| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,400,872 | C→A | 9.0% | intergenic (+35/‑134) | ybgF → / → queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,400,872 | 0 | C | A | 9.0% | 260.5 / 14.2 | 89 | intergenic (+35/‑134) | ybgF/queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Reads supporting (aligned to +/- strand): ref base C (37/44); new base A (4/4); total (41/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.42e-02 | |||||||||||
CCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACA > NC_002947/1400729‑1401015 | ccGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTc > 7:165144/1‑149 (MQ=255)ccGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTc < 1:221109/149‑1 (MQ=255) tATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGTCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTcgcg > 7:405713/1‑149 (MQ=255) tGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCgg < 1:11754/148‑1 (MQ=255) tGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCgg < 8:392645/148‑1 (MQ=255) ggCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGtt > 5:18340/1‑149 (MQ=255) gCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGttt > 7:277150/1‑149 (MQ=255) gCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGttt < 1:6553/149‑1 (MQ=255) cATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGACTGGCGCGGGtttct < 8:206579/149‑3 (MQ=255) tACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTc > 1:128822/1‑149 (MQ=255) aCAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAA‑AAACCCGCGACTGGCGCGGGTTTCTTTCgag > 1:251089/1‑145 (MQ=38) aCAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAA‑AAACCCGCGACTGGCGCGGGTTTCTTTCgag < 2:251089/147‑3 (MQ=38) agctAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAAt < 8:281329/146‑1 (MQ=255) aGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAAt < 4:245864/149‑1 (MQ=255) ggTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAAt > 7:6395/1‑148 (MQ=255) ggTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGACAGTCGCGGGTTT‑TTTCGTTAGAATc < 1:234336/149‑1 (MQ=255) aaaGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTg > 4:247473/1‑149 (MQ=255) aaGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGc < 5:42729/149‑1 (MQ=255) aaGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGc > 3:304077/1‑149 (MQ=255) cTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCtttttt > 3:74133/1‑149 (MQ=255) tCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCg > 1:115870/1‑149 (MQ=255) cagcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCTCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGTGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTc < 4:78592/147‑1 (MQ=255) agcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTa < 4:420259/149‑1 (MQ=255) agcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTa < 4:413691/149‑1 (MQ=255) ggTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAaca > 4:292838/1‑149 (MQ=255) gTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAacac > 3:280407/1‑149 (MQ=255) tCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACg < 8:19201/149‑1 (MQ=255) gACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCGAGGCGTTGTCGCGGTCCCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTGG‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACgctgc > 5:140919/1‑149 (MQ=255) aCCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACgctgct > 3:150479/1‑149 (MQ=255) cccGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAAc > 5:316863/1‑149 (MQ=255) gcGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACg < 2:128822/148‑1 (MQ=255) ccGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACg < 3:292838/149‑1 (MQ=255) gggCAACTCTGCCGCTCAACTGGCCCAGCG‑TGACGTTCTGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTc < 2:265793/100‑1 (MQ=255) cGGCACCTCTGCCGCTCAACTGGCCCAGCGTTTACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGttt‑ttta > 1:265793/1‑101 (MQ=255) cGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGc > 1:345522/1‑149 (MQ=255) aCCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATg > 1:73434/1‑149 (MQ=255) ccTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGt < 8:6395/149‑1 (MQ=255) ccGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGa < 3:247473/146‑1 (MQ=255) gCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCcg < 2:253173/149‑1 (MQ=255) cTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCcgc > 4:267247/1‑149 (MQ=255) cTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCcgc < 6:140919/149‑1 (MQ=255) aaCTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGa > 6:423034/1‑148 (MQ=255) cTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAg > 3:141505/1‑149 (MQ=255) gCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGc < 4:304077/149‑1 (MQ=255) cccAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGATGCGGATAACGCTATGTCGAGTCCGCGACAGTGcc > 8:289188/1‑149 (MQ=255) ccAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCACTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCt > 6:249797/1‑149 (MQ=255) tGACCTGCAGAAGGTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCTGTCGCGGGTTT‑TTTCGTTAGAATCACTGCGCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTGCGCGAGAGTGCCTGACGGa < 4:172698/149‑1 (MQ=255) aCCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAg < 6:18340/148‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCg < 4:150479/149‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTGTCGCTGAACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCg < 8:165144/149‑1 (MQ=255) tGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCcgc > 5:273727/1‑128 (MQ=255) tGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCcgc < 6:273727/128‑1 (MQ=255) gCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGCGGCGGa > 6:53656/1‑149 (MQ=255) gCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGa > 5:287097/1‑149 (MQ=255) aGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTTTAATAACTGCCCTTTTTTAGTAAACAAGCAGCTGCCGATAACGCTATGTAGAGTACGCGACACTGCCTGACGGAGGCGGa > 2:414235/1‑147 (MQ=255) aGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTACGCGACAGTGCCTGACGGAGGCGGa > 5:271113/1‑147 (MQ=255) aaGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAAGGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGc > 8:225939/1‑149 (MQ=255) ctctAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTg < 2:414639/149‑1 (MQ=255) tAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGtt > 1:154009/1‑148 (MQ=255) tAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGt < 3:330806/147‑1 (MQ=255) aGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTGCGCGACAGTGCCTGACGGAGGCGGACAGACTGtt > 7:334691/1‑147 (MQ=255) ggCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGtt < 2:141396/146‑1 (MQ=255) ggCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGtt < 4:74133/146‑1 (MQ=255) ggCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAg < 8:405713/149‑1 (MQ=255) ggCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAg > 7:122420/1‑149 (MQ=255) gCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGc < 4:280407/149‑1 (MQ=255) cGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCt < 4:141505/149‑1 (MQ=255) tGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGccc < 7:65403/149‑1 (MQ=255) tACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGccc < 5:423034/147‑1 (MQ=255) cGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGc < 6:316863/149‑1 (MQ=255) cGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGc > 7:39688/1‑149 (MQ=255) gCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCg < 8:277150/149‑1 (MQ=255) cTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGa < 3:267247/149‑1 (MQ=255) acgaaaaaaCCCGCGACTGGCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAg > 6:45737/7‑148 (MQ=255) gaaagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCa < 1:241594/149‑1 (MQ=255) aaagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCAt < 2:115870/149‑1 (MQ=255) aagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATg > 7:349137/1‑149 (MQ=255) aagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAAAGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACACCATGTTTAGATGTACCTCCCCTCGAGAGCAt > 6:300631/1‑148 (MQ=255) agaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCa > 2:365094/1‑131 (MQ=255) agaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCa < 1:365094/131‑1 (MQ=255) gaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCa < 7:125688/149‑1 (MQ=255) aaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 2:73434/149‑1 (MQ=255) aaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 8:349137/149‑1 (MQ=255) aaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 2:318895/149‑1 (MQ=255) aCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGa < 1:414235/149‑1 (MQ=255) aCCCGCGACTGGCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGc > 1:201730/1‑137 (MQ=255) aCCCGCGACTGGCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGc < 2:201730/137‑1 (MQ=255) aCCCGCGACTGGCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAg > 8:279400/1‑148 (MQ=255) cgcgCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGaca > 8:113704/1‑148 (MQ=255) | CCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCG‑TGACCTGCAGAAGCTCTAGGCGTTGTCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACA > NC_002947/1400729‑1401015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |