Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,582,780 T→A 7.4% intergenic (‑226/‑32) ttgA ← / → ttgR efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,582,7800TA 7.4% 181.8 / 3.1 64intergenic (‑226/‑32)ttgA/ttgRefflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
Reads supporting (aligned to +/- strand):  ref base T (29/29);  new base A (3/2);  total (32/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.01e-01

GGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCG  >  NC_002947/1582632‑1582926
                                                                                                                                                    |                                                                                                                                                    
ggTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCt                                                                                                                                                      <  5:142340/149‑1 (MQ=255)
  tGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTgc                                                                                                                                                    <  1:268872/149‑1 (MQ=255)
  tGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTgc                                                                                                                                                    <  8:53930/149‑1 (MQ=255)
   ggATAAATAGCTTGATAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCTCTTGATTAGCTTATCCGAGAGGCACCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGAGCTgcg                                                                                                                                                   >  3:18383/1‑149 (MQ=255)
       aaaTAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGATTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGAGTTCCCCGCACGCGCTGCGCGt                                                                                                                                                >  7:349805/1‑148 (MQ=255)
            gCTTGCTAATGAATATACTTACATTCATGGTTGTTTGTATATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGGTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCggg                                                                                                                                           <  4:18383/148‑1 (MQ=255)
            gCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGAACGCGCAGCGCGTGCgggg                                                                                                                                          <  3:47407/149‑2 (MQ=255)
            gCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGAACGCGCAGCGCGTGCgggg                                                                                                                                          <  1:431193/149‑2 (MQ=255)
                gCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAg                                                                                                                                       <  6:295873/148‑1 (MQ=255)
                   aaGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGAt                                                                                                                                     >  8:17263/1‑147 (MQ=255)
                     ggAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAgg                                                                                                                                 <  4:395819/149‑1 (MQ=255)
                       aaTATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGtt                                                                                                                               >  4:188378/1‑149 (MQ=255)
                         tataCTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGt                                                                                                                             <  4:18023/149‑1 (MQ=255)
                              ttACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGc                                                                                                                       >  3:298124/1‑149 (MQ=255)
                                 cATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCa                                                                                                                     <  3:403367/148‑1 (MQ=255)
                                  aTTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATg                                                                                                                   >  5:398573/1‑149 (MQ=255)
                                    tCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGt                                                                                                                 >  7:112955/1‑149 (MQ=255)
                                      aTGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTcc                                                                                                               >  2:308425/1‑149 (MQ=255)
                                              ttgtAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAAc                                                                                                        <  6:398573/148‑1 (MQ=255)
                                              ttgtAAATACTGCTGGGTGGTACAAGGTAAAGCCTCAGCGCTTGATTAGATTATCCGAAAGGACCAGGAAAAGATGACCCCGGAGAGTTCCCCCCACGCGCAGCCGGTTGGGGCAAGATAATGTTGTAATAACATAGTCCGTCGAAca                                                                                                       >  7:65269/1‑147 (MQ=255)
                                                   aaTACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaag                                                                                                   >  8:252890/1‑148 (MQ=255)
                                                        tgctgGGTGGTACTCAGGTACAGCCTCAGCGCTGGATTACCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCAGGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaagaagaag                                                                                             >  6:2951/1‑149 (MQ=255)
                                                          ctgGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGcc                                                                                           >  7:376761/1‑149 (MQ=255)
                                                              gtggtACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTAGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAg                                                                                        <  1:278129/149‑1 (MQ=255)
                                                              gtggtACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGCGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACGAAAGAAGAAGCCCAg                                                                                        >  8:245126/1‑148 (MQ=255)
                                                                 gtACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCTCACGCGCTGCGCGTTCGGGCCAGATGAGGGTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGaaa                                                                                   <  6:107423/149‑1 (MQ=255)
                                                                    cTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCaaa                                                                                                    <  6:238592/130‑1 (MQ=255)
                                                                    cTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCaaa                                                                                                    >  5:238592/1‑130 (MQ=255)
                                                                     tCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAACAAGCCCAGGAAACCCg                                                                               >  4:252176/1‑149 (MQ=255)
                                                                       aGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGt                                                                              <  3:188378/148‑1 (MQ=255)
                                                                       aGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTg                                                                             <  3:141439/149‑1 (MQ=255)
                                                                       aGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTg                                                                             >  6:111123/1‑149 (MQ=255)
                                                                        ggTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGc                                                                            <  7:252890/149‑1 (MQ=255)
                                                                          tACAGCCTCAGCGCTTGATTTGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCGCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCAGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGccc                                                                          <  1:201032/149‑1 (MQ=255)
                                                                           aCAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGcc                                                                           >  8:5548/1‑147 (MQ=255)
                                                                           aCAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGCCCAGATGAGGTTGTACTGCCATGGTCCGTCGCACCAAAGAAGAAGCCCAGCAAACCCGTCCCCa                                                                         >  6:12182/1‑149 (MQ=255)
                                                                                   aGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGatcat                                                                   <  7:17263/147‑1 (MQ=255)
                                                                                     cgcTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAg                                                               >  8:203772/1‑149 (MQ=255)
                                                                                      gcTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCGCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAgg                                                              <  5:12182/149‑1 (MQ=255)
                                                                                           aTTAGCTTATCCGAGAGGCCCCGGCAGTGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAggcggc                                                          <  7:137195/148‑1 (MQ=255)
                                                                                            ttAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGGTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACACCTTCCCAGATCATCGAGgcggcg                                                         >  6:4328/1‑148 (MQ=255)
                                                                                             tAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGCCCAGATGAGGTAGTACTCCCATCGTCCCACGAACCAAAGAAGAAGCCCAGGAAACCCGAGCCCAGATAATCGAGgcggcgc                                                        >  7:410937/1‑147 (MQ=255)
                                                                                                 ttATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAgg                                                   >  1:400005/1‑149 (MQ=255)
                                                                                                   aaccGAGCGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCGGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAggg                                                  <  8:349805/146‑1 (MQ=255)
                                                                                                   aTCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAggg                                                  <  5:111123/148‑1 (MQ=255)
                                                                                                      cGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCtt                                              >  2:20821/1‑149 (MQ=255)
                                                                                                      cGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCtt                                              >  7:103309/1‑149 (MQ=255)
                                                                                                      cGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCtt                                              <  4:298124/149‑1 (MQ=255)
                                                                                                       gagaGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGGCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGAGCATCGAGGCGGCGGAAAGGGCCTTc                                             >  8:66066/1‑149 (MQ=255)
                                                                                                            gCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTAc                                          >  1:375834/1‑147 (MQ=255)
                                                                                                             ccccGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAATCCCAGGACAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACaa                                        <  1:308425/149‑1 (MQ=255)
                                                                                                              cccGGCAGAGGTGCCCCCGGAGCGTTCCCCGGACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGTAAGCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAgc                                      <  5:4328/149‑1 (MQ=255)
                                                                                                              cccGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAgc                                      >  1:279560/1‑149 (MQ=255)
                                                                                                                cGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAgcgc                                    <  2:400005/149‑1 (MQ=255)
                                                                                                                    agagGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAgc                                      <  2:336103/143‑1 (MQ=255)
                                                                                                                    agagGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAgc                                      >  1:336103/1‑143 (MQ=255)
                                                                                                                        gTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTgc                            >  2:104010/1‑149 (MQ=255)
                                                                                                                        gTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTgc                            <  7:5548/149‑1 (MQ=255)
                                                                                                                              ccGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAac                      <  8:112955/149‑1 (MQ=255)
                                                                                                                                    cGTTCCCCGCAAGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGACCCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCt                <  5:2951/149‑1 (MQ=255)
                                                                                                                                          ccGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGa          >  8:98023/1‑149 (MQ=255)
                                                                                                                                          ccGAACGCGCAGCGCGTGCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGa          >  5:442649/1‑149 (MQ=255)
                                                                                                                                           cgaaCGCGCAGCGCGTGCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGa          >  5:370448/4‑148 (MQ=255)
                                                                                                                                               cgcgCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCg     <  1:104010/149‑1 (MQ=255)
                                                                                                                                                  gcTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCg  <  2:279560/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCG  >  NC_002947/1582632‑1582926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: