Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,707,230 | G→C | 11.7% | intergenic (+48/+94) | PP_1501 → / ← PP_1502 | hypothetical protein/OmpA family protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,707,230 | 0 | G | C | 11.7% | 171.0 / 13.5 | 60 | intergenic (+48/+94) | PP_1501/PP_1502 | hypothetical protein/OmpA family protein |
Reads supporting (aligned to +/- strand): ref base G (26/27); new base C (4/3); total (30/30) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 |
TTCGACACCCAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGTTGGAG > NC_002947/1707084‑1707378 | ttCGACACCCAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCgcgg < 5:399232/147‑1 (MQ=255) gACACCCAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGggcggc > 5:181597/1‑149 (MQ=255) acacCCAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTACATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGgcggcg < 3:386850/149‑1 (MQ=255) cccAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTc < 3:111644/149‑1 (MQ=255) cccAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTc > 2:48535/1‑149 (MQ=255) ccAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTc > 3:317808/1‑148 (MQ=255) ccAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGCCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCg < 4:98234/149‑1 (MQ=255) agcagAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGAt < 2:218830/149‑1 (MQ=255) aaaGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTcac < 1:238039/149‑1 (MQ=255) aaGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTcac < 2:129022/148‑1 (MQ=255) ggCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAgg < 6:368553/149‑1 (MQ=255) ggCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGGTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAgg < 3:344369/149‑1 (MQ=255) aCCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGcac < 5:119310/149‑1 (MQ=255) aCCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGca > 7:403822/1‑148 (MQ=255) gCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCacaaca > 3:156972/1‑149 (MQ=255) cTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATc < 8:403822/149‑1 (MQ=255) tggtggACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCg > 1:64045/1‑149 (MQ=255) tggtggACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCg > 3:320470/1‑149 (MQ=255) gtggACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCg < 1:48535/147‑1 (MQ=255) aaCCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACa > 6:366525/1‑148 (MQ=255) gTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑t < 2:407470/149‑1 (MQ=255) tGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑Tc > 5:261877/1‑149 (MQ=255) gcTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGAt > 5:261873/1‑149 (MQ=255) tGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCcgcgatcgacg > 2:187490/1‑142 (MQ=255) aTGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCgg < 2:64045/149‑1 (MQ=255) gggCGAGGAAGCACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCCCG‑ACGATCCCcggg > 4:11800/1‑149 (MQ=39) cGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACaa > 3:144843/1‑120 (MQ=255) cGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACaa < 4:144843/120‑1 (MQ=255) cGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCGATCGA‑CGCGGGGCtt < 1:187490/149‑1 (MQ=255) cGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCtt > 8:63249/1‑149 (MQ=255) gAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTcc < 4:156972/149‑1 (MQ=255) gAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTcc > 6:142283/1‑149 (MQ=255) aaaCACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCt < 2:429678/149‑1 (MQ=255) cacCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTc < 2:383570/149‑1 (MQ=255) acCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCtta > 6:136450/1‑146 (MQ=255) cgGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTa < 5:52819/149‑1 (MQ=255) aGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCCTTCAGCTagcca < 6:181597/149‑1 (MQ=255) gTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTagccagc > 7:296712/1‑149 (MQ=255) gTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCttt > 8:260708/1‑132 (MQ=255) gTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCttt < 7:260708/132‑1 (MQ=255) tGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAgc > 4:213214/1‑149 (MQ=255) tGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAgc < 7:333755/149‑1 (MQ=255) aGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAgcg < 3:11800/148‑1 (MQ=255) tttCGGCGCAGCATTTTTGGCGCCCGGGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTg > 1:233534/1‑148 (MQ=255) ggCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAAcc < 6:66143/148‑1 (MQ=255) agcaTTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATGGTAGCGAACAAAGAAAAAGGCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTg > 1:353641/1‑149 (MQ=38) caTTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCAc > 6:101157/1‑149 (MQ=255) caTTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCAc > 6:327475/1‑149 (MQ=255) tttGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGGTCGCTCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCTCCGAg > 7:317191/1‑149 (MQ=255) gcgcCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTa < 8:212753/123‑1 (MQ=255) gcgcCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTa > 7:212753/1‑123 (MQ=255) gcCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCgtggt < 3:213214/149‑1 (MQ=255) aTCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGc > 4:161750/1‑142 (MQ=255) aTCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGc < 3:161750/142‑1 (MQ=255) tCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATGGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTgg > 7:57187/1‑124 (MQ=255) tCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTgg < 8:57187/124‑1 (MQ=255) gAGCGCCGCCTGCGCGGCGCTCGATCTCGCGGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTgg > 4:367701/1‑149 (MQ=255) aGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGt > 5:63692/1‑149 (MQ=255) ccgcGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTc > 3:5036/1‑149 (MQ=255) cgcgcgGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCg < 4:320470/149‑1 (MQ=255) cgcccgCGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCt > 6:289642/1‑118 (MQ=255) cgcccgCGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCt < 5:289642/118‑1 (MQ=255) gcgggcggCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGttt < 5:327475/149‑2 (MQ=255) gcgggcggCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGTTg > 5:122024/1‑149 (MQ=255) cgggcggCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGTTgg < 8:296712/149‑1 (MQ=255) gggcggCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGTTGga < 2:353641/149‑1 (MQ=255) ggcggcGCTGGATCTCACAGGCGGAACAACATTATCG‑‑GCGACCAAAGAAAA‑‑GCCCCGGG‑TCGATCGCGGGGCTTGTCCTTTCAGCTTGCCAGCCTTACCGCTTAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGTTGgag < 7:63249/149‑1 (MQ=255) ggcggcGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGTTGgag < 2:233534/149‑1 (MQ=255) | TTCGACACCCAGCAGAAAGGCCTGACCGGCGTGCTGGTGGACAACCGCAAGCGCGCGGTGCGCTGCATGGGCGAGGAAACACCGCGGCAGGTGCAGTGAGGTTTCGGCGCAGCATTTTTGGCGCCCGCGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGCACAACATTATCG‑‑GCGAACAAAGAAAA‑‑GCCCCGCG‑TCGATCGCGGGGCTTGTCCTTTCAGCTAGCCAGCCTTAGCGCTGAACCTGGCTCACCGAGCGTGGTGCCACCGGCTGGTTGTCGTTGGAG > NC_002947/1707084‑1707378 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |