| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,229,981 | C→A | 5.7% | intergenic (+79/+49) | PP_2829 → / ← PP_2830 | GntR family transcriptional regulator/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,229,981 | 0 | C | A | 5.7% | 221.6 / 3.2 | 70 | intergenic (+79/+49) | PP_2829/PP_2830 | GntR family transcriptional regulator/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base C (36/30); new base A (2/2); total (38/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.77e-01 | |||||||||||
TTGGCGGTAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCGGGTGCTGCCGGT > NC_002947/3229834‑3230128 | ttGGCGGTAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAATCCTCAAGGCTCa > 4:48505/1‑149 (MQ=255) tGGCGGTAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCAt > 1:121150/1‑149 (MQ=255) gCGGTAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACATGTGAAATGACGGCCTGAAAACCTCAAGGCTCAtt < 6:234251/148‑1 (MQ=255) gCGGTAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTc > 7:214869/1‑149 (MQ=255) gTAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCgca < 5:417259/149‑1 (MQ=255) tAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCgcag < 7:404003/149‑1 (MQ=255) aGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCgc < 6:396348/145‑1 (MQ=255) aGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCgc > 5:396348/1‑145 (MQ=255) gCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGcac > 7:119513/1‑148 (MQ=255) cgcAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCa > 5:21171/1‑149 (MQ=255) gcTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAg > 8:57836/1‑149 (MQ=255) gcTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTAATTCGCAGCACGAAGAGCCACCTGCAg > 5:279772/1‑149 (MQ=255) gcTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTAATTCGCAGCACGAAGAGCCACCTGCAg > 5:273611/1‑149 (MQ=255) cTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAgg > 3:104279/1‑149 (MQ=255) aGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAggcgg < 2:111516/148‑1 (MQ=255) gcgcTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTa > 5:148797/1‑148 (MQ=255) cgcTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTaaa > 1:149435/1‑149 (MQ=255) cgcTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTaaa > 5:137410/1‑149 (MQ=255) cGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAg > 7:359969/1‑149 (MQ=255) gAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGa < 6:7583/143‑1 (MQ=255) gAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGa > 5:7583/1‑143 (MQ=255) gAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTtctc < 6:137110/149‑1 (MQ=255) acacCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTctcct > 7:71063/1‑148 (MQ=255) cTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGTGTTg < 2:149435/149‑1 (MQ=255) cacaAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGctc > 3:132922/1‑149 (MQ=255) cacaAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGctc > 5:369558/1‑149 (MQ=255) caAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCtt > 3:364162/1‑149 (MQ=255) gTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGcc > 4:21353/1‑149 (MQ=255) ttGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGccc < 5:401199/149‑1 (MQ=255) tGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGccc < 4:364162/148‑1 (MQ=255) aTCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGAc < 2:87182/149‑1 (MQ=255) aTCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGAc > 2:406420/1‑149 (MQ=255) tCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGACACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACg > 2:224467/1‑149 (MQ=255) aaGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCa < 8:71063/149‑1 (MQ=255) gCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACgg < 3:21353/149‑1 (MQ=255) ttGCAGGTGCTGCCAAGTGCTGCGAGAGGGGCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGc > 1:41693/1‑126 (MQ=255) ttGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACATGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACgg < 2:42341/147‑1 (MQ=255) ttGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGc < 2:41693/126‑1 (MQ=255) ttGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACggg > 4:66584/1‑148 (MQ=255) gCAGGTGCTGCCAAGTGCGGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCTCAAAGAGCCACCTGCAGGCGGCGTATATTGAGTTCTCCTCAGGGTTGCTCTTGCCGCTGACGCAAACGGGTa < 8:177915/148‑1 (MQ=255) aGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACt > 4:176300/1‑148 (MQ=255) gTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGAc < 8:359969/149‑1 (MQ=255) gTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGAc < 8:119513/149‑1 (MQ=255) gcCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAgcg > 7:41317/1‑149 (MQ=255) gcCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAgcg > 7:363668/1‑149 (MQ=255) gcCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGGAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAgcg > 7:357866/1‑149 (MQ=255) ccAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAgcgc < 3:66584/149‑1 (MQ=255) cAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTAATTCGCAGCACGAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGcgcc < 6:279772/149‑1 (MQ=255) cAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTAATTCGCAGCACGAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGcgcc < 6:273611/149‑1 (MQ=255) aGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGcgccgc < 3:116157/149‑1 (MQ=255) gctgcGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTtc > 2:249931/1‑95 (MQ=255) gctgcGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTtc < 1:249931/95‑1 (MQ=255) tgcGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATa > 1:93773/1‑149 (MQ=255) gcGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGcaca < 5:123543/146‑1 (MQ=255) gcGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGcaca > 6:123543/1‑146 (MQ=255) cGAGAGGGCCGACAGGTGAATTGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATa < 5:416940/147‑1 (MQ=255) cGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATAc < 2:369952/148‑1 (MQ=255) gagaGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATAc > 1:386361/1‑147 (MQ=255) gCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAAcg > 1:182136/1‑149 (MQ=255) cGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAAcgcg < 6:137410/149‑1 (MQ=255) aaTGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATc < 8:41317/148‑1 (MQ=255) gAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTg > 4:22042/1‑149 (MQ=255) aaaaCCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGc < 1:406420/149‑1 (MQ=255) aaaaCCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGAACCACAACCCGTTGc > 7:168723/1‑149 (MQ=255) aaCCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCgg < 2:93773/149‑1 (MQ=255) aaCCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCgg < 3:48505/149‑1 (MQ=255) cTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCGGGtg > 5:81340/1‑149 (MQ=255) tCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCGGGtgc > 6:352973/1‑149 (MQ=255) gCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCGGGTGCTGCCg < 2:386361/149‑1 (MQ=255) tCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCGGGTGCTGCCggt > 4:343701/1‑149 (MQ=255) | TTGGCGGTAAGGCGACTGGCGCAGGCGCTTGAGGTGCGCTGCGGGCGAAACACCCGCTTCACAAGTTGAAATCAAGACGCTTGCAGGTGCTGCCAAGTGCTGCGAGAGGGCCGACAGGTGAAATGACGGCCTGAAAACCTCAAGGCTCATTCGCAGCACAAAGAGCCACCTGCAGGCGGCGTAAATTGAGTTCTCCTCAGGGTTGCTCTTGCCCCTGACGCAAACGGGTACTGACCAGCGCCGCACATACCAGCAACGCGGCAATGATCCACAACCCGTTGCGGGTGCTGCCGGT > NC_002947/3229834‑3230128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |