| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,713,742 | T→G | 6.1% | intergenic (+11/‑91) | tsaB → / → PP_1508 | endopeptidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,713,742 | 0 | T | G | 6.1% | 201.4 / 4.3 | 66 | intergenic (+11/‑91) | tsaB/PP_1508 | endopeptidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/29); new base G (2/2); total (35/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.88e-01 | |||||||||||
AACCCGGCTGCCTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTTCTCATCGCA > NC_002947/1713594‑1713888 | aaCCCGGCTGCCTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTtcgt < 2:58699/149‑1 (MQ=255) cccGGCTGCCTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTtcgtcg < 7:275155/149‑1 (MQ=255) ccGGCTGCCTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGa < 6:151902/149‑1 (MQ=255) ccTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCg < 6:222684/148‑1 (MQ=255) cTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCCCG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGcc > 5:327433/1‑149 (MQ=255) cTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGcc > 7:188943/1‑149 (MQ=255) ccAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGGCGATAATCGACGAaca < 3:293406/149‑1 (MQ=255) cAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAacac > 6:98424/1‑149 (MQ=255) aaTGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACg < 6:277919/149‑1 (MQ=255) aaTGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACg > 4:415697/1‑149 (MQ=255) ccgctGGACCATCTCAGCCGCGCCCCCGTTGCCTGCGCCCGTGGAGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTa < 4:336408/146‑1 (MQ=255) ctctGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGGCGATAATCGACGAacagcact < 7:286364/148‑6 (MQ=255) tctGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTtcgt < 6:424365/126‑1 (MQ=255) tctGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTtcgt > 5:424365/1‑126 (MQ=255) tctGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAaca < 7:356809/142‑1 (MQ=255) tctGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAaca > 8:356809/1‑142 (MQ=255) tctGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTaa > 7:362926/1‑148 (MQ=255) tatGGACATTATCAGCCTGGCCACCTTTTCCTGGGCCCGTGGCGAGGCAATCCTCGCCGAGCAGGCGCAACACGTTTATCTGCGCCATAATGTAACCACC‑CCCAAGAAGCACAGAGTGCTGTtagtag > 5:404997/3‑126 (MQ=255) gACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAAcc < 3:397180/148‑1 (MQ=255) aCATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCtt < 5:380038/149‑1 (MQ=255) cATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCttt < 1:215339/149‑1 (MQ=255) ctcAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTgcg > 3:341110/1‑149 (MQ=255) ctcAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTgcg > 1:293553/1‑149 (MQ=255) tcAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTgcgc > 1:298359/1‑149 (MQ=255) tcAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTgcgc > 1:315808/1‑149 (MQ=255) cAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTgcgc > 4:116125/1‑148 (MQ=255) gCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCtgtg < 4:218181/149‑1 (MQ=255) aCCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTc < 2:415084/149‑1 (MQ=255) ggCCTGGGGGCGTGGCGAGGGAAGCGTGGCCGAGCAGGCGCATGAGTTTTATCTGCGTGATAATGTAGCCTCT‑CCGATGATGCTCTGAGTGGTGTTCGTTGATTATCGGCATTCTGTCTATAACCTTTTGCGCGATCTGTGGTCCa < 4:54417/145‑1 (MQ=255) gCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGtt < 3:116125/148‑1 (MQ=255) ccTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTAt < 2:298359/149‑1 (MQ=255) ccGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCaa < 3:91455/149‑1 (MQ=255) cGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAg < 4:341110/149‑1 (MQ=255) tGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCa > 1:144040/1‑149 (MQ=255) gAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAg < 2:290456/149‑1 (MQ=255) aGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGc > 5:134587/1‑149 (MQ=255) aaTCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACg > 6:89590/1‑149 (MQ=255) aTCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACgg < 3:415697/149‑1 (MQ=255) gCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAActct > 6:163625/1‑149 (MQ=255) gCCGAGCAGGCGCAACCGGTGTATCTGCGCGATAATGTAGCCACG‑CCCAATAAGCACTGAGTGCTGGTCGTCTATTATCGCCGAACACGATAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACAGAActc < 1:225932/148‑1 (MQ=255) ccGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACGCCCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAActct > 1:308084/1‑149 (MQ=255) ccGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAActct > 7:412531/1‑148 (MQ=255) aGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGAtg > 3:358438/1‑149 (MQ=255) gcgcAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGAtgctgc > 6:282124/1‑148 (MQ=255) gcgcAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGAGATCTTTGGTCCAGTTATCACTCAAGCATTAGCGAAGGAACTCTGAtgctgc > 6:323106/1‑148 (MQ=255) ggacccGGTTTATCTGCGCGATAATGTAGCGCGG‑CCCAAGACGCACTGAGTGCTGTACCTCGATTATCGCCGCACCCGCTAAAACCTGTTGCGCGCTCTGTGGGCCAGTTATCACTCAGGCATTACCTACGCACCTCGGATGCTGCTa > 6:111979/5‑148 (MQ=255) ccGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTg < 6:134587/149‑1 (MQ=255) ggTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGcc < 2:144040/149‑1 (MQ=255) gTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCca > 5:310207/1‑149 (MQ=255) tttATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCca > 5:152816/1‑148 (MQ=255) aTCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCcatcat > 5:300/1‑149 (MQ=255) tCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCAtt > 2:367740/1‑149 (MQ=255) cgcgATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTg < 6:327433/146‑1 (MQ=255) tAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTc < 4:202328/149‑1 (MQ=255) gCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTcat < 2:293553/149‑1 (MQ=255) ccAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTcatgccatgc < 5:163625/149‑1 (MQ=255) ccAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCAATCATTGGTCCTGAGTGATcatgccat > 4:384674/1‑147 (MQ=255) aagaagCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACAAATTGCGCGATATGTGGTCCAGTTATCACTCAAGCATTAGAGACGGAACTCTGATGCTGCTAAATTGCCATCATTGCTCCTGAGTGCTCATGCCATGCg > 2:273110/1‑148 (MQ=255) aagaagCACTGAGTGCTGTTCGTCGATTATCGACGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTCGTCCTGAGTGCTCATGCCATGCg > 2:267007/1‑148 (MQ=255) gCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGa > 4:336999/1‑149 (MQ=255) aCTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACg > 6:307651/1‑149 (MQ=255) gAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTcatgccat < 6:337140/135‑1 (MQ=255) gAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTcatgccat > 5:337140/1‑135 (MQ=255) aGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTc > 6:283219/1‑127 (MQ=255) aGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTc < 5:283219/127‑1 (MQ=255) gTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTtc < 5:89590/149‑1 (MQ=255) gtGTTCGGCGATAATCGACGAACACGCTAAACCCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATCCTGCTAAATTGCCATCATTGGTCCTGAGAGCACCTGCCATGCGTATCGAAGGATTATCa > 5:434402/2‑149 (MQ=255) gtGTTCGGCGATAATCGACGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTTCTCa > 1:27635/2‑149 (MQ=255) cTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTTCTCa < 5:282124/149‑1 (MQ=255) tGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTTCTCAt < 3:336999/149‑1 (MQ=255) gTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTTCTCATc > 2:82739/1‑149 (MQ=255) gtcgATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTTCTCATCGCa < 5:307651/148‑1 (MQ=255) tcgATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTc < 1:325161/106‑1 (MQ=255) tcgATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTc > 2:325161/1‑106 (MQ=255) | AACCCGGCTGCCTTGCCCAATGCTCTGGACATTCTCAGCCTGGCCACCTTTGCCTGGGCCCGTGGCGAGGCAATCGTCGCCGAGCAGGCGCAACCGGTTTATCTGCGCGATAATGTAGCCACG‑CCCAAGAAGCACTGAGTGCTGTTCGTCGATTATCGCCGAACACGCTAAAACCTTTTGCGCGATCTGTGGTCCAGTTATCACTCAAGCATTAGCGACGGAACTCTGATGCTGCTAAATTGCCATCATTGGTCCTGAGTGCTCATGCCATGCGTATCGACGGTTTCTCATCGCA > NC_002947/1713594‑1713888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |