Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,499,636 T→C 5.9% F17S (TTC→TCC)  zapE → nucleoside triphosphate hydrolase domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,499,6360TC 5.9% 199.6 / 2.6 68F17S (TTC→TCC) zapEnucleoside triphosphate hydrolase domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base T (31/33);  new base C (2/2);  total (33/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.45e-01

TGTTTCGGGCACGCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAGGGCCTGTACTTCTGG  >  NC_002947/1499494‑1499781
                                                                                                                                               |                                                                                                                                                 
tttcgcGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATg                                                                                                                                              <  2:8208/144‑1 (MQ=255)
   cgcGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGAcg                                                                                                                                           >  1:134375/3‑149 (MQ=255)
    gcGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGAcgc                                                                                                                                          >  7:68337/2‑149 (MQ=255)
     cGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGAcgcg                                                                                                                                         >  2:394045/1‑149 (MQ=255)
          acgcccgcTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACgcgg                                                                                                                                        >  6:269605/5‑145 (MQ=255)
          acgcccgcTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACgcgg                                                                                                                                        <  5:269605/141‑1 (MQ=255)
            gcccgcTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATg                                                                                                                                              <  6:230092/135‑1 (MQ=255)
            gcccgcTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATg                                                                                                                                              >  5:230092/3‑137 (MQ=255)
                      acaGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGt                                                                                                                        <  7:69406/149‑1 (MQ=255)
                       caGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTg                                                                                                                       >  7:10589/1‑149 (MQ=255)
                          aCTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACgcggc                                                                                                                                       >  2:166396/1‑130 (MQ=255)
                          aCTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACgcggc                                                                                                                                       <  1:166396/130‑1 (MQ=255)
                            tGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCACATCTGAAACGTCCCGACTTCTTCCAAGACGCGGCGCAGCAAACTGCGCTCCGTCa                                                                                                                  >  8:317968/1‑149 (MQ=255)
                                tGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTc                                                                                                              >  6:291369/1‑149 (MQ=255)
                                 gCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTc                                                                                                              <  6:105679/148‑1 (MQ=255)
                                  ccATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCa                                                                                                                                    <  7:211470/125‑1 (MQ=255)
                                  ccATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCa                                                                                                                                    >  8:211470/1‑125 (MQ=255)
                                  ccATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCa                                                                                                            <  5:291369/149‑1 (MQ=255)
                                    aTTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAgc                                                                                                          >  3:407619/1‑149 (MQ=255)
                                     ttAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTACCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAgcg                                                                                                         >  5:403579/1‑149 (MQ=255)
                                        aGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCCGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGcc                                                                                                       <  1:336296/148‑1 (MQ=255)
                                              ccTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTacga                                                                                                >  2:137686/1‑149 (MQ=255)
                                                        cAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTg                                                                                      <  4:407619/149‑1 (MQ=255)
                                                                  ccGTTTTTTGTTGACTCGCTAACGAATCATGACTACCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACATCCAGCCCCTGTACGACGACCTGGTGCACGCGCAg                                                                             >  4:69075/1‑148 (MQ=255)
                                                                   cGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAg                                                                             <  4:208132/147‑1 (MQ=255)
                                                                   cGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAg                                                                             >  3:208132/1‑147 (MQ=255)
                                                                   cGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGaa                                                                           <  5:89386/149‑1 (MQ=255)
                                                                       ttttGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGaacaa                                                                        <  2:2793/148‑1 (MQ=255)
                                                                       ttttGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGaacaa                                                                        <  4:377106/148‑1 (MQ=255)
                                                                        tttGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGaacaac                                                                       <  1:193153/148‑1 (MQ=255)
                                                                          tgttgCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAAcaacaa                                                                     <  7:214760/148‑1 (MQ=255)
                                                                                cTCGCTAACGAATCATGACTCCCTTAGAAGGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGc                                                              <  7:317968/149‑1 (MQ=255)
                                                                                       aCGAATCATGACTCCCTTAGTACGCTATCAAGCAGATCTGAATCGTCCCGACTTGTTCCATGACGCGGCGGAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTAGGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTc                                                        <  3:69075/148‑1 (MQ=255)
                                                                                           aTCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATg                                                           >  2:51296/1‑141 (MQ=255)
                                                                                           aTCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATg                                                           <  1:51296/141‑1 (MQ=255)
                                                                                                 tcccccTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGtt                                             <  5:384211/146‑1 (MQ=255)
                                                                                                     ccTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTac                                                                                                  >  2:124142/1‑92 (MQ=255)
                                                                                                     ccTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTac                                                                                                  <  1:124142/92‑1 (MQ=255)
                                                                                                     ccTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGtt                                             >  6:384211/1‑145 (MQ=255)
                                                                                                       ttAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTCCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGc                                         >  3:130187/1‑147 (MQ=255)
                                                                                                       ttAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTCCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCaa                                       >  3:124164/1‑149 (MQ=255)
                                                                                                        tAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGc                                         >  3:418810/1‑146 (MQ=255)
                                                                                                         aGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCaag                                      >  7:213816/1‑148 (MQ=255)
                                                                                                         aGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCaag                                      <  8:184138/148‑1 (MQ=255)
                                                                                                           aaCGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATg                                                           <  5:352109/125‑1 (MQ=255)
                                                                                                           aaCGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATg                                                           >  6:352109/1‑125 (MQ=255)
                                                                                                           aaCGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCaagaag                                   <  8:213816/149‑1 (MQ=255)
                                                                                                           aaCGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCaagaag                                   <  3:326100/149‑1 (MQ=255)
                                                                                                           aaCGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGCAAACTGCGGTCCGTCACCTCCAGCGCCTGTACGACGACCTGGTTCACGAGCAGAACAACAAGCCGGGCATGTTCGGAAAGCTGTTCGGCtagaag                                   >  7:349460/1‑149 (MQ=255)
                                                                                                            aCGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCaagaag                                   >  3:242613/1‑148 (MQ=255)
                                                                                                                 aTCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCg                                           <  3:134825/135‑1 (MQ=255)
                                                                                                                 aTCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCg                                           >  4:134825/1‑135 (MQ=255)
                                                                                                                  tCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCa                              <  1:394045/147‑1 (MQ=255)
                                                                                                                  tCAAGCAGATCTGAAACGTCCCGACTTCTCCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCa                              <  4:130187/147‑1 (MQ=255)
                                                                                                                  tCAAGCAGATCTGAAACGTCCCGACTTCTCCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCa                              <  4:124164/147‑1 (MQ=255)
                                                                                                                    aaGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCaa                                                   <  4:210271/124‑1 (MQ=255)
                                                                                                                    aaGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCaa                                                   >  3:210271/1‑124 (MQ=255)
                                                                                                                     aGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTCCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGAAGACTc                         >  7:318453/1‑149 (MQ=255)
                                                                                                                      gCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGACCAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTcc                        >  2:233218/1‑149 (MQ=255)
                                                                                                                         gATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACTACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGt                     <  2:134375/149‑1 (MQ=255)
                                                                                                                         gATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGt                     <  4:242613/149‑1 (MQ=255)
                                                                                                                            cTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTc                    >  3:430539/1‑147 (MQ=255)
                                                                                                                             tGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAg                 <  4:418810/149‑1 (MQ=255)
                                                                                                                              gAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAgg                >  3:63518/1‑149 (MQ=255)
                                                                                                                                aaCGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAGGGc              <  6:403579/149‑1 (MQ=255)
                                                                                                                                aaCGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAGGGc              <  8:84495/149‑1 (MQ=255)
                                                                                                                                   gTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAGGGCCTg           >  1:170735/1‑149 (MQ=255)
                                                                                                                                    tCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGGCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAGGGCCTg           >  5:257694/1‑148 (MQ=255)
                                                                                                                                             cttcCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAGGGCCTGTACTTCtgg  <  1:137686/148‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                 
TGTTTCGGGCACGCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCGGTGCGTCACCTCCAGCGCCTGTACGACGACCTGGTGCACGCGCAGAACAACAAGCCGGGCATGTTCGGCAAGCTGTTCGGCAAGAAGGAGCAGACTCCGGTCAAGGGCCTGTACTTCTGG  >  NC_002947/1499494‑1499781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: