| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,772,788 | C→G | 7.3% | intergenic (+71/‑30) | PP_1580 → / → PP_1581 | hypothetical protein/BNR domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,772,788 | 0 | C | G | 7.3% | 207.8 / 6.6 | 69 | intergenic (+71/‑30) | PP_1580/PP_1581 | hypothetical protein/BNR domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (31/33); new base G (2/3); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.28e-01 | |||||||||||
GGCATTTCCCAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGTCGATC > NC_002947/1772641‑1772929 | ggCATTTCCCAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCg > 4:152783/1‑149 (MQ=255)ggCATTTCCCAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCg > 2:335360/1‑149 (MQ=255) cATTTCCCAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTg < 6:285357/149‑1 (MQ=255) aTTTCCCAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGc < 2:380692/149‑1 (MQ=255) tCCCAGAGATCGTAGTCGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCgg < 2:354840/148‑1 (MQ=255) tCCCAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCggg > 3:329778/1‑149 (MQ=255) ccAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCACGgggcgggc < 2:62449/148‑1 (MQ=255) cAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCtt > 5:381483/1‑149 (MQ=255) cAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCACGgggcgggcag < 3:354985/149‑3 (MQ=255) cAGAGATCGTAGTAGGTGCGCCAATCATTGACTGGGCGATCAACAAGCAATCGCCGGAACCCACATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCtt < 5:387979/149‑1 (MQ=255) agagATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCACGgggcgggcagg < 8:123061/149‑4 (MQ=255) agtagGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCt > 4:48173/1‑149 (MQ=255) gtagGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCt < 1:335360/148‑1 (MQ=255) gtagGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTg < 4:140420/149‑1 (MQ=255) aaTCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATg > 2:183661/1‑149 (MQ=255) tCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATgcg < 6:30379/149‑1 (MQ=255) tgattgGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTa < 4:329778/148‑1 (MQ=255) tgGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTacaaca > 8:313031/1‑149 (MQ=255) gCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGTTCCCATGCGCTACAACACGa < 5:290287/149‑1 (MQ=255) gCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGCTCCCATGCGCTACAACACg > 7:105005/1‑148 (MQ=255) aaGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAAccccg > 3:275167/1‑149 (MQ=255) aaGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAAccccg > 5:54256/1‑149 (MQ=255) aaTGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAAccccgcccc > 3:283742/1‑149 (MQ=255) gCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGag > 3:14604/1‑148 (MQ=255) ggAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGagcagc < 6:216149/149‑1 (MQ=255) ccAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATCCGCTAAAACACGAATAACCCCGCACCGAGCAGCGAccc > 7:25814/1‑149 (MQ=255) aaaTAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGAccc > 4:193694/1‑147 (MQ=255) aaaTAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCga < 4:275167/149‑1 (MQ=255) ccGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCaa < 1:183661/148‑1 (MQ=255) ccGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAAc > 8:142204/1‑149 (MQ=255) ccGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAAc < 5:439936/149‑1 (MQ=255) ccGCAGAGCCGAACCAGCAACGAGATTCAGCCGGTCAGTCCGGAGCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCAGGAGATCCCCTGCGCTACAACAGGAATAGCCGCGCCCCGAGCGGCGACCCGAGAGA‑CTTCAAc > 4:421921/1‑149 (MQ=255) tAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATaa < 4:283742/149‑1 (MQ=255) ccGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAActc > 7:192930/1‑149 (MQ=255) cGAAGCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAActct < 3:421921/149‑1 (MQ=255) gAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAActctc < 4:14604/149‑1 (MQ=255) cAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAAc > 6:236786/1‑102 (MQ=255) cAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAAc < 5:236786/102‑1 (MQ=255) aGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAgcg > 5:86319/1‑149 (MQ=255) aaCGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCCACGCTACCTCTCTAGCGCtt > 2:11253/1‑149 (MQ=255) aCGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTGCAACGATAAGTCTCTAGCGCtt > 2:95964/1‑148 (MQ=255) gagaTTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTtgat < 2:52663/149‑1 (MQ=255) gaTTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTtgatga < 8:281494/149‑1 (MQ=255) aGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGc < 7:397949/148‑1 (MQ=255) gCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCAt < 7:142204/149‑1 (MQ=255) cGGTCAATCCGGATCCTATCGCGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATCCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGC‑CTTCAACGATAACTCTCTAGACCTAGCAGAGGGCATgg > 4:304273/1‑149 (MQ=255) ggTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGc < 7:313031/149‑1 (MQ=255) tCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCt < 6:54256/149‑1 (MQ=255) cGGATCCTATCGAGCCTGCCCGCCCCGTGCTGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTgg < 6:86319/149‑1 (MQ=255) ggATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGACCTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTgg < 1:95964/149‑1 (MQ=255) gATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGaa < 3:152783/149‑1 (MQ=255) ccTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGaa > 1:209341/1‑146 (MQ=255) ccTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGaa < 2:209341/146‑1 (MQ=255) tATCGAGGCTGCCGGCCCCGTGCGTGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGacac < 8:192930/149‑1 (MQ=255) tATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGacac > 3:280487/1‑149 (MQ=255) tATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGacac > 5:78282/1‑149 (MQ=255) aTCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACt > 1:67623/1‑149 (MQ=255) aaaaaagcccgcacGGGGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACtttt > 5:167798/7‑149 (MQ=255) aGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTg > 8:31469/1‑149 (MQ=255) gCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACtt < 3:48173/145‑1 (MQ=255) gCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGt < 7:391606/149‑1 (MQ=255) ccTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGTc > 7:389379/1‑149 (MQ=255) cTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGTc > 5:172360/1‑148 (MQ=255) aagcccgcacGGGGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGTc > 2:49222/3‑148 (MQ=255) tGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGt < 3:188652/146‑1 (MQ=255) tGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGt > 4:188652/1‑146 (MQ=255) cccgcccCGTGCGTGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCTCCCCGAGCAGCGACCCGAGAGA‑CTTCAAGGATAACTCTCTAGCGGTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGTCGATc < 8:25814/149‑1 (MQ=255) gcccCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAActct > 2:89985/1‑97 (MQ=255) gcccCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAActct < 1:89985/97‑1 (MQ=255) | GGCATTTCCCAGAGATCGTAGTAGGTGCGCCAATCATTGATTGGGCGATCAACAAGGAATGGCCGGAACCCAAATAGAACTGCCGCATAGCCGAACCAGCAACGAGATTCAGCCGGTCAATCCGGATCCTATCGAGCCTGCCCGCCCCGTGCGGGCTTTTTTGTGCCTGGAGATCCCATGCGCTACAACACGAATAACCCCGCCCCGAGCAGCGACCCGAGAGA‑CTTCAACGATAACTCTCTAGCGCTTGATGAGGGCATGGCCAGTCTGGAAGACACTTTTGTCGATC > NC_002947/1772641‑1772929 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |