| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,281,633 | G→C | 7.1% | G152A (GGC→GCC) ‡ | PP_2009 → | 1‑aminocyclopropane‑1‑carboxylate deaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,281,633 | 0 | G | C | 7.1% | 269.9 / 10.1 | 84 | G152A (GGC→GCC) ‡ | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
| Reads supporting (aligned to +/- strand): ref base G (40/38); new base C (4/2); total (44/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01 | |||||||||||
GCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCATG > NC_002947/2281487‑2281776 | gCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGACCCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCAGCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCt < 6:249404/149‑1 (MQ=255) cgcTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCa < 1:417993/149‑1 (MQ=255) ggCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGGGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTg < 5:256374/147‑1 (MQ=255) gCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATc < 4:135135/149‑1 (MQ=255) cATGGATCTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCa < 3:135789/149‑1 (MQ=255) cATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCa > 7:136332/1‑149 (MQ=255) attgAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGCGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCa < 1:84495/146‑1 (MQ=255) aTGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCAc > 4:234688/1‑142 (MQ=255) aTGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCAc < 3:234688/142‑1 (MQ=255) tGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATg < 8:136332/149‑1 (MQ=255) tcccTGCTTTTGCTCTGCTACCGCGGCTACCTGGCCTGCAACGTACCCGGGTTTTTGGCACCTTGGCATTCGCGCTTTCCTGGCTGTCACTGCATCTCCGTAG‑GGGGCGGTGGGTTGGCCGGTGCGCAGGGCTGCGCACTGATCATg < 8:272428/144‑1 (MQ=255) gAACTGCATTGGCTATGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgca < 5:205150/149‑1 (MQ=255) cTGGATTGGCTAGGCTACTGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGATCCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgcagca < 8:340284/149‑1 (MQ=255) gCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgcagcatg > 3:290870/1‑147 (MQ=255) cATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑Ggc > 7:256514/1‑149 (MQ=255) ttGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCGAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑Ggcgc < 8:405700/149‑1 (MQ=255) gctaggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑Ggcgcgcg > 4:30570/1‑149 (MQ=255) gctaggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑Ggcgcgcg > 3:410031/1‑149 (MQ=255) gctaggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCAGTGCGCAGCCCTGCGCAccgg < 4:422350/131‑4 (MQ=255) gctaggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCAGTGCGCAGCCCTGCGCAccgg > 3:422350/1‑128 (MQ=255) aggctaCGGCGGCTACCGTGCACTAAACGAACCCGTCTTCTGTGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGTCTGGCCGGTGCGCAGGGCTGCGCAc < 8:139897/125‑1 (MQ=255) aggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGACTGGCCGGTGCGCAGGGCTGCGCAc > 7:139897/1‑125 (MQ=255) ggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑Ggcgcgcgc > 3:294529/1‑146 (MQ=255) ggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑Ggcgcgcgc < 4:294529/146‑1 (MQ=255) gctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑Ggcgcgcgcg > 2:262116/1‑146 (MQ=255) ctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATc < 4:265111/127‑1 (MQ=255) ctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATc > 3:265111/1‑127 (MQ=255) ctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTCCGCACTGATCATGCAGCA‑GGCGCGCGCGCAg > 4:147701/1‑148 (MQ=255) gcggcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGCTcgcg > 8:199438/1‑149 (MQ=255) gcggcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGACTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATcgcg < 3:332327/149‑1 (MQ=255) cggcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCgg < 2:107392/149‑1 (MQ=255) ggcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCgg > 4:335322/1‑148 (MQ=255) gcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGa > 1:424335/1‑149 (MQ=255) tACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGAtt > 8:38679/1‑149 (MQ=255) ccGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCTGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGAtt < 4:81569/147‑1 (MQ=255) ccGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTgg > 3:98057/1‑149 (MQ=255) ccGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTg < 4:48215/148‑1 (MQ=255) gTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGc > 6:163486/1‑149 (MQ=255) gTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGc < 1:334196/149‑1 (MQ=255) gCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCAACCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGt > 5:320071/1‑147 (MQ=255) taaCGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGt > 7:33390/2‑146 (MQ=255) cAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GCGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGt > 8:74256/1‑146 (MQ=255) aCCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGTTGGCCGGTGCGCAGGGCTGCGCACTTATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCAt < 3:143587/148‑1 (MQ=255) ccGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGAGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGAc > 2:70573/1‑149 (MQ=255) cTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCtggt > 1:251102/1‑149 (MQ=255) gggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCtggtgg > 2:197112/1‑149 (MQ=255) gggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCtggtgg > 7:165014/1‑149 (MQ=255) cTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTggctggct > 5:206163/1‑149 (MQ=255) cTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTggctggct < 3:30570/149‑1 (MQ=255) ttGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGgctggctg > 5:214115/1‑149 (MQ=255) gcgcTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGAGGCCTGGTGGCTGGCTGCCGGAACgg < 7:125740/149‑1 (MQ=255) cgcTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACggg < 4:98057/149‑1 (MQ=255) cgcTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACggg < 8:33390/149‑1 (MQ=255) tATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGAc > 8:307785/1‑149 (MQ=255) aGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCt > 3:313753/1‑149 (MQ=255) aGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCt > 5:281552/1‑149 (MQ=255) gCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCtt < 6:281552/148‑1 (MQ=255) gCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTg > 2:299364/1‑149 (MQ=255) ggCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTggcc > 1:217907/1‑149 (MQ=255) aCTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTggccggc > 1:184334/1‑149 (MQ=255) aCTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTggccggc < 1:197112/149‑1 (MQ=255) cTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTggccggcc < 6:206163/149‑1 (MQ=255) cTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTggccggcc < 2:424335/149‑1 (MQ=255) cATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCtt < 7:307785/148‑1 (MQ=255) cccGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTAc < 8:256514/148‑1 (MQ=255) cccGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACt > 7:52857/1‑149 (MQ=255) cccGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCAATGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACt > 7:349719/1‑149 (MQ=255) ccGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTg > 3:53840/1‑149 (MQ=255) cggcggGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCgg > 2:330393/1‑149 (MQ=255) cggcggGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCgg < 3:339285/149‑1 (MQ=255) gcggGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGt < 3:147701/149‑1 (MQ=255) atgatcagTGCGCAGCCCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGcaca > 4:383115/8‑149 (MQ=255) tcagTGCGCAGCCCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTCCCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGcc > 6:256664/4‑149 (MQ=255) ggTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGt > 2:79928/1‑149 (MQ=255) gTGCGCAGCCCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTg > 2:393692/1‑149 (MQ=255) tGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGc < 4:410031/149‑1 (MQ=255) tGCGCAGCCCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGc < 3:383115/149‑1 (MQ=255) gcgcAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCa < 3:335322/149‑1 (MQ=255) cgcAGGGCTGCGCACTGATCATGCAGCAGGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCa > 1:253504/1‑149 (MQ=255) tcAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGTCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCATTGTACTGGCCGAGGCGGGTGCACATGCCGTGCATg < 7:74256/148‑1 (MQ=255) gcAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGAc > 6:166449/1‑99 (MQ=255) gcAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGAc < 5:166449/99‑1 (MQ=255) cAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTg < 1:378978/115‑1 (MQ=255) cAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTg > 2:378978/1‑115 (MQ=255) ggCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGTCTGGCTGCCGGAACGGGGACTACCTTggccggc < 4:254565/108‑1 (MQ=255) ggCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTggccggc > 3:254565/1‑108 (MQ=255) | GCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAG‑GGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCA‑GGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCATG > NC_002947/2281487‑2281776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |