Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,797,506	A→T	8.4%	L163Q (CTG→CAG)	vdh ←	vanillin dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,797,506	0	A	T	8.4%	199.7 / 5.2	71	L163Q (CTG→CAG)	vdh	vanillin dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (34/31);  new base T (3/3);  total (37/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGATGGCGGGGGCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCGGTGATCTGCGTGGTCA  >  NC_002947/3797360‑3797653                                                                                                                                                   |                                                                                                                                                    cgaTGGCGGGGGCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGc                                                                                                                                                   <  2:72581/149‑1 (MQ=255)  gaTGGCGGGGGCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCTGCg                                                                                                                                                  >  5:393769/1‑149 (MQ=255)    tGGCGGGGGCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCgg                                                                                                                                                 <  4:263201/148‑1 (MQ=255)      gCGGGGGCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCTGGCCTGCGGCaa                                                                                                                                              <  6:393769/149‑2 (MQ=255)       cGGGGGCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTTGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCTGGCCTGCGGCaa                                                                                                                                              <  4:260036/148‑2 (MQ=255)        gggggCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCTGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCatgg                                                                                                                                            <  1:380305/149‑1 (MQ=255)            gCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCatggcaat                                                                                                                                        <  2:77910/149‑1 (MQ=255)                  tGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCatggcaatgg                                                                                                                                      <  6:75784/145‑1 (MQ=255)                  tGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCatggcaatgg                                                                                                                                      >  5:75784/1‑145 (MQ=255)                    cggcgCATTGCTGAGGACAATGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGAGCAGCCGCTGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGCTGCCGCAGGCCAGCGGCATGGCAATGGCAcgc                                                                                                                                 <  5:342128/148‑1 (MQ=255)                    ccgcgcATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCAcgc                                                                                                                                 <  5:348003/146‑1 (MQ=255)                      gcgcATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTg                                                                                                                              >  5:68509/1‑149 (MQ=255)                          aTTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGc                                                                                                                            >  6:415944/1‑147 (MQ=255)                                  tgaCATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCAcc                                                                                                                  >  3:273187/1‑149 (MQ=255)                                       ttGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGc                                                                                                             <  2:188174/149‑1 (MQ=255)                                       ttGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCGTCAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCCTGGCCAGTATCACCGGGGc                                                                                                             >  5:75372/1‑149 (MQ=255)                                          aCCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGtt                                                                                                          <  5:415944/149‑1 (MQ=255)                                             aCGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCa                                                                                                       <  8:50707/149‑1 (MQ=255)                                               gCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACg                                                                                                     <  7:20957/149‑1 (MQ=255)                                                  gTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTg                                                                                                  <  6:68509/149‑1 (MQ=255)                                                  gTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTg                                                                                                  >  1:313287/1‑149 (MQ=255)                                                  gTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAACCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTg                                                                                                  <  3:39768/149‑1 (MQ=255)                                                      ccGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGAt                                                                                              <  5:358405/149‑1 (MQ=255)                                                          tGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGccc                                                                                          <  4:178487/149‑1 (MQ=255)                                                             cTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAac                                                                                       >  4:60692/1‑149 (MQ=255)                                                              tGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAaca                                                                                      >  7:219559/1‑149 (MQ=255)                                                                     tGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCAcgcc                                                                               >  3:259892/1‑149 (MQ=255)                                                                        agcaCCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCa                                                                            <  5:95205/149‑1 (MQ=255)                                                                          caCCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAgg                                                                          <  6:121390/149‑1 (MQ=255)                                                                           aCCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAggg                                                                         <  4:272525/149‑1 (MQ=255)                                                                                 ccGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGgcgcgcg                                                                   >  3:374672/1‑149 (MQ=255)                                                                                  cGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGgcgcgcg                                                                   >  7:222235/1‑148 (MQ=255)                                                                                  cGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGgcgcgcg                                                                   >  6:255537/1‑148 (MQ=255)                                                                                    aTCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCAGCAGGGCGCGCGCAg                                                                >  6:147638/1‑149 (MQ=255)                                                                                       aGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACCCCACGCCGCAGGGCGCGCGCAGGGc                                                             >  6:77845/1‑149 (MQ=255)                                                                                         ccGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCa                                                           >  7:57447/1‑149 (MQ=255)                                                                                               gACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAAGGGCCCGCGGGCCCGGAAAAACCGGGGCATACCCCGGGCCGATGCCCCCCCCCCCCCCGCCCGGCGCCCGCACGGCCAtgccga                                                     >  8:151394/1‑144 (MQ=255)                                                                                                  cgccgGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGc                                                  >  3:259354/1‑149 (MQ=255)                                                                                                  cgccgGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGc                                                  >  8:174624/1‑149 (MQ=255)                                                                                                          tCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCggg                                           >  2:198481/1‑148 (MQ=255)                                                                                                           cAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGaa                                         >  3:119084/1‑149 (MQ=255)                                                                                                              cTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGt                                      >  4:113729/1‑149 (MQ=255)                                                                                                                 cGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAg                                                                >  2:204281/1‑120 (MQ=255)                                                                                                                 cGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAg                                                                <  1:204281/120‑1 (MQ=255)                                                                                                                 cGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTcc                                    >  2:327447/1‑148 (MQ=255)                                                                                                                   aGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCg                                                                                                <  8:280258/86‑1 (MQ=255)                                                                                                                   aGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCg                                                                                                >  7:280258/1‑86 (MQ=255)                                                                                                                   aGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAg                                 <  5:417933/149‑1 (MQ=255)                                                                                                                    ggCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAgg                                <  3:113729/149‑1 (MQ=255)                                                                                                                     gCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAggg                               <  8:219559/149‑1 (MQ=255)                                                                                                                     gCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAggg                               <  8:57447/149‑1 (MQ=255)                                                                                                                       cTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGa                             >  5:118345/1‑149 (MQ=255)                                                                                                                        ttGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGAt                            >  4:426240/1‑149 (MQ=255)                                                                                                                          gAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGAt                            <  4:119084/147‑1 (MQ=255)                                                                                                                             caccacGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACtt                       >  5:32671/1‑149 (MQ=255)                                                                                                                               ccacGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCa                     >  7:316309/1‑149 (MQ=255)                                                                                                                                cacGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCAc                    >  2:130175/1‑149 (MQ=255)                                                                                                                                cacGGTGCTGCCGCAGTCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCAc                    <  6:75372/149‑1 (MQ=255)                                                                                                                                  cGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCg                  <  8:222235/149‑1 (MQ=255)                                                                                                                                  cGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCg                  <  4:273187/149‑1 (MQ=255)                                                                                                                                      catGCCGCTGGCCTGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGgcgcgc                                                                    >  7:111224/3‑95 (MQ=255)                                                                                                                                      catGCCGCTGGCCTGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGgcgcgc                                                                    <  8:111224/93‑1 (MQ=255)                                                                                                                                       atGCCGCTGGCCTGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCGGTGAt             >  1:289604/2‑149 (MQ=255)                                                                                                                                          ccGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAggg                               <  7:52524/128‑1 (MQ=255)                                                                                                                                          ccGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCGGTGATCt           <  6:32671/148‑1 (MQ=255)                                                                                                                                          ccGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCGGTGATCTg          >  5:89995/1‑149 (MQ=255)                                                                                                                                          acGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAggg                               >  8:52524/2‑128 (MQ=255)                                                                                                                                            gCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCa                     >  2:51266/1‑136 (MQ=255)                                                                                                                                            gCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCa                     <  1:51266/136‑1 (MQ=255)                                                                                                                                                 ccAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCGGTGATCTGCGTGGt    >  4:70142/1‑148 (MQ=255)                                                                                                                                                  cAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGTAACGTCCGAGGGGATCACTTCACCGGTGATCTGCGTGGTCa  >  2:314886/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CGATGGCGGGGGCATCCTGCGGCGCATTGCTGATGACATTGACCACGCCGTCGCCGATGCCTGCATCGTGCAGCACCTGGCCGATCAGCCGATGGACCGCCGGGCTCAGCTCCGAGGCCTTGAGCACCACGGTGTTGCCGCAGGCCAGCGGCATGGCAATGGCACGCGTGGCCAGTATCACCGGGGCGTTCCACGGTGCGATGCCCAACACCACGCCGCAGGGCGCGCGCAGGGCCATTGCGAAGCTGCCGGGAACGTCCGAGGGGATCACTTCACCGGTGATCTGCGTGGTCA  >  NC_002947/3797360‑3797653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑