| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,899,807 | A→T | 8.6% | K120* (AAG→TAG) ‡ | PP_1703 → | assimilatory nitrate reductase/sulfite reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,899,807 | 0 | A | T | 8.6% | 275.3 / 12.6 | 93 | K120* (AAG→TAG) ‡ | PP_1703 | assimilatory nitrate reductase/sulfite reductase |
| Reads supporting (aligned to +/- strand): ref base A (38/47); new base T (2/6); total (40/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
CAGCCAGCCGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCT > NC_002947/1899659‑1899955 | cagccagcCGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGAACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCcaaca < 1:309018/149‑1 (MQ=255) agccagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCcaacaa < 2:396490/149‑1 (MQ=255) gccagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAg > 1:209178/1‑149 (MQ=255) ccagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGt > 2:9113/1‑149 (MQ=255) ccagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGt > 6:323115/1‑149 (MQ=255) cagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGtt < 2:209178/149‑1 (MQ=255) agccGCCAGTGCGCGCCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 5:137868/149‑1 (MQ=255) agccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg > 1:164079/1‑149 (MQ=255) agccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 8:146032/149‑1 (MQ=255) agccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 7:358890/149‑1 (MQ=255) agccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 7:17318/149‑1 (MQ=255) gccgccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTgg < 2:164079/149‑1 (MQ=255) cgccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGAACCTGGCCAACAAGTTGGcc < 8:122402/149‑1 (MQ=255) gccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACTTGTTGGCCa < 7:354979/149‑1 (MQ=255) gccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGcc > 4:215554/1‑148 (MQ=255) gccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGcc > 1:82683/1‑148 (MQ=255) ccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACTTGTTGGCCag < 5:325555/149‑2 (MQ=255) ccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGcc > 4:403551/1‑147 (MQ=255) ccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCa > 4:686/1‑148 (MQ=255) cAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACTTGGCCAACTTGTTGGCCagg < 4:267058/149‑3 (MQ=255) cAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACTTGTTGGCCagg < 7:175338/149‑3 (MQ=255) tGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGc > 1:56376/1‑149 (MQ=255) cgcACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCATGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑t < 3:149793/148‑1 (MQ=255) cgcACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACTTGTTGGCCaggtact < 5:168921/148‑7 (MQ=255) gcACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑ttt < 1:169749/149‑1 (MQ=255) gCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCg > 8:301626/1‑148 (MQ=255) cATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGTATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTa > 7:72680/1‑149 (MQ=255) gACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTAcgcg < 2:33134/149‑1 (MQ=255) aCCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACgcgc < 4:95225/149‑1 (MQ=255) ccAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGcc < 2:82683/149‑1 (MQ=255) ccAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGcc < 3:80653/149‑1 (MQ=255) cAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCca > 5:135001/1‑149 (MQ=255) cGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGt > 5:56639/1‑149 (MQ=255) gCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGt < 6:56639/148‑1 (MQ=255) gCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTc < 5:323115/149‑1 (MQ=255) gCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTc < 1:9113/149‑1 (MQ=255) cTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTTTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTcc < 3:686/149‑1 (MQ=255) tGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTcc > 6:44039/1‑148 (MQ=255) aCCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTc < 6:99226/149‑1 (MQ=255) ccgccgAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTcg < 8:38860/149‑1 (MQ=255) cgccgAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACTTGTTGGCCag > 6:407228/1‑110 (MQ=255) cgccgAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACTTGTTGGCCag < 5:407228/111‑2 (MQ=255) ccgAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCgcgc > 3:369673/1‑149 (MQ=255) gAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCcac < 1:373967/129‑1 (MQ=255) gAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCcac > 2:373967/1‑129 (MQ=255) gTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGc < 2:320507/149‑1 (MQ=255) gcgcGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATgg > 7:379842/1‑149 (MQ=255) cgcgGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATg < 5:111958/147‑1 (MQ=255) ggCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccag > 3:3224/1‑149 (MQ=255) gCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTACCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagc < 2:49773/149‑1 (MQ=255) catcatCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagcg < 3:424366/149‑1 (MQ=255) atcGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagcgccag > 4:338941/1‑149 (MQ=255) gCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGc > 8:100987/1‑148 (MQ=255) cACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTa > 6:97868/1‑149 (MQ=255) ctgCCTGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAATTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACa < 2:352729/147‑1 (MQ=255) ggCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTAc > 4:207660/1‑147 (MQ=255) ggCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACaa < 5:44039/149‑1 (MQ=255) ccGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCt > 2:86696/1‑149 (MQ=255) ggATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGt < 5:132660/149‑1 (MQ=255) ccGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCtt < 6:135001/149‑1 (MQ=255) cGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTg < 8:165433/149‑1 (MQ=255) tgtCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCa > 1:61870/1‑149 (MQ=255) cGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCt < 2:147403/148‑1 (MQ=255) cGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTg > 4:25449/1‑149 (MQ=255) ggCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTgg > 3:330096/1‑148 (MQ=255) gCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCa > 5:235639/1‑149 (MQ=255) gCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCa < 8:379842/149‑1 (MQ=255) aaaTGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGTCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGAGCCGATGGCCCACATGGAAGt > 8:373909/1‑149 (MQ=255) aaaTGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGt < 3:215554/149‑1 (MQ=255) aaaTGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTA‑AAGCGGTACGATTGCGGCCG‑TGGCCCCCCAGGCCGtt > 7:319288/1‑149 (MQ=255) tGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTAc < 7:373909/149‑1 (MQ=255) tCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCa < 3:338941/149‑1 (MQ=255) tCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCa < 2:56376/149‑1 (MQ=255) cGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAg < 7:151153/149‑1 (MQ=255) gCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACaa < 6:419110/108‑1 (MQ=255) gCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCAc > 6:367247/1‑134 (MQ=255) gCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCAc < 5:367247/134‑1 (MQ=255) cTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGa < 5:97868/149‑1 (MQ=255) cTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGa > 5:74003/1‑149 (MQ=255) cTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGa < 5:259312/149‑1 (MQ=255) cTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGa < 5:265305/149‑1 (MQ=255) ggCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCCGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCg < 4:369673/149‑1 (MQ=255) gCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATg > 6:131530/1‑121 (MQ=255) gCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATg < 5:131530/121‑1 (MQ=255) ccAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAg > 1:60084/1‑149 (MQ=255) cttGGCCAACTTGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGcc > 4:78122/3‑148 (MQ=255) ccTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGcc > 5:292971/1‑148 (MQ=255) cTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGa > 5:384006/1‑149 (MQ=255) cTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGa < 4:330096/149‑1 (MQ=255) gCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGt < 2:60084/149‑1 (MQ=255) ccAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTa > 5:384408/1‑149 (MQ=255) ccAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTa > 2:316789/1‑149 (MQ=255) caacaaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAt > 3:62942/1‑149 (MQ=255) caacaaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAt > 1:299031/1‑149 (MQ=255) caacaaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAt < 3:207660/149‑1 (MQ=255) aacaaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAtt > 8:153324/1‑149 (MQ=255) aacaaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAtt > 8:210787/1‑149 (MQ=255) acaaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAttt < 4:62942/149‑1 (MQ=255) caaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTc > 4:424546/1‑149 (MQ=255) aaGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCt < 1:86696/149‑1 (MQ=255) | CAGCCAGCCGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGC‑TTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGT‑CGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCT > NC_002947/1899659‑1899955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |