| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,051,047 | C→G | 5.1% | F360L (TTC→TTG) | oprB‑III → | carbohydrate‑selective porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,051,047 | 0 | C | G | 5.1% | 257.4 / 3.4 | 79 | F360L (TTC→TTG) | oprB‑III | carbohydrate‑selective porin |
| Reads supporting (aligned to +/- strand): ref base C (34/41); new base G (2/2); total (36/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.59e-01 | |||||||||||
CGCTTCGCCGTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGAC > NC_002947/4050903‑4051194 | cGCTTCGCCGTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAAcg > 6:6423/1‑149 (MQ=255) cGCCGTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCgg < 6:152935/147‑1 (MQ=255) cGCCGTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCgg < 4:96252/147‑1 (MQ=255) gCCGTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGc < 7:15798/148‑1 (MQ=255) ccGTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCca < 3:385184/149‑1 (MQ=255) gTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCcag > 5:72045/1‑148 (MQ=255) gTTCACCAAGTGGTATGGAGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGCGCcag > 7:239807/1‑148 (MQ=255) aCCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGGCCCCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑GAACGCggcatcttc < 1:348088/148‑8 (MQ=255) aCCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGtt > 4:409122/1‑149 (MQ=255) ccAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGTCGCGTT‑CAACGCGGGCCAGCAGTTc > 1:107128/1‑149 (MQ=255) ccAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTc > 8:368456/1‑149 (MQ=255) cAAGTGGTATGGCGCCGGCGTGGTGCTCTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCTTGGCACTGGGTTACGG‑‑CCGCACAGAACCCAACCAGCGTACCCTCGATGTGCTGCAAGATGCCGCGTG‑CAACGACGTCCAGCAtttac > 4:324847/1‑147 (MQ=255) aGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCg < 2:257627/149‑1 (MQ=255) aGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCg < 5:6423/149‑1 (MQ=255) gTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCTATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACa < 6:418585/149‑1 (MQ=255) tGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACACAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATc > 7:276943/1‑148 (MQ=255) ggCGCCGGCGTGGAGCTGGACCAGCCGGTCGACGGCCGCCGGCACGCTACCGTTGCACGGGGGGACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGAGGTGCGGGAAGAAGGCGCGTT‑CCACGCGGGCCAGCAGTTCCCGGAGATCGa < 8:207903/149‑1 (MQ=255) gtgcCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAAc < 7:188408/120‑1 (MQ=255) gtgcCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAAc > 8:188408/3‑122 (MQ=255) gcgcCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGa > 4:419971/1‑148 (MQ=255) gcCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAg < 3:75139/149‑1 (MQ=255) ccGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAgc > 2:321342/1‑149 (MQ=255) cGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAgcg < 6:296778/149‑1 (MQ=255) cGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAgcg < 3:409122/149‑1 (MQ=255) ggtgCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGaa > 8:64531/1‑148 (MQ=255) cggTACAAGCCGTTCGAAGGCCGCGAGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGGGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGTGCCGAACAGt < 8:239807/146‑1 (MQ=255) cTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGtt > 3:81772/1‑149 (MQ=255) cTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGtt > 8:227763/1‑149 (MQ=255) cTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGt < 7:396156/148‑1 (MQ=255) cAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATc < 3:172878/148‑1 (MQ=255) cAAGCAGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCg < 3:324847/149‑1 (MQ=255) aGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGaa < 3:419971/149‑1 (MQ=255) gCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGaa > 5:121206/1‑148 (MQ=255) cGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTTCCCACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACt < 1:331529/149‑1 (MQ=255) gTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCg > 5:125887/1‑143 (MQ=255) gTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCg < 6:125887/143‑1 (MQ=255) ttCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAAc > 7:72104/1‑133 (MQ=255) ttCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAAc < 8:72104/133‑1 (MQ=255) cGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGc > 7:116097/1‑148 (MQ=255) cGAAGGCCGCCCGAAGGATACCGTGGCACTGAGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGc > 1:265092/1‑148 (MQ=255) ggCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACgg < 8:68790/149‑1 (MQ=255) cgccCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTa < 1:321342/149‑1 (MQ=255) ccGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTAc > 2:429300/1‑147 (MQ=255) ccGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCa < 4:101736/149‑1 (MQ=255) aaGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGc < 8:276943/149‑1 (MQ=255) tGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGTCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATgg < 2:107128/149‑1 (MQ=255) tGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATgg < 6:443256/149‑1 (MQ=255) tGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATgg < 2:265092/149‑1 (MQ=255) ttACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTgc < 6:72045/149‑1 (MQ=255) cGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTgcgc < 4:81772/148‑1 (MQ=255) cGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGcc > 3:380016/1‑149 (MQ=255) cGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATCGCTGAACCTGCGcc < 7:368456/149‑1 (MQ=255) ccGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCCGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCgg < 7:227763/149‑1 (MQ=255) cgcgCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGa > 5:291109/1‑149 (MQ=255) gcgcCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGAc < 1:429300/149‑1 (MQ=255) cGTACCCAACCCTCTTATCCGCGATGTGCTGTAAGATTCCGCGTT‑CAAGGCGGTCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACATGCGCCCGGACGTGc < 2:318547/149‑1 (MQ=255) cccAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATa > 1:21290/1‑149 (MQ=255) ccaaaCACGCGAAGCCGCGAAGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACAACGACAGCACCGAAAACTTGATCCAACTCAGCTACGCCTACCAGGCCACGCCAAGGCAGAACCTCCGCACGGAGGTGCAATa > 8:118634/4‑149 (MQ=255) ccAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACGAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATAc < 6:121206/149‑1 (MQ=255) ccAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATa > 5:444756/1‑148 (MQ=255) ccAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATa > 4:94699/1‑148 (MQ=255) ccGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATAcatcat > 8:381319/1‑149 (MQ=255) gcgTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGt < 7:124155/135‑1 (MQ=255) gcgTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGt > 8:124155/1‑135 (MQ=255) gcgTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACatcatc > 5:390727/1‑148 (MQ=255) tgtgCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTTCGCCCGGACGTGCAATACATCATCg < 2:289759/137‑1 (MQ=255) tgtgCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTACGCCCGGACGTGCAATACATCATCg > 1:289759/1‑137 (MQ=255) cTGGAAGATGCCGCGTT‑CTACGCGGGCCAGCTGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGATCTGAGCTACGGCTACCAGGCCACGCCTTGGCTGAAGCTGCTCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTtctc < 7:118634/149‑1 (MQ=255) gAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCgg < 7:33139/148‑1 (MQ=255) gAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCg < 8:38708/147‑1 (MQ=255) tggcccGCGTT‑GAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGa < 4:120394/124‑1 (MQ=255) tggcccGCGTT‑GAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGa > 3:120394/5‑128 (MQ=255) aTGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGc > 4:26156/1‑136 (MQ=255) aTGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGc < 3:26156/136‑1 (MQ=255) gCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGa > 7:375708/1‑149 (MQ=255) ccGCGTT‑GAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGa > 6:295161/1‑148 (MQ=255) gcgTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACAt > 6:347637/1‑149 (MQ=255) gTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACatcatc < 4:396246/118‑1 (MQ=255) gTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACatcatc > 3:396246/1‑118 (MQ=255) cAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGAc > 2:23761/1‑148 (MQ=255) | CGCTTCGCCGTTCACCAAGTGGTATGGCGCCGGCGTGGTGCTGTACAAGCCGTTCGAAGGCCGCCCGAAGGATACCGTGGCACTGGGTTACGG‑‑CCGCGCCGTACCCAACCCGCGTAGCCGCGATGTGCTGGAAGATGCCGCGTT‑CAACGCGGGCCAGCAGTTCCCGGACATCGACAGCGCCGAACAGTTGATCGAACTGAGCTACGGCTACCAGGCCACGCCATGGCTGAACCTGCGCCCGGACGTGCAATACATCATCGAGCCAGGGGCGTTCTCGGGCAAAGACATCGAC > NC_002947/4050903‑4051194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |