| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,777,524 | C→G | 6.6% | intergenic (+258/+34) | PP_5476 → / ← PP_1585 | hypothetical protein/antidote protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,777,524 | 0 | C | G | 6.6% | 256.3 / 6.7 | 87 | intergenic (+258/+34) | PP_5476/PP_1585 | hypothetical protein/antidote protein |
| Reads supporting (aligned to +/- strand): ref base C (35/45); new base G (2/4); total (38/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
CTTTAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCC > NC_002947/1777377‑1777669 | cTTTAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGcc > 4:16310/1‑149 (MQ=255) tAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCg < 7:256693/148‑1 (MQ=255) tAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCg < 5:85438/148‑1 (MQ=255) tCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGgc > 7:314156/1‑149 (MQ=255) tCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTAATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGGTGTCAGT‑CGCGGGATTATGAGGGAACGATCCTAGCGGCGCCACTCCCGTGgc > 8:409103/1‑149 (MQ=255) cGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGgcg < 1:8021/149‑1 (MQ=255) gTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGcc > 2:39809/1‑149 (MQ=255) tAACTTGGCGTCCCAGGCTTTGATCCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGcccc < 2:355358/148‑1 (MQ=255) aCTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGGGCGTGGCGccgcga < 4:100350/148‑5 (MQ=255) aCTTGGCCGGCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGGGCGTGGCGccgcga < 3:30807/148‑5 (MQ=255) ttGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGtt > 7:376140/1‑148 (MQ=255) ggCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTAt > 5:176123/1‑149 (MQ=255) gCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTAtt < 6:47859/149‑1 (MQ=255) cGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCCTCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTAt < 1:119031/148‑1 (MQ=255) cGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTg < 4:16689/149‑1 (MQ=255) cGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTg < 3:16310/149‑1 (MQ=255) tCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGAt > 2:175977/1‑149 (MQ=255) cccAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCTGGAACGAAACTCGCGGCGCCACGACCGTGGCGCCCCTGTTTATTGAt > 1:383761/1‑148 (MQ=255) cccAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATCATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATc < 1:332235/149‑1 (MQ=255) ccAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGAt > 5:221983/1‑147 (MQ=255) ccAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGAt > 8:74784/1‑147 (MQ=255) ccAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTGTATTGAt > 4:148681/1‑147 (MQ=255) cAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGGGCGTGgcgc < 1:293571/132‑1 (MQ=255) cAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGGGCGTGgcgc > 2:293571/1‑132 (MQ=255) cAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAg > 1:220756/1‑149 (MQ=255) cAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAg > 7:50323/1‑149 (MQ=255) cAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAg > 4:54185/1‑149 (MQ=255) gCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGAt < 8:7156/149‑1 (MQ=255) gCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGAt < 1:208307/149‑1 (MQ=255) gCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGAt < 3:54185/149‑1 (MQ=255) tttGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGAtgt < 8:314156/149‑1 (MQ=255) gATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATgtgt < 2:12310/148‑1 (MQ=255) aTGCCGTAGAGCGTGTAGGGCATTGTGTACATAGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTc < 6:73874/149‑1 (MQ=255) tAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAgg < 3:85087/135‑1 (MQ=255) tAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAgg > 4:85087/1‑135 (MQ=255) tAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGa < 3:349740/149‑1 (MQ=255) tAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTGTATTGATCAGGATGTGTTCAAGCGa > 4:159348/1‑149 (MQ=255) gagCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGAcc < 6:221983/149‑1 (MQ=255) aGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTg > 1:100625/1‑149 (MQ=255) ggTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCACGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTg > 5:138277/1‑148 (MQ=255) gTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGga > 1:134351/1‑149 (MQ=255) gTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGga < 6:220504/149‑1 (MQ=255) gTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGga > 6:165427/1‑149 (MQ=255) tCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCACGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGgac < 6:138277/149‑1 (MQ=255) tgtACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGAccc > 2:304908/1‑149 (MQ=255) gtACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCg > 4:371743/1‑149 (MQ=255) cATTGGGGTTTCAAGTAGCCGCATTCTATCGTTTTTTCGATGTCAGT‑CGCTGTTTTATGCGGGATCGATCCTAGAGGCGCCACGGCAGTGGCTCCCCTGTTTATTGATAAGTATGTGTTCAAGCGACCAGACTCTTGAACGACCCgat < 8:319474/148‑1 (MQ=255) aTTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCgatga < 8:376140/149‑1 (MQ=255) aTTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTCCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCgatga > 4:309300/1‑149 (MQ=255) ttGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCgatgat < 7:74784/149‑1 (MQ=255) ttGGGCTCGCACGTAGCCCCAATCTCTCCGTCTTCCGACGCCAGT‑CGCGGGATTAAGCGGGAACGATCCTCGCGGCGCCACGCCCGGGGCGCCCCTGTTTATTGATCAGGATGTGTTCACGCGACCAGACGCTGGACCGACCCgatgat < 4:32777/149‑1 (MQ=255) ggggTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGAtc < 2:220756/148‑1 (MQ=255) gTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCAt > 8:404078/1‑149 (MQ=255) gCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCCTGGCGCCCCTGATTATTGATCACGATCTGTACAAGCGACCACACGCTGGACCGACACGAAGATCTCATCGc > 8:354469/1‑149 (MQ=255) gTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGCTCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCgtg < 5:435933/149‑1 (MQ=255) gCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCGGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTg < 4:352587/149‑1 (MQ=255) cccAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTACAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCt > 3:347174/1‑149 (MQ=255) ccAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTg > 8:108505/1‑149 (MQ=255) aaTCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGtt < 2:100625/149‑1 (MQ=255) ctcAGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGCCCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCt > 6:213837/1‑149 (MQ=255) tcCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCtg > 3:378870/1‑149 (MQ=255) tcCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACACCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCtg > 8:203793/1‑149 (MQ=255) tcCGTTTTCCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCgg < 3:309300/146‑1 (MQ=255) tttttCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACACCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTgcg < 7:203793/149‑1 (MQ=255) tttCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTgcg > 8:292305/1‑147 (MQ=255) gATGTGAGT‑CGCGGGTTTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATc < 4:378870/149‑1 (MQ=255) gATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGCCCCGAAGATGGCATCGCCGTGTTGCTGTTCGGCTGTgcg > 6:274201/1‑143 (MQ=255) tCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAg < 1:39809/149‑1 (MQ=255) aGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAgg < 7:108505/148‑1 (MQ=255) gcgGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGt < 3:148681/148‑1 (MQ=255) cgGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCt < 7:409103/149‑1 (MQ=255) ggATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGc < 5:165427/149‑1 (MQ=255) aTTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAg < 7:404078/149‑1 (MQ=255) aTGCGGGAACGATCCTCGCTGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGt < 7:354469/148‑1 (MQ=255) cGGGAACGATCCTCGCGGCTCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGtt < 3:219220/106‑1 (MQ=255) gggAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGc > 3:320953/1‑149 (MQ=255) cGATCCTCGCGGCGCCAGGCCCGTGGCGCCAGTGTTTATTGATCAGTATGTGTTCAAGCGACCAGACTGTGGACCTACCCGATGATGTGATCGCCGTGTTGATGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGaa < 1:422029/149‑1 (MQ=255) cGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGaa < 8:50323/149‑1 (MQ=255) aTCCTCGCGGCGCCACGCCCGTGGCGCCCCGGTTTATTGATCAGGATGTGTTCAAGCGACCAGCCGCTGGACCGACCCGCTGATGTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGCTCGAAGGCCGTCTGCAGGTTGAGCCAGAACt > 7:238155/1‑149 (MQ=255) tCCTCGCGGCGCCACGCCCGTGGCGCCCCTGGTTATTGATCAGGATGTGTTCAAGCGCCCAGACGCGGGACCGCCCCGATGATCTCATCGCCGGGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACt > 7:200466/1‑148 (MQ=255) ggggcgCCACGGGCGTGGCGCCGCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAAGTCAgggg > 3:301942/3‑149 (MQ=255) cggcgCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGggt < 1:175977/149‑1 (MQ=255) ggcggcACGCCGGTGGCTCCCATGTTTATTGATAAGGTTGTGTTGAAGCGACCAGACGCTGGACCGACCAGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGTAGGCCGTCTTCAGGTTGAGCCAGAACTCAGGggtt < 2:383761/149‑2 (MQ=255) gcCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTg < 8:384145/88‑1 (MQ=255) gcCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTg > 7:384145/1‑88 (MQ=255) cACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTc < 7:292305/149‑1 (MQ=255) aCGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTc > 4:122143/1‑148 (MQ=255) aCGCCCGTGGCGCCCCTGGTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTGCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTcc < 8:238155/149‑1 (MQ=255) | CTTTAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGT‑CGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACGCCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCC > NC_002947/1777377‑1777669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |