| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,973,872 | A→T | 5.8% | intergenic (+29/‑119) | gyrA → / → serC | DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,973,872 | 0 | A | T | 5.8% | 204.9 / 2.7 | 69 | intergenic (+29/‑119) | gyrA/serC | DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (35/29); new base T (2/2); total (38/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.47e-01 | |||||||||||
GCCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCG > NC_002947/1973726‑1974018 | gCCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAgg < 1:214515/149‑1 (MQ=255) ccGTCCGAGCACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGt < 7:202563/149‑1 (MQ=255) cGTCCGAGGACGAACTCGTTGTAGTGATCGAGACGGACGAGGATGGTTTCGAGGCTGTAGCGACAGACAATGAAAATTAATATTCTGCCGGTGCAGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCTTGGCG‑ACCAAGGTc < 6:282206/149‑1 (MQ=255) cGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTc < 8:318883/149‑1 (MQ=255) gAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCTTGGTCAcccc < 8:365081/149‑1 (MQ=255) gAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGcccc > 3:46668/1‑149 (MQ=255) gACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGtt > 2:92809/1‑149 (MQ=255) gAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGa < 4:189655/149‑1 (MQ=255) aaCTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGAc < 1:8197/149‑1 (MQ=255) cTCGATGAAGTGATCGAGACGGACGAGGAGGATGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACtg > 1:46607/1‑149 (MQ=255) gATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACtgtg > 6:111200/1‑148 (MQ=255) gATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACtgtg < 1:92809/148‑1 (MQ=255) aTCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCTCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCggg > 3:266147/1‑149 (MQ=255) aTCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTACACCCGAGCGGGGCG‑ACCAAGGTAGCCCCGTTTGACTGTGTAGGAGAggg > 6:94525/1‑149 (MQ=255) gacggacgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAACCCCGAGCGGGGCG‑ACCACGGTCGCGCCGTTTGCCTGTGTAGGAGCGGGCTTGc > 8:200352/1‑149 (MQ=255) gacggacgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGc < 3:212699/149‑1 (MQ=255) ggacgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCcg < 4:46668/149‑1 (MQ=255) gacgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGct > 8:220223/1‑137 (MQ=255) gacgAGGAGGGTGTCGAGGCTGTAGAGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGGAGCCCAGTTTGACTGTGTATGAGCg > 8:214132/1‑138 (MQ=255) acgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCcgc > 5:155609/1‑148 (MQ=255) ggaggGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGtt < 5:377086/117‑1 (MQ=255) ggaggGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGtt > 6:377086/1‑117 (MQ=255) tCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGAACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGcc < 1:336978/149‑1 (MQ=255) gAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCAcc > 3:359894/1‑149 (MQ=255) gCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGAt > 7:54952/1‑149 (MQ=255) tGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGTCTGTGTAGGAGCCGGCTTGCACGCGATGCAGGCGCCCCCGATcc > 3:40112/1‑149 (MQ=255) gcgcCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCTAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGc < 7:280211/148‑1 (MQ=255) ccAGACAATGAAAATGAAGAAGCTGCAGGTGCCGATGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATg > 6:196997/1‑148 (MQ=255) gACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAAt < 5:187351/149‑1 (MQ=255) atgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTgg < 3:156956/149‑1 (MQ=255) gaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTgggc > 7:230198/1‑147 (MQ=255) aaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCa > 7:231704/1‑149 (MQ=255) aaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCa < 2:46607/148‑1 (MQ=255) gaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTa > 7:21700/1‑149 (MQ=255) gCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGAttt > 4:302458/1‑149 (MQ=255) aGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTg < 4:170352/149‑1 (MQ=255) gacgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAATGTAGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCCATCCGGCATGGAATGTGGGCCCCGAATTACGATGTTGGTCTAtt > 8:407456/1‑149 (MQ=255) acgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTAtt < 8:374543/148‑1 (MQ=255) acgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGGTTGACTGTGTAGGCGCGGGCTTGCCCGCGATGCAGGCGGCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTAttt > 7:374543/1‑149 (MQ=255) cgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTg > 2:42336/1‑149 (MQ=255) cgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTg < 4:359894/149‑1 (MQ=255) gCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCag < 6:155609/149‑1 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCagag > 2:119280/1‑149 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCagag > 8:214072/1‑149 (MQ=255) cGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCg < 1:42336/149‑1 (MQ=255) gCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCga < 3:335545/149‑1 (MQ=255) agtaagCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTTGCCGCGATGCAGGCGCCACCGATCCTGCATGGGATGTGGCCACCGAATTAAGATTTTGTTGTATTTGGCAGTGGGAGAGTGGAtg > 8:221592/1‑149 (MQ=255) gtaagCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGAtgt < 4:266147/149‑1 (MQ=255) agCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGtt > 3:336225/1‑120 (MQ=255) agCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGtt < 4:336225/120‑1 (MQ=255) agCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGa < 8:21700/148‑1 (MQ=255) gCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAg > 6:395373/1‑148 (MQ=255) tAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCaaa > 3:272019/1‑149 (MQ=255) aaCCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAAc < 5:111200/148‑1 (MQ=255) aCCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGACCCCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGa > 6:108770/1‑149 (MQ=255) aCCCGAGCGGGGCG‑ACCAAGGTAGCCCCGTTTGCCTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCAGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGAAGTGAGCAAAc > 4:329417/1‑147 (MQ=255) ccGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGc > 5:422062/1‑149 (MQ=255) ccGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGc > 4:47293/1‑149 (MQ=255) ccGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGc < 8:54952/149‑1 (MQ=255) aaacGGGGCG‑ACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCaga > 4:121015/4‑121 (MQ=255) aaacGGGGCG‑ACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCaga < 3:121015/118‑1 (MQ=255) gCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCttt < 5:395373/149‑1 (MQ=255) gggCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAAc < 4:40112/149‑1 (MQ=255) gggCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCCATCCTGCATCGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAAc > 8:115355/1‑149 (MQ=255) ggCG‑ACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACt > 6:379760/1‑149 (MQ=255) gCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACtt > 8:38021/1‑149 (MQ=255) g‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCt < 4:272019/149‑1 (MQ=255) cAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgcg > 2:393023/1‑149 (MQ=255) cAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCAACGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgag > 2:113145/1‑147 (MQ=255) | GCCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCG‑ACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCG > NC_002947/1973726‑1974018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |