| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,722,903 | G→C | 6.1% | D54H (GAC→CAC) | PP_3288 → | universal stress protein family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,722,903 | 0 | G | C | 6.1% | 315.2 / 7.4 | 98 | D54H (GAC→CAC) | PP_3288 | universal stress protein family protein |
| Reads supporting (aligned to +/- strand): ref base G (46/46); new base C (2/4); total (48/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01 | |||||||||||
AAAGACTGCTGCTGATCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTGCAGCAGCCCTTGAATGAGATCCTGAT > NC_002947/3722757‑3723048 | aaaGACTGCTGCTGATCGCCTCCCCCCTGATGCGCCGAACCCCGTTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAATGGCTTTCCACGGCGGGCCTGGTGAATGAc < 6:220703/149‑1 (MQ=255)aaaGACTGCTGCTGATCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGAc < 3:387785/149‑1 (MQ=255) ctgctgctgATCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTCATTCACCAGgc < 1:356868/149‑1 (MQ=255) ctgctgATCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCt < 7:188549/149‑1 (MQ=255) ctgctgATCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTCATTCACCAGgcc < 6:306802/147‑2 (MQ=255) ctgATCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTg‑g > 3:318708/1‑148 (MQ=255) aTCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCa < 3:127918/147‑1 (MQ=255) tCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTc < 1:236576/149‑1 (MQ=255) cGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTCATTCACCAGgccc < 2:368285/140‑3 (MQ=255) cGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTCATTCACCAGgccc > 1:368285/1‑138 (MQ=255) gCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCa < 3:366707/148‑1 (MQ=255) tCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATgcg > 7:137752/1‑149 (MQ=255) ccccTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAATGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGa < 4:309877/149‑1 (MQ=255) ccccTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATgcgc > 3:427274/1‑147 (MQ=255) ccccTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATgcgc > 2:113419/1‑147 (MQ=255) ccTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAgg < 7:162422/149‑1 (MQ=255) ccTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAgg > 7:288589/1‑149 (MQ=255) aTGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTa > 2:246803/1‑149 (MQ=255) gcCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCAt < 6:300283/133‑1 (MQ=255) gcCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCAt > 5:300283/1‑133 (MQ=255) gcCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTg > 4:155904/1‑149 (MQ=255) gcCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTg < 8:288589/149‑1 (MQ=255) gAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTGCGCAGTCATGCGCGAGGGTTACGTgca < 1:5324/149‑1 (MQ=255) cagcccGGTCATAGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTgcag > 1:219321/4‑148 (MQ=255) aaCCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGgc < 6:93755/117‑1 (MQ=255) aaCCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGgc > 5:93755/1‑117 (MQ=255) agcccGGTCATAGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTgcag > 3:324977/3‑147 (MQ=255) gcccGGTCATAGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTgaagcag > 8:219466/2‑149 (MQ=255) cccGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTgcagcag > 7:360375/1‑148 (MQ=255) tCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTCATTCACCAGgcc > 6:430412/1‑109 (MQ=255) tCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTCATTCACCAGgcc < 5:430412/110‑2 (MQ=255) cTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGt < 8:395897/148‑1 (MQ=255) tATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTg > 7:327611/1‑148 (MQ=255) gACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAAt < 2:219321/148‑1 (MQ=255) gACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATg > 7:90281/1‑149 (MQ=255) gACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGACTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATg > 3:54110/1‑149 (MQ=255) aCCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTgcagca > 3:127365/1‑136 (MQ=255) aCCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTgcagca < 4:127365/136‑1 (MQ=255) ccGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGc < 4:318708/149‑1 (MQ=255) cGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCt < 1:113566/149‑1 (MQ=255) cGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCt > 2:113566/1‑149 (MQ=255) cGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACGACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCGCCGTGAATGGCt > 8:67267/1‑149 (MQ=255) tgctgcGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTg > 7:282930/1‑100 (MQ=255) tgctgcGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTg < 8:282930/100‑1 (MQ=255) cgcTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCa < 7:110883/148‑1 (MQ=255) cgcTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAg > 5:241968/1‑149 (MQ=255) cgcTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAg > 1:9033/1‑149 (MQ=255) cgcTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAg > 1:221523/1‑149 (MQ=255) cttGGCCTTGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAgg > 4:337682/3‑149 (MQ=255) ccaaggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTg > 4:145439/1‑149 (MQ=255) caaggccaaggGCATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGc < 2:9033/149‑1 (MQ=255) caaggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAgg < 6:85391/104‑1 (MQ=255) caaggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAgg > 5:85391/1‑104 (MQ=255) caaggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGc < 2:4843/149‑1 (MQ=255) caaggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGc < 4:427274/149‑1 (MQ=255) aaggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTAGGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGcc > 5:372792/1‑149 (MQ=255) aaggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGcc < 8:137752/149‑1 (MQ=255) ggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTTCCACGGCTGGCCTGGTGAATGACCAGGCGCTG‑TCAGTCATGCGCGTGGGTTACGTGCATCAGCACCGTGAATTGCTTG‑AAACCCAGGCGTTGccta < 4:410867/149‑3 (MQ=255) ggccaaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCATGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGa < 7:344910/149‑1 (MQ=255) caaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATgc > 3:29322/1‑149 (MQ=255) aaggGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATgcg > 7:107983/1‑149 (MQ=255) gggAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATgcggc < 8:53088/149‑1 (MQ=255) ggAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATgcggcg < 3:155904/149‑1 (MQ=255) ggAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGACACGGAGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACAGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATgcggcg > 8:201699/1‑149 (MQ=255) gAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATgcggcg > 2:239348/1‑148 (MQ=255) gcgcTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCTGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATg < 3:229876/148‑1 (MQ=255) gcgcTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATgg > 2:178942/1‑149 (MQ=255) cgcTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑aa > 3:271518/1‑119 (MQ=255) cgcTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑aa < 4:271518/119‑1 (MQ=255) cgcTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGgt < 3:337682/149‑1 (MQ=255) cacaTCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCAc > 8:134130/1‑149 (MQ=255) acaTCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCaac > 5:357296/1‑147 (MQ=255) acaTCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCAcc < 3:75200/149‑1 (MQ=255) cgtcgCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTca > 1:69281/1‑149 (MQ=255) gtcgCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTca > 6:87035/1‑148 (MQ=255) gtcgCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTca < 2:221523/148‑1 (MQ=255) cgCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACaa < 8:360375/149‑1 (MQ=255) gCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACaa < 6:241968/148‑1 (MQ=255) cTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAgg < 2:333886/72‑1 (MQ=255) cTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAgg > 1:333886/1‑72 (MQ=255) ttCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAAcc > 2:52213/1‑147 (MQ=255) cTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGGTAAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAggtg < 1:113419/149‑1 (MQ=255) cGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGgtgt < 8:327611/149‑1 (MQ=255) cGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGCGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGgtgt < 1:354871/149‑1 (MQ=255) tGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTgg < 2:263616/149‑1 (MQ=255) tgAATGGCTTGCCTCGTCGGGCCTGGGTAATGACCAGGCGCTG‑GATGTCATGCGCGATGGTGACGTGCAGCAGCACCGTGATTGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGgtgt < 4:324977/145‑1 (MQ=255) ggAAGGGCTTGCCACGGTGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTggg > 1:261176/1‑149 (MQ=255) ggAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTggg > 7:39854/1‑149 (MQ=255) ggAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTggg > 3:115478/1‑149 (MQ=255) gAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAg > 7:377441/1‑138 (MQ=255) gAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAg < 8:377441/138‑1 (MQ=255) gAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTggg < 3:145439/148‑1 (MQ=255) aGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTg > 8:123130/1‑148 (MQ=255) cggcggGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTGCAGCAGCCCtt > 3:411659/1‑148 (MQ=255) gCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTGCAGCAGCCCTTGAATgag < 4:115478/149‑1 (MQ=255) ccTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTGCAGCAGCCCTTGAATgaga < 4:54110/149‑1 (MQ=255) gTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTGCAGCAGCCCTTGAATGAGATCCt > 7:323416/1‑149 (MQ=255) aaTGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTGCAGCAGCCCTTGAATGAGATCCTGAt < 6:372792/149‑1 (MQ=255) | AAAGACTGCTGCTGATCGCCTCCCCCCTGATGCGCCGAACCCCGGTCTATGACCGGGCTGCTGCGCTGGCCAAGGCCAAGGGAATGGCGCTGCACATCGTCGCTTTCGACTACGTGGAAGGGCTTGCCACGGCGGGCCTGGTGAATGACCAGGCGCTG‑GCAGTCATGCGCGAGGGTTACGTGCAGCAGCACCGTGAATGGCTGG‑AAACCCAGGCGTTGCCGATGCGGCGCAATGGTGTCACCGTCACAACCGAGGTGGTGTGGGTGCAGCAGCCCTTGAATGAGATCCTGAT > NC_002947/3722757‑3723048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |