| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,962,576 | G→C | 5.0% | S280T (AGT→ACT) | PP_1760 → | ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,962,576 | 0 | G | C | 5.0% | 258.7 / 2.7 | 79 | S280T (AGT→ACT) | PP_1760 | ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (33/42); new base C (2/2); total (35/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
GCTTTACCCAGGCGCTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAA > NC_002947/1962429‑1962724 | gcTTTACCCAGGCGCTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTTGACTCGCAATGGAAAAGCGATGCCAGt < 1:178516/149‑1 (MQ=255) cAGGCGCTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGc > 1:321701/1‑149 (MQ=255) cAGGCGCTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGc < 5:50219/149‑1 (MQ=255) cgcTAGCGGAAAGGCTCGTTGCGATCCTGGAAATCCGCGCCGGCATCCGCCAGGGCTACTTCCTTGGCGGCCTGTGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTTGACTCGCAATGGAAATGCGATGCCAGTGGCGGTGCCAGt < 8:394311/149‑1 (MQ=255) gCGGAAACCCTCGATGCCATCCAGGAACTCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCc‑t < 3:253629/149‑1 (MQ=255) cGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCc‑t‑g > 1:23844/1‑149 (MQ=255) ggAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCACTGGCACGGCCACTGGcat > 4:118761/1‑145 (MQ=255) ggAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCACTGGCACGGCCACTGGcat < 3:118761/147‑3 (MQ=255) ccTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGTCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTc > 4:168492/1‑148 (MQ=255) ccTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTc > 2:42878/1‑148 (MQ=255) cGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGt > 7:367386/1‑149 (MQ=255) gATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGTCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGtt < 3:168492/149‑1 (MQ=255) gATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGt < 6:296173/148‑1 (MQ=255) tGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCg < 3:86793/149‑1 (MQ=255) tGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACACCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCg < 1:49033/149‑1 (MQ=255) cATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCa > 5:192753/1‑149 (MQ=255) aTCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCAt > 3:19672/1‑149 (MQ=255) aTCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTCCCTTGGCCGCCTGGGCTTGCGAGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCAt > 8:293935/1‑149 (MQ=255) aGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGa < 3:167133/148‑1 (MQ=255) aGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGa > 4:167133/1‑148 (MQ=255) aGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGAc < 8:145308/149‑1 (MQ=255) cgcgCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCcg > 7:247768/1‑149 (MQ=255) cgcgCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACCCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTcc < 8:32214/148‑1 (MQ=255) cgcgCCGGCAACCGCCAGGGCTACATCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCcg > 7:269554/1‑149 (MQ=255) cGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATc > 5:435237/1‑139 (MQ=255) cGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATc < 6:435237/139‑1 (MQ=255) ggCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGTTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCgcggc < 3:64286/149‑1 (MQ=255) gCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAACAGC‑AGGCCACTGGCACGGCCACTGGCA‑TCGCTTTTCCatt < 7:96983/123‑3 (MQ=18) gCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAACAGC‑AGGCCACTGGCACGGCCACTGGCA‑TCGCTTTTCCatt > 8:96983/1‑121 (MQ=18) gCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCgcggcg > 8:4467/1‑149 (MQ=255) cAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGcggcgg > 3:429879/1‑149 (MQ=255) aaCCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGAc > 3:182137/1‑132 (MQ=255) aaCCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGAc < 4:182137/132‑1 (MQ=255) aaCCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCggcggc > 5:429564/1‑149 (MQ=255) aaCCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCggcggc > 4:376081/1‑149 (MQ=255) aaCCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCggcggc > 6:71150/1‑149 (MQ=255) ccGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCa < 1:300878/149‑1 (MQ=255) cGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCAt < 3:176823/149‑1 (MQ=255) gcAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGCGCGCGATTACGCGGTTGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCGAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGc < 6:319367/148‑1 (MQ=255) gCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCa > 1:62193/1‑109 (MQ=255) gCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCa < 2:62193/109‑1 (MQ=255) cTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGc > 1:333436/1‑149 (MQ=255) ccTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCt < 7:123186/147‑1 (MQ=255) ccTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTg < 4:364745/148‑1 (MQ=255) ggCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGtttt < 5:71150/148‑1 (MQ=255) gccgccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTcc < 2:321701/149‑1 (MQ=255) gccgccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTcc < 2:23844/149‑1 (MQ=255) ggCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGt < 6:429564/148‑1 (MQ=255) gCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCg < 6:402110/149‑1 (MQ=255) gCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCGTCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCg > 7:185184/1‑149 (MQ=255) tGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGcc < 3:193636/149‑1 (MQ=255) ccGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGa < 6:192753/149‑1 (MQ=255) cgcgAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGAt > 8:288529/1‑149 (MQ=255) cgcgAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGAt < 1:230224/149‑1 (MQ=255) ggTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTgg < 4:429879/149‑1 (MQ=255) cgcgATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGgt < 8:367386/149‑1 (MQ=255) cgcgATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGgt > 2:384428/1‑149 (MQ=255) cgATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGgtgt < 3:376081/149‑1 (MQ=255) tACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCa < 7:288529/148‑1 (MQ=255) aCGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGCCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAg < 2:333436/148‑1 (MQ=255) cGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGc < 1:384428/148‑1 (MQ=255) cGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCt < 7:293935/149‑1 (MQ=255) cGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCGT‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTAc > 1:315184/1‑149 (MQ=255) gTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCt > 6:284215/1‑149 (MQ=255) ctcTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCtgt < 7:319761/146‑1 (MQ=255) tCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTAGATCGGCCAGATGCTGGCGGTGTTCAGCTACCtgt > 8:319761/1‑145 (MQ=255) gCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTc < 1:42878/148‑1 (MQ=255) gCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCa > 2:430191/1‑149 (MQ=255) gCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCa > 3:196202/1‑149 (MQ=255) cAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCAt < 7:4467/149‑1 (MQ=255) cAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCAt > 1:48564/1‑149 (MQ=255) aaTGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCAt > 7:179560/1‑148 (MQ=255) aaTGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCAt > 5:205421/1‑148 (MQ=255) gAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGAtag > 5:340358/1‑147 (MQ=255) gAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCg < 5:284215/149‑1 (MQ=255) gAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCg > 8:66206/1‑149 (MQ=255) gATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGt < 8:247768/149‑1 (MQ=255) gATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGt < 8:269554/149‑1 (MQ=255) ccAGGGGCCGTGCCAGTGGCC‑G‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAg < 4:248142/149‑1 (MQ=255) gTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCaa < 1:430191/149‑1 (MQ=255) | GCTTTACCCAGGCGCTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCC‑T‑GCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAA > NC_002947/1962429‑1962724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |