Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,796,619 G→C 6.7% intergenic (+52/‑121) PP_t42 → / → PP_t43 tRNA‑Val/tRNA‑Val

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,796,6190GC 6.7% 187.8 / 4.3 60intergenic (+52/‑121)PP_t42/PP_t43tRNA‑Val/tRNA‑Val
Reads supporting (aligned to +/- strand):  ref base G (28/28);  new base C (2/2);  total (30/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.16e-01

GAATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAG  >  NC_002947/2796473‑2796764
                                                                                                                                                  |                                                                                                                                                 
gAATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGcc                                                                                                                                                 >  6:65583/1‑149 (MQ=255)
  aTGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCcgc                                                                                                                                               <  6:188512/149‑1 (MQ=255)
      gcACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAGTTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCcgcgc                                                                                                                                             >  3:359557/1‑147 (MQ=255)
      gcACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCcgcgc                                                                                                                                             >  3:266313/1‑147 (MQ=255)
      gcACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCcgcgc                                                                                                                                             >  2:72078/1‑147 (MQ=255)
      gcACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGa                                                                                                                                           <  6:246538/149‑1 (MQ=255)
          cacaCGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTATTTCATTGTCCATTGCCGCGCGAGCgg                                                                                                                                       >  7:265792/1‑149 (MQ=255)
           acacGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCATTTGTGCCTACCAAATCGAAAAAGGGGTGATCCTAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCggg                                                                                                                                      <  4:359557/149‑1 (MQ=255)
                 cAGGCACATAGCTCAGGTGGTTAGATCACCACCTTTACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTCCCGCTCGCGCGGCAAtgga                                                                                                                                <  6:337318/149‑4 (MQ=18)
                   ggCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACcgc                                                                                                                              <  5:65583/149‑1 (MQ=255)
                   ggCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACcgc                                                                                                                              <  8:265792/149‑1 (MQ=255)
                    gCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACcgcg                                                                                                                             <  7:88986/149‑1 (MQ=255)
                    gCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACcgcg                                                                                                                             >  8:163257/1‑149 (MQ=255)
                    gCACATAGCTCAGTTGCGTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACcgcg                                                                                                                             <  4:62275/149‑1 (MQ=255)
                     cacaTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCgg                                                                                                                            <  7:163257/149‑1 (MQ=255)
                     cacaTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTCCCGCTCGCGCGGCAAtggacaat                                                                                                                            <  2:152735/149‑8 (MQ=18)
                        aTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCAt                                                                                                                         >  1:345934/1‑149 (MQ=255)
                                 ttGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCa                                                                                                                  >  6:442170/1‑147 (MQ=255)
                                 ttGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCa                                                                                                                  >  7:236797/1‑147 (MQ=255)
                                     ttAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAgcgc                                                                                                            <  1:72078/149‑1 (MQ=255)
                                         agCACCACCTTGACATGGTGGGGGTCGTTGGTACGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCttt                                                                                                         >  8:12289/1‑148 (MQ=255)
                                             ccaccTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTc                                                                                                    >  7:393660/1‑149 (MQ=255)
                                             ccaccTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTc                                                                                                    <  8:174322/149‑1 (MQ=255)
                                             ccaccTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTc                                                                                                    <  1:156570/149‑1 (MQ=255)
                                              caccTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCg                                                                                                   <  8:236797/149‑1 (MQ=255)
                                                ccTTGACATGGTGGTGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGaa                                                                                                 <  6:23816/149‑1 (MQ=255)
                                                 cTTGACATGGTGGGGGTGGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGAGGCAAAGCGCTTTCATTCGaaa                                                                                                <  6:366343/149‑1 (MQ=255)
                                                      cATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGtttt                                                                                           >  3:394582/1‑149 (MQ=255)
                                                       aTGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGttttt                                                                                          <  4:266313/149‑1 (MQ=255)
                                                                gTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTtct                                                                                 <  8:393660/149‑1 (MQ=255)
                                                                       gTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCaaaaaa                                                                          <  2:426744/149‑1 (MQ=255)
                                                                        ttCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTATCaaaa                                                                            >  3:121868/1‑146 (MQ=255)
                                                                           gAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGc                                                                      <  3:61832/149‑1 (MQ=255)
                                                                                      tgCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTAc                                                           >  6:44367/1‑149 (MQ=255)
                                                                                      tgCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTAc                                                           <  2:345934/149‑1 (MQ=255)
                                                                                        ccTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACg                                                          >  8:349842/1‑148 (MQ=255)
                                                                                         cTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCa                                                        <  8:118483/149‑1 (MQ=255)
                                                                                             cAAATCGAAAAAGGGGTGATCCGAAAGGGTCCCCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCgg                                                    >  5:232582/1‑149 (MQ=255)
                                                                                             cAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCgg                                                    <  5:379206/149‑1 (MQ=255)
                                                                                             cAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCgg                                                    <  5:372343/149‑1 (MQ=255)
                                                                                                     aaaaGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGCAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTa                                             >  2:81554/1‑148 (MQ=255)
                                                                                                       aaGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAata                                          <  1:257706/149‑1 (MQ=255)
                                                                                                            gTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAg                                                               <  6:300959/123‑1 (MQ=255)
                                                                                                            gTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGAGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAg                                                               >  5:300959/1‑123 (MQ=255)
                                                                                                                   gAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTTATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCacac                              <  5:442170/149‑1 (MQ=255)
                                                                                                                        ggTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAg                         >  3:361409/1‑149 (MQ=255)
                                                                                                                         gTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAgg                        >  6:202689/1‑149 (MQ=255)
                                                                                                                             ccccTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACGGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGcaca                    >  6:77885/1‑149 (MQ=255)
                                                                                                                             ccccTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGcaca                    <  7:12289/149‑1 (MQ=255)
                                                                                                                                cTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAg                 <  5:44367/149‑1 (MQ=255)
                                                                                                                                      tCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGt           >  6:147925/1‑149 (MQ=255)
                                                                                                                                        aTTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTg         >  1:133354/1‑149 (MQ=255)
                                                                                                                                         ttGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGGCGATAGATCAGTTgt        >  6:302698/1‑148 (MQ=255)
                                                                                                                                            tCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTa     <  7:349842/149‑1 (MQ=255)
                                                                                                                                             gtaTTCCCGCTCGCGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGt       >  8:391227/3‑146 (MQ=255)
                                                                                                                                             gtaTTCCCGCTCGCGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTag    >  6:277981/3‑149 (MQ=255)
                                                                                                                                             ccATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGACACTAATATGCGCAACACACGACAGTCACAAAGATAAGTTgtt       >  5:111693/1‑144 (MQ=255)
                                                                                                                                               aTTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCCCATAGCTCAGTTGGTTagag  >  6:168461/1‑149 (MQ=255)
                                                                                                                                               aTTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTagag  >  4:274564/1‑149 (MQ=255)
                                                                                                                                                ttGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGCGCTTTACAGGTACGCATCGGGCCACTAATATGCGCAGCACACGACAGGCACATAGCTCAGTTGGTTagag  >  5:338078/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
GAATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAG  >  NC_002947/2796473‑2796764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑