTGACGATCACGGCAACCATGGGGGTGGCGAACCCGGTAATGACCAGGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTg < 2:296668/149‑1 (MQ=255) ccTGGTGACGATCACGGCAACCATGTGGGGGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGt < 7:32125/149‑1 (MQ=255) cTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTa < 4:99658/149‑1 (MQ=255) tGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTAt > 4:227621/1‑149 (MQ=255) tGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACAACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCAGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTAt > 6:218275/1‑149 (MQ=255) ggTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCGTCCGCTGGGTTTTGTATg < 7:48593/149‑1 (MQ=255) ggTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTAt > 8:279743/1‑148 (MQ=255) gTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGTCCATACAAAACCCAGCGGACGGGTTTTGTa < 6:15056/146‑1 (MQ=255) gTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGTCCATACAAAACCCAGCGGACGGGTTTTGTa > 5:15056/1‑146 (MQ=255) gTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTAt < 5:93262/147‑1 (MQ=255) cGATCACGGAAACCATGTGTTTTGCGAACCATGTAATTACAACGGTTTTCATGCCGGCTGCGAGGCCGGGTATGA‑CAAAAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCATCGGACGGGTTTTGTATGAGCAg < 8:120578/149‑1 (MQ=255) tCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGtt < 2:266331/149‑1 (MQ=255) tCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGtt > 8:295530/1‑149 (MQ=255) cGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGc > 8:166471/1‑141 (MQ=255) cGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGc < 7:166471/141‑1 (MQ=255) cGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTg > 1:222072/1‑149 (MQ=255) cGGCAACCATGTGGGTGGCGAACCCGGTAATGAACACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGCCGGGTTTTGTATGAGCAGGTTCTg > 4:252933/1‑149 (MQ=255) aaCCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACgg < 8:284993/124‑1 (MQ=255) aaCCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACgg > 7:284993/1‑124 (MQ=255) aaCCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCt < 3:227621/149‑1 (MQ=255) gCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTa > 6:9602/1‑148 (MQ=255) ccGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTc < 2:383610/149‑1 (MQ=255) cGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCa > 1:212662/1‑149 (MQ=255) aTGACGACGGTGTTCATGCCGTCGGCGAGGCCGGGGATGA‑CAAGAGCAGTATCTGATTGGCGCTGACCCGTAGTGGCCCATCCAAAACCCAGCGGAGGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTc < 7:403054/148‑1 (MQ=255) aTGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTc < 6:257331/148‑1 (MQ=255) tGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGTCCTGTCTTGCCTTTATCACGTCATTTCCa < 5:218275/149‑1 (MQ=255) aCCACGGTGTTCATGCCGGCGGCGATGCCGGGGATGA‑AAACAGCAGAAGCTGATTTGCTCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCaa < 7:55699/148‑1 (MQ=255) cACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAAt > 1:75067/1‑147 (MQ=255) ttCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGa < 5:9602/149‑1 (MQ=255) ttCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGa < 3:200843/149‑1 (MQ=255) ttCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGATTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGa > 3:297907/1‑149 (MQ=255) cATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGAc < 7:295530/148‑1 (MQ=255) aTGCCGGCGGCTAGGCCGGGGATGA‑CAACTGCATAAGCTGATTTGCGCTGACCCGATGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACa < 6:96737/148‑1 (MQ=255) aTGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGcc > 7:238748/1‑117 (MQ=255) aTGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGcc < 8:238748/117‑1 (MQ=255) tGCCGGCGGCGAGGCCGGGGATGAGCAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAg > 7:63441/1‑149 (MQ=255) tGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGc > 6:49760/1‑149 (MQ=255) ccGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCtt < 4:314340/149‑1 (MQ=255) ggcggcGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCtttt < 3:385015/149‑1 (MQ=255) gcgAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCt < 2:222072/149‑1 (MQ=255) gcgAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGGATGAGCAGGATCTGGCCTGTCTTGCCTTTATCACGTCATTTCGAATGAGCGCTGACTGCTTTTTACt > 6:63125/1‑149 (MQ=255) tGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCggg < 2:212662/149‑1 (MQ=255) caacaGCAGAAGCTGATTGGCGCTGACCCGAAGTTGCCCATACAAAACCCAGCGGACGGGttt < 4:237831/63‑1 (MQ=255) caacaGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGata > 5:384486/1‑149 (MQ=255) aacaGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATg < 5:424172/140‑1 (MQ=255) aacaGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATg > 6:424172/1‑140 (MQ=255) aacaGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGatat > 8:46562/1‑149 (MQ=255) aacaGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCCGACGGGTTTTGTATGAGCATGTTCTGGCCTGTCATGCCTTTATCACGTCATTTACAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGatat > 6:348399/1‑149 (MQ=255) agcagAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGGCTGTCTTTCCTTTATCACGTCATTTCCTATGAGCGCTGACAGATTTTTCGTCGTCTATGCCGGGATATGAt > 4:247686/1‑149 (MQ=255) cagAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCTGGATATGAtt < 6:223649/148‑1 (MQ=255) cagAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGAtt > 5:223649/1‑148 (MQ=255) cagAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTg > 6:384479/1‑149 (MQ=255) cagAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTg > 8:337968/1‑149 (MQ=255) agAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGc > 3:279426/1‑149 (MQ=255) gAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCg < 1:282458/149‑1 (MQ=255) gAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGATTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCg < 4:297907/149‑1 (MQ=255) gAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACCGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATAACGTCATTTCCAATGATCCCTGACAGCTTTTTCATCGTCCATGCCGGGATATCATTgag > 4:68900/1‑147 (MQ=255) cTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGttt < 3:68900/149‑1 (MQ=255) agtGGCGCTGTCCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGTCTTTATCACGTGATTTCCAATGAGAGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGTTTGCTGTTTg < 4:79544/145‑1 (MQ=255) aTTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGTGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGttt < 7:279743/146‑1 (MQ=255) aTTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGc < 7:337968/148‑1 (MQ=255) ttGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGt < 8:63441/149‑1 (MQ=255) ttGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGt < 3:93368/149‑1 (MQ=255) gcgcTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTgg > 6:240226/1‑148 (MQ=255) cgcTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGa < 5:49760/149‑1 (MQ=255) gcTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGAt > 5:249705/1‑149 (MQ=255) aCCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTaa < 7:46562/148‑1 (MQ=255) ccGAAGTGGCCCATACAAAACCCAGCGGACGCGTTTTGTATGAGCAGGTTCTGGCCTGTCTAGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCAGGGATATGATTGCGGTTTGCGTGGGATTAATTc > 8:411200/1‑149 (MQ=255) gAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTccc > 3:245737/1‑149 (MQ=255) aaGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGAGATGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCcg > 2:103729/1‑149 (MQ=255) agttccgcATAGAAAACCCAGCGTACTGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTTCCTTTATGACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCcgc < 3:252933/142‑1 (MQ=255) gctcATACAAAACCCGTCCGCTGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCt > 4:56506/4‑149 (MQ=255) gCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCt > 7:56183/1‑149 (MQ=255) tACAAAACCCGTCCGCTGGGTTTTGTATGGGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGAt > 4:11743/1‑130 (MQ=39) tACAAAACCCGTCCGCTGGGTTTTGTATGGGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGAt < 3:11743/130‑1 (MQ=39) aaaaCCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTgg > 7:205749/1‑149 (MQ=255) aaaaCCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTgg < 6:384486/149‑1 (MQ=255) aaaaCCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTgg > 4:367726/1‑149 (MQ=255) | ATGTTGGTGGTGAACCTGGTGACGATCACGGCAACCATGTGGGTGGCGAACCCGGTAATGACCACGGTGTTCATGCCGGCGGCGAGGCCGGGGATGA‑CAACAGCAGAAGCTGATTGGCGCTGACCCGAAGTGGCCCATACAAAACCCAGCGGACGGGTTTTGTATGAGCAGGTTCTGGCCTGTCTTGCCTTTATCACGTCATTTCCAATGAGCGCTGACAGCTTTTTCCTCGTCCATGCCGGGATATGATTGCGGTTTGCGTGGGATTAATTCCCGCGTCTTATACTGG > NC_002947/1368049‑1368337 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |