| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,415,307 | C→T | 9.1% | intergenic (+43/‑18) | tusA‑II → / → pdxB | sulfurtransferase/erythronate‑4‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,415,307 | 0 | C | T | 9.1% | 240.8 / 10.6 | 88 | intergenic (+43/‑18) | tusA‑II/pdxB | sulfurtransferase/erythronate‑4‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (38/42); new base T (4/4); total (42/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.33e-01 | |||||||||||
CCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCCTGCTGGTGCG > NC_002947/2415159‑2415455 | ccgccgCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTcc < 2:431344/149‑1 (MQ=255) gccgcGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTcccc < 7:96007/149‑1 (MQ=255) gccgcGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTcccc < 5:80305/149‑1 (MQ=255) gccgcGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTccc > 1:14599/1‑148 (MQ=255) ccgcGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTccc > 5:241470/1‑147 (MQ=255) cgACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCTCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGAc < 2:131900/149‑1 (MQ=255) ccAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAgc > 8:403989/1‑149 (MQ=255) ccAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAgc > 7:246959/1‑149 (MQ=255) cAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAgcg < 1:298534/149‑1 (MQ=255) atctCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCGGGGGAgcgca < 5:255269/146‑2 (MQ=255) aGTTCTGCAACTTCCTTGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 2:130402/149‑2 (MQ=255) aGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 5:225210/149‑2 (MQ=255) aGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 2:135791/149‑2 (MQ=255) aGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGcc < 7:32856/149‑1 (MQ=255) cTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCAGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGc > 5:418979/1‑149 (MQ=255) tGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca > 6:255269/1‑143 (MQ=255) gCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCt > 6:136580/1‑148 (MQ=255) cAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGc < 7:403989/146‑1 (MQ=255) cAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGa < 5:136580/149‑1 (MQ=255) cAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGa < 8:247126/149‑1 (MQ=255) cAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGa < 8:195748/149‑1 (MQ=255) aCTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATa < 1:127504/149‑1 (MQ=255) aCTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATa < 1:132907/149‑1 (MQ=255) cTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGc < 5:46445/149‑1 (MQ=255) tgtgCCACGAGCTGCTGCAGCAGCAAGAGGACGACGGCACTTTCATGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCATACAGCAGAGCGCCATGAAGATAGTTGcc > 2:205516/4‑149 (MQ=255) tgCCACGAGCTGATGCAGCAGCAAGAGGACGCCTGCACTGTCCTGTACTGGATCCGCAAGAAAGCCTACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTTATAGTTGCcg < 8:19332/147‑1 (MQ=255) ggCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcga > 2:67116/1‑149 (MQ=255) gCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgac < 8:240565/149‑1 (MQ=255) ccACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgac > 2:266921/1‑148 (MQ=255) cACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgacga < 1:315696/149‑1 (MQ=255) cGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACgag > 7:220791/1‑148 (MQ=255) gAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACCGGAGAGCGCCATGCTGATAGTTGCCGCCGAGaa < 6:435039/149‑1 (MQ=255) gAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGaa < 6:440928/149‑1 (MQ=255) aGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCAGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAAc < 6:418979/149‑1 (MQ=255) gctgctGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACa < 6:241470/149‑1 (MQ=255) ctgcAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATccc > 5:315325/1‑149 (MQ=255) ctgcAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATcc < 1:56957/148‑1 (MQ=255) cagcagcaAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCgct > 5:441575/1‑149 (MQ=255) cagcaAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCgctgct < 7:364687/149‑1 (MQ=255) cagcaAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCgctgct < 4:406486/149‑1 (MQ=255) gagGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGTGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGc > 2:181529/1‑149 (MQ=255) gCCGGCCATTTCCTGTACTGGATCGGCAAGAAAGCCGACTGAATGGGTCTGGTCCACGGCGGGCGTTGCGCCTACAGTGCGCTCCCCAGACAGGAGAGGGCCATGCTGATAGTTGTCGACGTGAACATCACGCTGCTCGTTGCcttgtt < 8:307904/149‑1 (MQ=255) cGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATa > 8:195864/1‑109 (MQ=255) cGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATa < 7:195864/109‑1 (MQ=255) cGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCttcttc > 5:366063/1‑148 (MQ=255) cGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCttcttc > 8:244323/1‑148 (MQ=255) cGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGATCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACCTCCCGCTGCTCGATGCCttcttc > 8:280893/1‑148 (MQ=255) gCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAg < 4:403842/149‑1 (MQ=255) cACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAgg < 5:318835/149‑1 (MQ=255) aCTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAggg < 6:441575/149‑1 (MQ=255) tttCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGtt > 5:403079/1‑149 (MQ=255) tttCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGtt > 6:150484/1‑149 (MQ=255) tttCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGtt > 2:236917/1‑149 (MQ=255) cTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGTGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCg < 1:181529/148‑1 (MQ=255) tGTACTGGATACGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCACGCTCCTCGATGCCTTCTTCCAGGCTTTCGGt > 7:155040/1‑149 (MQ=255) tACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGt < 6:315325/147‑1 (MQ=255) tGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAAt > 7:18126/1‑149 (MQ=255) gATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGcc > 6:72534/1‑124 (MQ=255) gATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGcc < 5:72534/124‑1 (MQ=255) tCCTCAAGAAAGCCGACTTAATCGCTATGGAACACGCCCTGCGTTGAGCCTACACTGCGCTCCCTAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgc < 8:367188/149‑1 (MQ=255) ccGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgcc > 8:184653/1‑149 (MQ=255) gCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgccgc > 5:249096/1‑149 (MQ=255) gCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgccgc > 5:176641/1‑149 (MQ=255) gCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgccgc > 3:332697/1‑149 (MQ=255) gCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTc < 1:118377/144‑1 (MQ=255) gCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTc > 2:118377/1‑144 (MQ=255) cAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgccgc > 6:405116/1‑148 (MQ=255) aaaGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTAccc > 6:294978/1‑149 (MQ=255) aaaGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTAccc < 5:405116/149‑1 (MQ=255) aCTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGa < 4:199340/149‑1 (MQ=255) cTGAATCGGTCTGGATCACGCCCGGCGTTGCGCCTAAACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGaa < 8:155040/149‑1 (MQ=255) tGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAg > 4:54351/1‑149 (MQ=255) aaTCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGcc > 2:77613/1‑149 (MQ=255) cGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTc > 7:145506/1‑148 (MQ=255) gCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGa < 1:236917/149‑1 (MQ=255) gCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGa < 3:54351/149‑1 (MQ=255) gCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGa < 2:207307/149‑1 (MQ=255) tGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAtgct > 6:375723/1‑149 (MQ=255) acacGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCa < 8:18126/149‑1 (MQ=255) gCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGAt > 3:255020/1‑84 (MQ=255) gCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGAt < 4:255020/84‑1 (MQ=255) ccGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTc > 7:399864/1‑148 (MQ=255) cGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCTCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGa < 2:14599/149‑1 (MQ=255) gTTGCGACTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGAc > 8:349275/1‑149 (MQ=255) cgcCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGcc > 8:158928/1‑148 (MQ=255) cTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGata > 8:57197/1‑149 (MQ=255) acacTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATc > 3:146934/1‑149 (MQ=255) catggcgcTCTCCTGTCTGGGGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATcc > 7:241592/5‑149 (MQ=255) cacTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATATTTGCCGACTAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGatat < 1:67116/147‑1 (MQ=255) cacTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATcc < 8:145506/149‑1 (MQ=255) atggcgcTCTCCTGTCTGGGGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCct > 4:210425/4‑149 (MQ=255) acTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCct < 7:244323/149‑1 (MQ=255) tggcgcTCTCCTGTCTGGGGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCctg > 5:80125/3‑149 (MQ=255) cccAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCCTGCTGGTgcg > 8:280939/1‑149 (MQ=255) | CCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCCTGCTGGTGCG > NC_002947/2415159‑2415455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |