| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,526,571 | G→T | 6.0% | C253F (TGC→TTC) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,526,571 | 0 | G | T | 6.0% | 319.7 / 7.9 | 100 | C253F (TGC→TTC) | ddlB | D‑alanine‑‑D‑alanine ligase B |
| Reads supporting (aligned to +/- strand): ref base G (52/42); new base T (2/4); total (54/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.09e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
AGGTGCTGCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTT > NC_002947/1526424‑1526718 | aGGTGCTGCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAATCTGATCGACCTGACCGCGCGC‑GCCTg < 1:225720/149‑1 (MQ=255) gctgcCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTAGGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGCCCGCGCGC‑GCCTGCGATg > 3:245300/1‑149 (MQ=255) gctgcCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATg > 5:90363/1‑149 (MQ=255) ccgccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAt > 8:130637/1‑149 (MQ=255) cgccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt > 2:133934/1‑149 (MQ=255) cgccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt > 8:109872/1‑149 (MQ=255) aTCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCAt < 1:133934/149‑1 (MQ=255) aTCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCAt < 7:109872/149‑1 (MQ=255) gCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCCCCCAGCCTTCGATGCCAATGGCATCg < 3:205951/149‑1 (MQ=255) cccTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCg > 4:175060/1‑147 (MQ=255) cccTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCg > 1:20052/1‑147 (MQ=255) ccTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAg > 1:262775/1‑149 (MQ=255) ccTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAg > 5:344008/1‑149 (MQ=255) cTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAg < 8:39148/149‑1 (MQ=39) cTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAg < 3:387/149‑1 (MQ=39) gTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑gg > 4:195623/1‑149 (MQ=255) ccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGAt > 4:283111/1‑123 (MQ=255) ccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGAt < 3:283111/123‑1 (MQ=255) ccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCg < 7:130637/149‑1 (MQ=255) cgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCgg > 3:284924/1‑149 (MQ=255) cGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTgg < 4:284924/149‑1 (MQ=255) tgtTCTCCGAGTATGACGCCACGTACATCGTCTACGATCCCCAGTAC‑GGCATCCCGTGCGGTCTGGATAGCGTCAAGGATCAGGAA‑CTGATCGACCTGACCGGGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGAc < 5:209347/149‑1 (MQ=255) cTACGACTATGACTCCAAGTACATCGTAAACGATACCCAGTAC‑CGCATCCCTTGCGGGCTGGATAGAGTCAAGGAACAGGAA‑ATGATAGACCTGACCTCGCGC‑GCCTGCGATGCCATTGGAATCGAAGGCT‑GGGGGCTGTTGGCAGTGa > 3:392112/1‑149 (MQ=255) cTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACGCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGt > 1:84458/1‑148 (MQ=255) cTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGa > 5:223622/1‑149 (MQ=255) aCGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATg > 8:299464/1‑149 (MQ=255) cGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATg < 6:270391/148‑1 (MQ=255) cTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAgg < 8:106657/149‑1 (MQ=255) cTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAg > 3:67734/1‑148 (MQ=255) cTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAg > 7:229691/1‑148 (MQ=255) tATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGa > 7:274857/1‑149 (MQ=255) tATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGa > 5:356175/1‑149 (MQ=255) aTGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGa < 7:201752/103‑1 (MQ=255) aTGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGa > 8:201752/1‑103 (MQ=255) tGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGAc > 5:252176/1‑148 (MQ=255) gACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGAc > 7:412292/1‑147 (MQ=255) aCGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGAGCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAg < 1:226459/149‑1 (MQ=255) cGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAg > 1:187666/1‑148 (MQ=255) tACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGATGGACGTGATGCAGGACGAGCAGGGCCg < 1:244937/149‑1 (MQ=255) cATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGt > 5:118182/1‑149 (MQ=255) tCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTc > 3:333700/1‑149 (MQ=255) tCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTc < 2:262775/149‑1 (MQ=255) cGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCt > 2:399735/1‑149 (MQ=255) tCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCgca < 6:403270/101‑3 (MQ=255) tCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCgca > 5:403270/1‑99 (MQ=255) aaCGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGAt > 8:348685/1‑84 (MQ=255) aaCGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGAt < 7:348685/84‑1 (MQ=255) cGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgctgc > 2:115438/1‑149 (MQ=255) ccAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAg < 1:256249/149‑1 (MQ=255) ccAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAg > 4:34536/1‑149 (MQ=255) ccAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAg > 4:17664/1‑149 (MQ=255) ccAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAg > 8:261299/1‑149 (MQ=255) cAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGt < 6:252176/149‑1 (MQ=255) aGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTc < 6:90363/149‑1 (MQ=255) aGTAC‑CGCATCCCGTGCGGGCTGGATAGCGGCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCGGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTc < 6:106351/149‑1 (MQ=255) tAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCaa > 6:410692/1‑149 (MQ=255) c‑cGCTTCCCGTGCGGGCTGGATAGCGTCAAGGAAGAGGAA‑CTGATCGACCTGACCGCGCTC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGTCGGTTGGACGTGATGCAGGACGATCAGGGCCGGTTCTGGCTGCTCGAAGTCAaca < 4:392112/149‑1 (MQ=255) cGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAacac > 3:59725/1‑149 (MQ=255) cGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAacac > 3:141617/1‑149 (MQ=255) gCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACAcc > 7:10532/1‑149 (MQ=255) aTCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCg > 4:363596/1‑148 (MQ=255) ccGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGTAGGCG‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCAc < 1:73851/148‑1 (MQ=255) gTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAg < 3:17664/149‑1 (MQ=255) gggCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCAt < 4:333700/149‑1 (MQ=255) gggCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCAt < 2:20052/149‑1 (MQ=255) gATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGa > 7:150425/1‑145 (MQ=255) tAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGAt > 1:386278/1‑148 (MQ=255) cGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCa > 6:333280/1‑147 (MQ=255) cGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATa < 4:141617/149‑1 (MQ=255) tCAAGGAACTGGAA‑GTTATCGACCTGACCGCGAGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGCACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGc < 4:245300/149‑1 (MQ=255) tCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGc > 2:184730/1‑149 (MQ=255) cAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGcc > 5:428981/1‑149 (MQ=255) aaGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGcc < 2:84458/148‑1 (MQ=255) aaGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCt < 1:399735/149‑1 (MQ=255) aggaacaggaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTg < 6:223622/149‑1 (MQ=255) acaggaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGc > 4:225940/1‑149 (MQ=255) caggaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGcc < 8:10532/149‑1 (MQ=255) caggaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGcc > 8:346813/1‑149 (MQ=255) aggaa‑cTGTTCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTg < 2:217481/143‑1 (MQ=255) aggaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTg > 1:217481/1‑143 (MQ=255) aggaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGcc > 4:247553/1‑148 (MQ=255) gaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCAt < 5:410692/149‑1 (MQ=255) gaa‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCAt < 7:299464/149‑1 (MQ=255) a‑cTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATgg < 5:205479/149‑1 (MQ=255) aTCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATggcggc < 3:175060/149‑1 (MQ=255) gACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGccc < 8:229691/148‑1 (MQ=255) gACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGccc < 8:150425/148‑1 (MQ=255) aCCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGa < 1:211945/55‑1 (MQ=255) aCCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGa > 2:211945/1‑55 (MQ=255) ccGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCt < 7:346813/149‑1 (MQ=255) cgcgcgc‑gCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTg > 1:118628/1‑149 (MQ=255) cccagcCTTCGATGCCAATGGCATCGCAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGcc > 6:427413/5‑149 (MQ=255) gc‑gcCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTg < 6:356175/149‑1 (MQ=255) gc‑gcCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTg < 8:274857/149‑1 (MQ=255) gc‑gcCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTg < 2:187666/149‑1 (MQ=255) ccTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGAc > 1:7477/1‑149 (MQ=255) ccTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGAc > 8:104166/1‑149 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCgg > 2:109705/1‑137 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCgg < 1:109705/137‑1 (MQ=255) gCGATGCCATTGGCATCGAAGGCTGGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACtt > 1:254166/1‑149 (MQ=255) | AGGTGCTGCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTAC‑CGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAA‑CTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCT‑GGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTT > NC_002947/1526424‑1526718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |