Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,466,057 A→T 6.6% noncoding (103/119 nt) PP_mr39 ← P15 ncRNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,466,0570AT 6.6% 224.3 / 4.4 76noncoding (103/119 nt)PP_mr39P15 ncRNA
Reads supporting (aligned to +/- strand):  ref base A (41/30);  new base T (2/3);  total (43/33)
Fisher's exact test for biased strand distribution p-value = 6.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.85e-01

GAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGCACAGGGCGCAG  >  NC_002947/3465913‑3466203
                                                                                                                                                  |                                                                                                                                                    
gAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAGTCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGaa                                                                                                                                                      <  3:342848/145‑1 (MQ=255)
gAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAGTCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGaa                                                                                                                                                      >  4:342848/1‑145 (MQ=255)
 aGGCGGTAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGa                                                                                                                                                 >  2:55370/1‑149 (MQ=255)
     ggcAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGCTTCCCGACCgg                                                                                                                                             <  1:420687/149‑1 (MQ=255)
     ggcAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGCTTCCCGACCgg                                                                                                                                             <  1:427261/149‑1 (MQ=255)
           cTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGttt                                                                                                                                       <  2:186322/149‑1 (MQ=255)
            tGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGCAGGAGAAAAAAAAAACCCCCGGTCGGTAAGCCGACCGGGGGtt                                                                                                                                        >  1:364209/1‑149 (MQ=255)
            tGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGCTTCCCGACCGGGGGttt                                                                                                                                       >  5:192526/1‑148 (MQ=255)
             ggCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCgggg                                                                                                                                           <  1:193953/143‑1 (MQ=255)
             ggCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCgggg                                                                                                                                           >  2:193953/1‑143 (MQ=255)
              gCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGa                                                                                                                                     <  8:184868/148‑1 (MQ=255)
              gCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGCTTCCCGACCGGGGGttt                                                                                                                                       <  6:192526/146‑1 (MQ=255)
               cccGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAg                                                                                                                                    >  2:309562/1‑148 (MQ=255)
                ccGAACGGGATTGTCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTa                                                                                                                                  <  4:370313/149‑1 (MQ=255)
                ccGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGTAAGCCGACCGGGGGTTTGAGTa                                                                                                                                  >  8:234560/1‑149 (MQ=255)
                 cGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTAt                                                                                                                                 >  2:305999/1‑149 (MQ=255)
                    aCGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATtct                                                                                                                              <  8:89416/149‑1 (MQ=255)
                        gATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATg                                                                                                                          >  2:11900/1‑149 (MQ=255)
                             gCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcgg                                                                                                                     <  6:311526/149‑1 (MQ=255)
                              cTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcggc                                                                                                                    >  4:308455/1‑149 (MQ=255)
                              cTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAACGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcggc                                                                                                                    >  3:9326/1‑149 (MQ=255)
                               tAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcggcg                                                                                                                   >  6:395012/1‑149 (MQ=255)
                                aaaTCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcggcgg                                                                                                                  >  5:263610/1‑149 (MQ=255)
                                   tCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGccc                                                                                                               <  5:124295/149‑1 (MQ=255)
                                   tCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAAACCACGGTCGGGAAGCCGACCGGGGGTTTGACTATTCTCATGTTCGGCGGccc                                                                                                               >  8:85270/1‑149 (MQ=255)
                                     gCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCt                                                                                                             <  4:147012/149‑1 (MQ=255)
                                       cAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTc                                                                                                           >  7:116251/1‑148 (MQ=255)
                                           cGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAgg                                                                                                      <  5:395012/149‑1 (MQ=255)
                                             tAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTg                                                                                                    <  6:285687/149‑1 (MQ=255)
                                                gtgtTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGCCCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGAc                                                                                                 >  6:72748/1‑149 (MQ=255)
                                                  gtTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGc                                                                                               <  3:308455/149‑1 (MQ=255)
                                                        gtagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcgg                                                                                                                     >  4:129274/1‑122 (MQ=255)
                                                        gtagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcgg                                                                                                                     >  4:342356/1‑122 (MQ=255)
                                                        gtagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcgg                                                                                                                     <  3:342356/122‑1 (MQ=255)
                                                        gtagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTcgg                                                                                                                     <  3:129274/122‑1 (MQ=255)
                                                        gtagtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGCCGGGAAGCAGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgggtg                                                                                        >  8:227790/1‑149 (MQ=255)
                                                         tagtaATACGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgggtgg                                                                                       <  7:379340/149‑1 (MQ=255)
                                                           gtaATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCgggtggg                                                                                      >  7:73221/1‑148 (MQ=255)
                                                              ataaGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTAt                                                                                   <  6:263610/148‑1 (MQ=255)
                                                               taaGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCg                                                                                 >  3:66465/1‑149 (MQ=255)
                                                                 aGTGGCGTAGTTCATGAATCTGTCGTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACGGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGgc                                                                               <  1:55370/149‑1 (MQ=255)
                                                                     gCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGt                                                                                                     <  1:376014/124‑1 (MQ=255)
                                                                     gCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGt                                                                                                     >  2:376014/1‑124 (MQ=255)
                                                                       gTATTTCATTAATCTGTCCTCAAACTGAATCGGTGTTGCTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCTCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAg                                                                         <  2:196479/149‑1 (MQ=255)
                                                                       gTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAg                                                                         >  8:118825/1‑149 (MQ=255)
                                                                                gAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAAc                                                                >  8:218058/1‑149 (MQ=255)
                                                                                     tGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTa                                                                          >  3:223238/1‑134 (MQ=255)
                                                                                     tGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTa                                                                          <  4:223238/134‑1 (MQ=255)
                                                                                       tCCTCAAAGTTAATCGGTGTTGGTCAAAGGC‑‑CAGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGTCGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAacac                                                          <  6:35493/148‑1 (MQ=255)
                                                                                       tCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCaa                                                             <  8:116251/145‑1 (MQ=255)
                                                                                       tCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAAt                                                            <  1:305999/146‑1 (MQ=255)
                                                                                         cTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATAccc                                                        >  3:154105/1‑148 (MQ=255)
                                                                                          tCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCa                                                       >  5:247856/1‑148 (MQ=255)
                                                                                             aaGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAg                                                    >  2:5328/1‑148 (MQ=255)
                                                                                             aaGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGt                                                   >  2:42570/1‑149 (MQ=255)
                                                                                                  aaTCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGTGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATa                                               <  1:309562/149‑1 (MQ=255)
                                                                                                   aTCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGc                                             >  7:103982/1‑149 (MQ=255)
                                                                                                      ggTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTgg                                          <  2:364209/149‑1 (MQ=255)
                                                                                                       gtgtTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGc                                         <  7:234560/149‑1 (MQ=255)
                                                                                                          ttGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGACGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAgg                                      >  1:48603/1‑149 (MQ=255)
                                                                                                            ggTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGt                                     <  7:118825/148‑1 (MQ=255)
                                                                                                             gTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAAc                                                                <  8:365435/120‑1 (MQ=255)
                                                                                                             gTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAAc                                                                >  7:365435/1‑120 (MQ=255)
                                                                                                             gTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGTTGc                                   >  2:268847/1‑149 (MQ=255)
                                                                                                              tCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGc                                   >  3:63966/1‑148 (MQ=255)
                                                                                                               cAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCa                                 >  4:84386/1‑149 (MQ=255)
                                                                                                                aaaGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCAc                                >  6:412765/1‑149 (MQ=255)
                                                                                                                aaaGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCAc                                >  1:296037/1‑149 (MQ=255)
                                                                                                                  aGGC‑‑CTGAAAAACAAAACCCCCGGCCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCCGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGc                              <  7:227790/149‑1 (MQ=255)
                                                                                                                    gC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAg                            >  6:94852/1‑149 (MQ=255)
                                                                                                                    gC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAg                            >  6:183290/1‑149 (MQ=255)
                                                                                                                          gAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGAGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCgg                        >  6:416240/1‑149 (MQ=255)
                                                                                                                                   aacCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCa               <  7:218058/149‑1 (MQ=255)
                                                                                                                                    acCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAg              >  3:195164/1‑149 (MQ=255)
                                                                                                                                       cccGGTCGGCTTCCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTACGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGca            >  1:331948/1‑149 (MQ=255)
                                                                                                                                           gTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGc                                   >  2:252072/1‑121 (MQ=255)
                                                                                                                                           gTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGc                                   <  1:252072/121‑1 (MQ=255)
                                                                                                                                                gAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGCACAGGGCGCAg  >  7:107047/1‑149 (MQ=255)
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GAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGCGTAGTTCATGAATCTGTCCTCAAAGTGAATCGGTGTTGGTCAAAGGC‑‑CTGAAAAACAAAACCCCCGGTCGGGAAGCCGACCGGGGGTTTGAGTATTCTCATGTTCGGCGGCCCCTCGAAGGTGGACGCCGGGTGGGTATCGGCGCCTAGTGGCTAAACCAATACCCAAAGTAATAGCTGGCAGGTGCCACGCAGCCGGCAACGGCCAGCACAGGGCGCAG  >  NC_002947/3465913‑3466203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: