| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,598,813 | C→A | 7.7% | intergenic (‑52/+79) | dctB ← / ← bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,598,813 | 0 | C | A | 7.7% | 243.2 / 6.3 | 76 | intergenic (‑52/+79) | dctB/bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase |
| Reads supporting (aligned to +/- strand): ref base C (30/40); new base A (2/4); total (32/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCCTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAA > NC_002947/1598666‑1598954 | ggCCTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAAcc > 1:94946/1‑149 (MQ=255) gCCTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAAccc > 6:405423/1‑149 (MQ=255) ccTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTTTTCGC‑GGGTAAAACcg > 2:155312/1‑149 (MQ=255) ccTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCcg > 6:296056/1‑149 (MQ=255) cTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCcgc < 3:408082/149‑1 (MQ=255) cTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCcgc > 2:326350/1‑149 (MQ=255) cTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCcgc < 5:64680/149‑1 (MQ=255) tGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCcgc > 6:95980/1‑148 (MQ=255) gTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCcgcg < 2:94946/147‑1 (MQ=255) gTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCcgc < 5:95980/146‑1 (MQ=255) gTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCgcgc > 4:10479/1‑148 (MQ=255) gTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGcc < 2:287245/149‑1 (MQ=255) tGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGcc > 1:345874/1‑148 (MQ=255) gCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGACt > 1:299406/1‑148 (MQ=255) tGGCCCTGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAg < 1:157727/149‑1 (MQ=255) tGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAg < 7:249812/149‑1 (MQ=255) tGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAg < 6:226673/149‑1 (MQ=255) ggCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAgg > 8:210657/1‑149 (MQ=255) cccAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCGGCCTTTTCGC‑GGGTAAAACCGCGCCTACAGGtg > 7:142673/1‑148 (MQ=255) ccAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTAc > 7:71783/1‑149 (MQ=255) gCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGGTAAACCCGCGCCTACGGGTActc > 2:429717/1‑149 (MQ=255) gCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTActct > 1:40493/1‑149 (MQ=255) cGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTgc < 6:371700/149‑1 (MQ=255) gcgcTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTgcag < 5:296056/149‑1 (MQ=255) gcTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTgcagca < 7:360565/149‑1 (MQ=255) cTGAGTGCGGTACCCAGCACGTTCAGGAGGGTGATCAGCCCCAGACTGAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCAc < 4:334153/149‑1 (MQ=255) cTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCAc < 3:117063/149‑1 (MQ=255) aGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTg < 5:88105/149‑1 (MQ=255) cGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAg < 3:316321/148‑1 (MQ=38) ggTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTTTTCGC‑GGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGgc < 1:155312/149‑1 (MQ=37) ggTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGgc < 3:153475/149‑1 (MQ=255) tACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGgcgc > 5:138304/1‑149 (MQ=255) aCGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTAc < 5:405423/149‑1 (MQ=255) aCGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGCGGGTTTAc < 7:9223/149‑1 (MQ=25) tCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCGGCCTTTTCGC‑GGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGCGGGTTTACCcgc < 8:142673/149‑1 (MQ=21) gcagGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGa > 5:206968/1‑148 (MQ=255) cagGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGaaa < 3:10479/149‑1 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAgg < 6:206968/149‑1 (MQ=255) gATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGt > 3:314230/1‑121 (MQ=255) gATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGt < 4:314230/121‑1 (MQ=255) aTCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCgg < 6:413965/149‑1 (MQ=255) aTCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCg < 1:437765/148‑1 (MQ=255) tCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCgg > 7:168157/1‑148 (MQ=255) gCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAGACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACa < 2:354461/149‑1 (MQ=255) gCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGGGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACa < 1:429717/149‑1 (MQ=255) ccccAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg > 1:300292/1‑149 (MQ=255) ccccAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg > 7:242422/1‑149 (MQ=255) ccAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg‑gc < 5:415233/149‑1 (MQ=255) cAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg‑gcg < 8:242422/149‑1 (MQ=255) cAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg‑g < 1:100454/147‑1 (MQ=255) cAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg‑g > 2:100454/1‑147 (MQ=255) aGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg‑gcgg < 8:71783/149‑1 (MQ=255) gACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAg‑gcggc > 6:347309/1‑149 (MQ=255) cGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCt < 2:290899/149‑1 (MQ=255) gAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTc > 4:293120/1‑148 (MQ=255) ggAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGc < 7:131256/149‑1 (MQ=255) aaaGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAAt > 3:375856/1‑149 (MQ=255) aaaGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAAt < 3:293120/149‑1 (MQ=255) aGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTc < 2:300292/149‑1 (MQ=255) ggCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCa > 1:350587/1‑148 (MQ=255) gCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCa > 4:50576/1‑124 (MQ=255) gCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCa < 3:50576/124‑1 (MQ=255) gCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTctgctg < 2:345874/149‑1 (MQ=255) ggATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTctgctgct < 6:138304/149‑1 (MQ=255) ggATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTctgctgct > 7:16237/1‑149 (MQ=255) tCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGAACCTGTAGGCGCGGTTTTACACGCGAAAAGGCCGGAACAG‑GCGGACTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCa > 6:440644/1‑149 (MQ=255) gtggGATGTCGTGGCCTGCCTCTTCGC‑GGGTAAACCCTCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTg < 5:347309/149‑1 (MQ=255) ggATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGCGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg < 1:326350/148‑1 (MQ=255) ggATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTggg > 4:288188/1‑148 (MQ=255) gATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa > 8:99331/1‑149 (MQ=255) tGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATc < 4:375856/149‑1 (MQ=255) cGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCa > 1:70492/1‑103 (MQ=255) cGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCa < 2:70492/103‑1 (MQ=255) tctTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGa > 7:52313/1‑149 (MQ=255) gc‑gGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAAGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACAtt > 8:27139/1‑148 (MQ=255) c‑gGGTAAACCCGCGCCTACAGGTACTCTGCAGCGCCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGa > 3:292205/1‑149 (MQ=255) gggTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGTACCGCCTGGGAATCCAGCCCTACCTGGACATTGaa < 8:168157/149‑1 (MQ=255) gggTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGaa < 3:404327/149‑1 (MQ=255) | GGCCTGGTGCATGGCCCAGCCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGC‑GGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAG‑GCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAA > NC_002947/1598666‑1598954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |