| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 292,606 | C→G | 5.1% | intergenic (+22/‑38) | ssuA → / → ssuD | aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 292,606 | 0 | C | G | 5.1% | 254.7 / 4.0 | 79 | intergenic (+22/‑38) | ssuA/ssuD | aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase |
| Reads supporting (aligned to +/- strand): ref base C (36/38); new base G (2/2); total (39/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.71e-01 | |||||||||||
CCCAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGATCG > NC_002947/292458‑292749 | cccAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACAACTTCCAGGCGATCAAGCTGATACCCAAGCCGATGAGCATCAAGGACGTGATCTGGAAACACCCTGCCAAAGTCG‑ATAGCGCGACTTGATTGACTGCCAGTGCCGGGgcgc > 8:59387/1‑149 (MQ=255) ccAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCACGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGcgcc < 1:8001/149‑1 (MQ=255) cAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGcgccg > 3:221806/1‑149 (MQ=255) ggtggtGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGcccc < 7:139233/149‑1 (MQ=255) gtggtgGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCg < 5:63505/149‑1 (MQ=255) tggtggCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGGCGCCCCgg < 3:349959/149‑1 (MQ=255) gtggCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGc > 2:61134/1‑148 (MQ=255) gtggCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCt < 4:221806/149‑1 (MQ=255) ggCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTag < 7:393006/149‑1 (MQ=255) gCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCGAGGACGTGATCGGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTaga < 5:99280/149‑1 (MQ=255) gCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGGCGCCCCGGcactg < 7:171531/149‑5 (MQ=255) gCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTaga < 3:427954/149‑1 (MQ=255) gCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTaga < 3:332467/149‑1 (MQ=255) ccGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGCACACCCCCTGCCAAAGTCGCCTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTaga < 1:102406/149‑1 (MQ=255) aaCAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCAccc > 1:111448/1‑149 (MQ=255) cAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCtt > 4:204968/1‑149 (MQ=255) gaagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCtt > 1:377657/1‑147 (MQ=255) gaagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTga < 7:168259/149‑1 (MQ=255) aagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCtt > 7:7979/1‑146 (MQ=255) aagaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTga < 8:7979/148‑1 (MQ=255) agaTCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTgagg < 4:95706/149‑1 (MQ=255) tCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGgaga > 4:62562/1‑149 (MQ=255) tCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACACTTGAGgaga > 7:384416/1‑149 (MQ=255) gCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAgac < 5:398858/148‑1 (MQ=255) ccGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTgagga > 8:143938/1‑144 (MQ=255) ccGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTgagga < 7:143938/144‑1 (MQ=255) ccGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTgag < 8:76548/142‑1 (MQ=255) ccGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTgag > 7:76548/1‑142 (MQ=255) ccTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCaa > 8:229557/1‑149 (MQ=255) cTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAAt < 2:227863/149‑1 (MQ=255) cTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAAt < 4:98504/149‑1 (MQ=255) ttCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCAAGTGCCGGGGCGCAGCCCCGGCTAGAGCCACCCTTGAGGAGACGCATCAAATg > 6:302372/1‑149 (MQ=255) cAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGc < 1:307133/149‑1 (MQ=255) gcTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTaa > 4:205396/1‑149 (MQ=255) cTGATACCCAAGCCGCTGAGCATCAAGTACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCACCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTc < 5:302372/149‑1 (MQ=255) tGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTaa < 5:102596/141‑1 (MQ=255) tGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTaa > 6:102596/1‑141 (MQ=255) tACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGCGCCACCCTGGAGGAGCCGACTCCAATGAGCCGTAACATTTTCTGGt > 4:120396/1‑149 (MQ=255) ccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTtcc < 3:62562/149‑1 (MQ=255) ccAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGAATGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCATGAGGAGCCGACTCGAAAGAGCCTTAACATTTTCTGGTtc > 6:348419/1‑148 (MQ=255) aacccGCTGAGCATCAAGGACGTTATCTGGACACCCCCTGCCAAAGGCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTATAGCCACCCTTCAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTtcctc < 2:377657/146‑1 (MQ=255) gCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCcccac > 6:296020/1‑149 (MQ=255) cTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTAGATTGACTGCCAGTGCCGGGGCCCCGCCCCCGCTAGAGCCACCCATCAGGAGACTACTCCAATGAGCCTTAAAAAATTCTGGTTACTAcccacc > 5:294715/1‑149 (MQ=255) cATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACgg > 6:367724/1‑149 (MQ=255) aTCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGt < 4:203086/149‑1 (MQ=255) aTCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGt > 3:162521/1‑149 (MQ=255) tCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGt > 5:80349/1‑148 (MQ=255) aaGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGAc > 8:282432/1‑149 (MQ=255) aGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACg < 3:205396/149‑1 (MQ=255) gACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGc < 7:200345/149‑1 (MQ=255) gACGTCATCTGCACACCCCCTGCCAACGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCGTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGc < 4:78190/149‑1 (MQ=255) aCGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGGCCCCCTTGAGGAGACGCCTCCAATGAGGCTTAACATTTTCTGGTTCGTGCCCAGCAACGGTGACGGct > 8:411570/1‑148 (MQ=255) cGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCaa < 5:367724/149‑1 (MQ=255) cTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCt > 8:288532/1‑149 (MQ=255) gACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCt < 6:80349/146‑1 (MQ=255) acacCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTggg < 7:282432/148‑1 (MQ=255) acacCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTggg > 4:326126/1‑148 (MQ=255) acCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCAc < 6:135379/149‑1 (MQ=255) ccccTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACtt > 2:58771/1‑149 (MQ=255) cccTGCCAAAGGCG‑CTTGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTc < 5:348419/149‑1 (MQ=255) tGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCg > 6:71944/1‑148 (MQ=255) ccAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAg < 1:61134/149‑1 (MQ=255) aaGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCTTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGgcg > 6:408411/1‑149 (MQ=255) gcgcCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGCCGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTc > 8:62366/1‑149 (MQ=255) gcCTTGATTGACTGCCCGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGa < 2:320187/149‑1 (MQ=255) cTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGAc > 3:179798/1‑148 (MQ=255) attgaCTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACg < 7:229557/148‑1 (MQ=255) aCTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTc > 1:80384/1‑137 (MQ=255) aCTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTc < 2:80384/137‑1 (MQ=255) cTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCATGTGCGGTCGACCACGGTTAcc < 1:58771/149‑1 (MQ=255) tGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCt > 6:283569/1‑149 (MQ=255) ccAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgc < 7:288532/149‑1 (MQ=255) cAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTg > 7:308921/1‑147 (MQ=255) aGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgcag < 4:162521/149‑1 (MQ=255) aGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgcag > 5:375807/1‑149 (MQ=255) tagCCGGGGCGGCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgcag > 8:286638/3‑148 (MQ=255) gTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTAGAGGAGACGACTCCAATGAGCCTTAACAGTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTCCCTGGGCACTACCGAAGGCGCACGTGCGGTCGCCCACGGTTACCTgcag > 7:146524/1‑148 (MQ=255) agCCGGGGCGGCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgcag > 2:16329/2‑147 (MQ=255) ccGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTgg < 1:69287/101‑1 (MQ=255) ccGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTgg > 2:69287/1‑101 (MQ=255) cGGAGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTgcag > 5:114882/1‑144 (MQ=255) gggCGACGCACCGGCAAGAGCAACCCTTCAGCAGACGAAACCAATCAGCCTTAACATTTTATGGTTCCTCCCCACCCACGGTGAAGACAAGTACCTGGGCACTACCGAAGGAGCACGTCCGCTCGACAACGGTAACCTGCAGCAGATcg > 4:310954/1‑149 (MQ=255) | CCCAGAGGTGGTGGCCGCGCAACAGAAGATCGCCGACACCTTCCAGGCGCTCAAGCTGATACCCAAGCCGCTGAGCATCAAGGACGTGATCTGGACACCCCCTGCCAAAGTCG‑CTAGCGCGCCTTGATTGACTGCCAGTGCCGGGGCGCCGCCCCGGCTAGAGCCACCCTTGAGGAGACGACTCCAATGAGCCTTAACATTTTCTGGTTCCTCCCCACCCACGGTGACGGCAAGTACCTGGGCACTTCCGAAGGCGCACGTGCGGTCGACCACGGTTACCTGCAGCAGATCG > NC_002947/292458‑292749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |