| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 182,036 | T→C | 9.6% | intergenic (+25/+40) | PP_5SB → / ← PP_0160 | 5S ribosomal RNA/ferrioxamine receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 182,036 | 0 | T | C | 9.6% | 220.4 / 11.6 | 84 | intergenic (+25/+40) | PP_5SB/PP_0160 | 5S ribosomal RNA/ferrioxamine receptor |
| Reads supporting (aligned to +/- strand): ref base T (38/37); new base C (3/5); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.91e-01 | |||||||||||
GAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGTTGTTGGC > NC_002947/181888‑182183 | gAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAAGTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAt < 5:122758/149‑1 (MQ=255) aTTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑g < 8:85439/148‑1 (MQ=255) aTTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑Gc < 3:129891/149‑1 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAg < 1:234045/148‑1 (MQ=255) acgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAggg < 3:395682/149‑1 (MQ=255) acgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAgg < 6:442607/148‑1 (MQ=255) acgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAgg < 6:180263/148‑1 (MQ=255) ccATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCtt > 2:303979/1‑149 (MQ=255) tAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGt < 5:125041/149‑1 (MQ=255) agCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCtt > 7:40507/1‑149 (MQ=255) gAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCtgg > 8:300397/1‑149 (MQ=255) aaCCACCTGATCCCATCCCTAACTCAGCAGTGAAACGATGCATCGGCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACGCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGt < 8:171784/149‑1 (MQ=255) accaccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGtt < 2:99573/149‑1 (MQ=255) ccaccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGttt < 3:79573/149‑1 (MQ=255) ccaccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCAAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGttt > 5:273995/1‑149 (MQ=255) caccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTc < 5:182907/149‑1 (MQ=255) caccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTc < 4:169019/149‑1 (MQ=255) cTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑g > 7:106377/1‑116 (MQ=255) cTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑g < 8:106377/116‑1 (MQ=255) atcccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATc < 1:81573/149‑1 (MQ=255) tcccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCg > 2:278764/1‑149 (MQ=255) ccatcccGAACTCTGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCgg < 2:360212/148‑1 (MQ=255) ccatcccGAACTCAGCAGTTAAACGATGCATCGCCGATGTTAGTGTGGGTTTTCCCCATGTGAGAGTATGTCATCGTCAATATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGt < 5:116959/149‑1 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGt > 6:353417/1‑149 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGt > 7:90478/1‑149 (MQ=255) catcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTG‑GATCGCAGACacg > 8:361034/1‑115 (MQ=14) atcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGt > 7:241028/1‑147 (MQ=255) tcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAAGATCGGt > 1:369678/1‑146 (MQ=255) cGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAGGGGCTTTgggtttg > 2:275088/1‑119 (MQ=18) cGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAGGGGCTTTgggtttg < 1:275088/125‑7 (MQ=18) agcagTTAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAg < 3:156139/148‑1 (MQ=255) agcagTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAg < 8:241028/148‑1 (MQ=255) agcagTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCAAGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTACAACTGATAg > 7:231654/1‑148 (MQ=255) gTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAAc < 4:229963/138‑1 (MQ=255) gTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAAc > 3:229963/1‑138 (MQ=255) tGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGAcc > 8:363656/1‑149 (MQ=255) aCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTgg > 3:290947/1‑149 (MQ=255) cATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATTTCGGTTAGAACTGATAGCTGACCGTGGCGCTc < 2:356629/148‑1 (MQ=255) cATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTca > 7:41106/1‑149 (MQ=255) cATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTc > 6:70676/1‑148 (MQ=255) aTCGCCGATGGTAGTGTGGGGTTTCCCAATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTTCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTAAATATCGGTTAGAAATGATAGATGACCGTGGCGCTca > 2:136200/1‑148 (MQ=37) aTGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTgcgc < 8:90478/149‑1 (MQ=255) gTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGctct < 7:363656/149‑1 (MQ=255) gTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGctc < 6:388662/148‑1 (MQ=255) gtgtGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGATCTTCa > 8:190461/1‑149 (MQ=255) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCAccc < 4:290947/149‑1 (MQ=255) ggTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGATCTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑g < 1:303979/149‑1 (MQ=255) gTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑g > 6:151852/1‑148 (MQ=255) ttCCCCATGTGAGAGTAGGTCTTCGTCAAGATTCAAACCCAAAGACCCAGTCTGCGCA‑CCAGACAGGCGCTGTCTCTTTTCCGGGTTTAAATATCGGATAGAACTGATAGCTGACCGTGGATCGCACATTGCGCTATTCACCGAT‑Gttc > 2:153065/1‑147 (MQ=255) tCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAg > 4:40269/1‑148 (MQ=255) cccATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCag > 5:91034/1‑149 (MQ=255) cccATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCag < 6:273995/149‑1 (MQ=255) ccATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGGTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACAGTGCGCTCTTGACCCAT‑GTAGCagg > 4:310221/1‑148 (MQ=255) ccATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCag > 6:109317/1‑148 (MQ=255) cATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCag > 8:341047/1‑147 (MQ=255) agagTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAg > 5:144403/1‑149 (MQ=255) tAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTg > 5:338165/1‑149 (MQ=255) gTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGca > 1:78854/1‑149 (MQ=255) aTCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGcaca < 5:151852/148‑1 (MQ=255) gTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAg > 7:174612/1‑149 (MQ=255) tCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAgg > 1:251985/1‑149 (MQ=255) aaGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTg > 7:366496/1‑149 (MQ=255) aGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGa < 5:70676/149‑1 (MQ=255) aGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGa < 3:40269/149‑1 (MQ=255) gATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGAt > 1:389412/1‑149 (MQ=255) aTTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCGTGGTCTTGTACGGGTTTCAATATCGGTTAGAACGGCTAGCTGACCGTGGCGCTCACATTGGGCGCTTCACCAAG‑GTTGAAGTAGTTAAGGCGGGCACTTTAGGTTATg > 6:428660/1‑149 (MQ=255) ttCAAACCCAAATCCCCTGTCTGCGTT‑GCAGTCATGGGCTTTGTCTTTTCCGGGTTTCAAAATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATCGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATg < 1:278764/149‑1 (MQ=255) aaCCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCt < 5:109317/149‑1 (MQ=255) aaaGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTCGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCAt < 6:23295/149‑1 (MQ=255) aaGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCAtt < 8:40507/149‑1 (MQ=255) aaGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCAtt < 7:300397/149‑1 (MQ=255) cccTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGt > 6:158779/1‑148 (MQ=255) cccTGTCTGCATC‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGt > 4:153971/1‑148 (MQ=255) cTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAg > 7:125161/1‑149 (MQ=255) cTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTACCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAg > 6:375193/1‑149 (MQ=255) cTGTCTGCATC‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAt > 7:326570/1‑98 (MQ=255) cTGTCTGCATC‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAt < 8:326570/98‑1 (MQ=255) tCTGCGAT‑GCAGACTGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGgtt < 1:199258/149‑1 (MQ=255) gCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCttt > 8:155430/1‑133 (MQ=255) gCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCttt < 7:155430/133‑1 (MQ=255) cGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGgttgt < 2:389412/147‑1 (MQ=255) cGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGttgttg > 1:321923/1‑149 (MQ=255) cGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGttgttg < 8:41106/149‑1 (MQ=255) cGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGttgttg < 2:369678/149‑1 (MQ=255) aT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGTTGTTGGc < 2:251985/149‑1 (MQ=255) | GAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAT‑GTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGTTGTTGGC > NC_002947/181888‑182183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |