| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,892,528 | G→A | 6.4% | intergenic (+38/‑57) | PP_1697 → / → PP_1698 | transcriptional regulator, GntR family/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,892,528 | 0 | G | A | 6.4% | 276.2 / 5.2 | 93 | intergenic (+38/‑57) | PP_1697/PP_1698 | transcriptional regulator, GntR family/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base G (40/47); new base A (2/4); total (42/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.17e-01 | |||||||||||
GGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAA > NC_002947/1892382‑1892671 | ggtggtCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGcc < 7:85586/149‑1 (MQ=255)ggtggtCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCGTCCCCTGTCTGCGCCGtgctgc > 1:268247/1‑148 (MQ=255) ggtCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACg > 6:355982/1‑149 (MQ=255) gtCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACgg < 2:236685/149‑1 (MQ=255) gtCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACgg < 7:161332/149‑1 (MQ=255) tCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGgc > 1:241714/1‑149 (MQ=255) cGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGgcg > 2:96688/1‑149 (MQ=255) gTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGgcgc < 3:102101/149‑1 (MQ=255) tGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGGCGCa < 3:282092/149‑1 (MQ=255) tGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGGCGCa < 3:207029/149‑1 (MQ=255) gATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCCCCTGTCTGCGCCGTGCTGCCACGGCGCAg > 5:412893/1‑149 (MQ=255) gATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAg > 5:225622/1‑149 (MQ=255) gATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAg > 5:434879/1‑149 (MQ=255) tCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGGCGCAgac < 8:14334/149‑3 (MQ=255) tCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGGCGCAgac < 7:80394/149‑3 (MQ=255) cGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTgg > 5:149994/1‑149 (MQ=255) cGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTgg > 8:194438/1‑149 (MQ=255) gAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCGACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTTTCTGCGCCGTGCTGCCACGGCGCAGGGGc > 4:171278/1‑149 (MQ=255) aGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCt > 7:52041/1‑149 (MQ=255) gCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCt < 3:27297/147‑1 (MQ=255) gCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGc > 8:217049/1‑149 (MQ=255) ccGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGccc > 4:38092/1‑149 (MQ=255) cgATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTc < 6:259264/149‑1 (MQ=255) gATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACCTTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTca < 7:89497/149‑1 (MQ=255) aCGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGGCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACAcc > 8:167992/1‑149 (MQ=255) gCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCa > 7:229349/1‑149 (MQ=255) cGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTTCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCAc > 4:285257/1‑148 (MQ=255) aaaCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGAc > 5:210143/1‑147 (MQ=255) aaaCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGAc > 6:426891/1‑147 (MQ=255) aaCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAg < 3:342959/149‑1 (MQ=255) aCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTTCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGa < 3:285257/149‑1 (MQ=255) ccTCTTGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTGCCGCTACCGCAT‑CGACATTCGTTAAACCGGGCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa < 3:171278/149‑1 (MQ=255) tctGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGAATGCGCCGTGCTGCCACGGCGCAGTGGGTTCGCCAGCCCGTCACACCCACGAATAGAAg > 7:273600/1‑148 (MQ=255) ctGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGa > 2:84421/1‑149 (MQ=255) tGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAgg < 6:312186/147‑1 (MQ=255) ggAATGTCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGAt > 6:211375/1‑148 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATGCGCCATTCGTTAAACCGGGGGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGt > 1:95902/1‑127 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGt < 2:95902/126‑1 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATaa < 3:218358/149‑1 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATaa > 5:338376/1‑149 (MQ=255) aTGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGc < 7:285862/120‑1 (MQ=255) aTGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGc > 8:285862/1‑120 (MQ=255) gcgcCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATc < 8:52041/149‑1 (MQ=255) gcgcCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATc < 3:38092/149‑1 (MQ=255) gcTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGtt < 8:229349/149‑1 (MQ=255) atctggaggCCATGCGCAGCACTTCCGCTACCTCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGTCTTCGCCTGCCCTTCACACCCACGACTAGAAGGATAACAATCATGtt < 1:155590/141‑1 (MQ=255) gcgGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTg < 7:217049/149‑1 (MQ=255) cgGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTgg < 6:338376/149‑1 (MQ=255) aTGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcg > 2:144578/1‑149 (MQ=255) cgcAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcg‑cg < 5:426891/148‑1 (MQ=255) cgcAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑Cga < 5:211375/149‑1 (MQ=255) cagcaCTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑Cgaga < 2:241714/149‑1 (MQ=255) agcaCTTCCGCTACCGCAT‑CGACAATCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGCCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATTACAATCATGTTCAGCTGGTATcg‑c > 7:266438/1‑144 (MQ=255) gcaCTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGAt > 6:307936/1‑148 (MQ=255) gcaCTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGAt > 1:313191/1‑148 (MQ=255) caCTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa > 1:390442/1‑113 (MQ=255) caCTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa < 2:390442/113‑1 (MQ=255) ccGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTcc > 4:7169/1‑148 (MQ=255) cTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACgg < 2:3832/149‑1 (MQ=255) ccGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGaa > 4:369941/1‑149 (MQ=255) cGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAAc < 6:210143/149‑1 (MQ=255) cGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAAc < 6:434879/149‑1 (MQ=255) t‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGc > 5:274711/1‑147 (MQ=255) t‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCaa < 6:395640/149‑1 (MQ=255) cGTTAAACCGGCCGCTGCCCCCTTCACCTGTCTGCGCCGAGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTc < 4:264976/148‑1 (MQ=255) gTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCCGAGATCACCTCACGGGAACGCAAGACATTCt < 1:46166/149‑1 (MQ=255) ttAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTgg < 1:144578/149‑1 (MQ=255) ttAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTgg < 3:412744/149‑1 (MQ=255) aaaCCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGc > 1:156034/1‑149 (MQ=255) aaCCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGc < 6:225622/148‑1 (MQ=255) aaCCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGc < 1:96688/148‑1 (MQ=255) cGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGt > 6:296229/1‑149 (MQ=255) tCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTc < 5:296229/149‑1 (MQ=255) cttcacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggc < 6:274711/149‑1 (MQ=255) ttcacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggcg > 6:204559/1‑149 (MQ=255) acccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCt < 6:412893/149‑1 (MQ=255) cccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTg < 5:307936/149‑1 (MQ=255) cccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTg > 7:76745/1‑149 (MQ=255) ccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGTAGCATAACTATCATGTTCAGCTGGTATCG‑CGAGATCCACTCACGGGACCGCAAGACATTCTGGGCCTCTTTCGGCGGCTgg > 5:115998/1‑149 (MQ=255) ccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTgg > 6:195198/1‑149 (MQ=255) cttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGt < 5:355982/149‑1 (MQ=255) caccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTc < 3:293985/147‑1 (MQ=255) ccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTc < 4:408240/149‑1 (MQ=255) gTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACg < 3:7493/109‑1 (MQ=255) gTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACg > 4:7493/1‑109 (MQ=255) gTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGAt < 8:273600/149‑1 (MQ=255) gTCTGCGCCGTGCTGCCACGGCGCAGTGGCTGCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAAGCCTGTGCCGCTGGTATCG‑CGAGATCACCTCACGGGACCGCAAGACATGCTGGGCCTGTTTCGGCGGCTGGTCGCTCGAt < 2:268247/149‑1 (MQ=255) acTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATg > 8:260221/2‑149 (MQ=255) tGCGCCGTGGCATCACGGCGCAGTCGCTTCGCCTGCCCGTCACACCCACGACTAGAACGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGACCGCAAGACATTCTGGGCCAGTTTCGTCGGCTGGTCGCTCGATgag > 4:328343/1‑147 (MQ=255) tGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGCCATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgcg > 2:377392/1‑149 (MQ=255) cgcCGTGCTGCCAGTGCGCAGGGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CTAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgc < 6:236589/146‑1 (MQ=255) cgcCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCCGCGGCTGGTCGCTCGATgc < 1:84421/146‑1 (MQ=255) gTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTgg > 6:317561/1‑147 (MQ=255) gTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGaa < 3:369941/149‑1 (MQ=255) | GGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCAT‑CGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCG‑CGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAA > NC_002947/1892382‑1892671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |