| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,385,152 | T→C | 5.6% | intergenic (‑122/+39) | proS ← / ← oprD | proline‑‑tRNA ligase/basic amino acid specific porin OprD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,385,152 | 0 | T | C | 5.6% | 206.8 / 2.2 | 71 | intergenic (‑122/+39) | proS/oprD | proline‑‑tRNA ligase/basic amino acid specific porin OprD |
| Reads supporting (aligned to +/- strand): ref base T (29/38); new base C (2/2); total (31/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.15e-01 | |||||||||||
GGCGAGCAAATATTGACTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGACGCACGCGGAAGC > NC_002947/1385004‑1385300 | ggCGAGCAAATATTGCCTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGTGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGAtt < 3:348150/149‑1 (MQ=255) aGCAAATATTGACTTGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCg < 1:86173/149‑1 (MQ=255) gCAAATATTGACTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCgg > 3:371783/1‑149 (MQ=255) gCAAATATTGACTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCgg < 3:81696/149‑1 (MQ=255) tatTGACTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCttt > 5:59357/1‑149 (MQ=255) tatTGACTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATACCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCttt < 5:126139/149‑1 (MQ=255) ttGACTGTTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGTCGTTGAAATCGCCCCGCATTGTACGGTGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCtttt < 5:363856/148‑1 (MQ=255) ttGACTGGTGCGCATGGTTAGCCGTGTCTGATTGCCTAAGACGTTGAAATAGCCCCGCATTTTACGGGGGGGAAACGAAGGCGTACAGCATGCCCCAGGGCGTGACACTTGTCAGCCAACAAAAAGCCCGGCGTGATTGCCGGGCttt > 1:27693/1‑148 (MQ=255) aCTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCAATCACGCCGGGCTTTTTctt < 1:36987/149‑3 (MQ=255) cTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAg < 4:395284/148‑1 (MQ=255) tGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGt > 1:44093/1‑149 (MQ=255) tGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCg > 8:352408/1‑149 (MQ=255) cATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCgggg > 8:222977/1‑148 (MQ=255) aTGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCa < 6:104978/149‑1 (MQ=255) gTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACt < 5:296282/148‑1 (MQ=255) gTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACt < 7:111396/148‑1 (MQ=255) ttAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGc < 7:352408/149‑1 (MQ=255) gCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCaa < 6:197273/148‑1 (MQ=255) gCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAg < 3:410748/149‑1 (MQ=255) cGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGc > 4:276189/1‑148 (MQ=255) c‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCAAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCt > 3:225008/1‑149 (MQ=255) ttGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTAc < 1:187205/149‑1 (MQ=255) ttGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTAc < 2:89896/149‑1 (MQ=255) tGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTAc < 4:371783/148‑1 (MQ=255) gCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACa < 2:44093/148‑1 (MQ=255) cTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGa > 7:98715/1‑149 (MQ=255) aGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATg < 7:222977/148‑1 (MQ=255) gACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCt < 6:229984/149‑1 (MQ=255) gTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAg > 4:329914/1‑149 (MQ=255) gTTGAAATAGCCCCGCATTGTACGGGGGGG‑AACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGc > 1:886/1‑149 (MQ=255) ttGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGc < 7:243553/149‑1 (MQ=255) tGAAATAGCCCCGCATTGTACGGGGAGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCAATCACGCCGGGCTTTTTcttg < 2:79117/110‑4 (MQ=37) tGAAATAGCCCCGCATTGTAAGGGGAGGAAACGAAGGAGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCAATCACGCCGGGCTTTTTcttg > 1:79117/1‑107 (MQ=25) ccccGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTcc < 3:167906/149‑1 (MQ=255) ccccGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTcc < 8:187536/149‑1 (MQ=255) ccGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGAAAGCCAAGAAAAAGCCCGGCGTCATTGCCGGGCTTTTTCAGGTCCGGGGCACTCCAACCCAGGCTAAAAGGATGCTCAGCGGGAACTCCAc > 4:93609/1‑149 (MQ=255) tacaatgcGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGAt > 4:339006/8‑149 (MQ=255) gggggggAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCa < 3:282043/149‑1 (MQ=255) ggAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTtcg > 8:150390/1‑149 (MQ=255) aaaCGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTtcgtc < 4:141266/149‑1 (MQ=255) aCGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGtcga < 7:150390/149‑1 (MQ=255) gAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGtcgatc > 4:241929/1‑149 (MQ=255) gAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGtcgatc < 6:59357/149‑1 (MQ=255) aGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGtcgatcga > 2:233392/1‑149 (MQ=255) tACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAgg > 6:209763/1‑127 (MQ=255) tACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAgg < 5:209763/127‑1 (MQ=255) ggctGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATc < 2:194462/146‑1 (MQ=255) cccAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCgtag > 2:385009/1‑147 (MQ=255) cccAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCgtag > 5:411616/1‑147 (MQ=255) tGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATc > 4:152905/1‑149 (MQ=255) acacTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCgg < 3:268100/149‑1 (MQ=255) acTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCgg > 4:76474/1‑147 (MQ=255) acTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCgg > 8:71808/1‑147 (MQ=255) acTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGgaa < 3:339006/149‑1 (MQ=255) gTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAAc > 3:429791/1‑149 (MQ=255) aGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTa > 4:236683/1‑66 (MQ=255) aGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTa < 3:236683/66‑1 (MQ=255) aGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACgg > 8:131627/1‑148 (MQ=255) gCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACgg > 1:64555/1‑147 (MQ=255) gaaaGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAg < 3:93609/147‑1 (MQ=255) ccAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGa > 7:180380/1‑129 (MQ=255) ccAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGa < 8:180380/129‑1 (MQ=255) aGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTg < 6:411616/149‑1 (MQ=255) aGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTg < 3:152905/149‑1 (MQ=255) gAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTgg < 3:241929/149‑1 (MQ=255) gAAAAAGCCCGGCAATCACGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTgg > 2:350430/1‑149 (MQ=255) aaaaGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGcc > 6:204280/1‑149 (MQ=255) aGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGa > 3:428515/1‑149 (MQ=255) gCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGac < 3:76474/149‑1 (MQ=255) gCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGac < 3:329914/149‑1 (MQ=255) cGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGacgcacgc < 1:385009/149‑1 (MQ=255) aTTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGACGCACGCGGaa < 2:886/149‑1 (MQ=255) tGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGACGCACGCGGAAGc > 1:169300/1‑149 (MQ=255) | GGCGAGCAAATATTGACTGGTGCGCATGGTTAGCCGTGTC‑GATTGCCTAAGACGTTGAAATAGCCCCGCATTGTACGGGGGGGAAACGAAGGCGTACAGGATGCCCCAGGGCGTGACACTTGTCAGCCAAGAAAAAGCCCGGCGTGATTGCCGGGCTTTTTCAGGTGCGGGGCACTGCAAGCCAGGCTTACAGGATGCTCAGCGGGTACTCCACGATCAGGCGCAGTTCGTCGATCGATGGGGAATCGTAGTAGACACCATCGGAAGAACGGTAGGTGGCCTGACGCACGCGGAAGC > NC_002947/1385004‑1385300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |