| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 298,119 | G→T | 5.3% | intergenic (‑116/+38) | gshA ← / ← PP_0244 | glutamate‑‑cysteine ligase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 298,119 | 0 | G | T | 5.3% | 309.1 / 5.0 | 94 | intergenic (‑116/+38) | gshA/PP_0244 | glutamate‑‑cysteine ligase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (40/49); new base T (2/3); total (42/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01 | |||||||||||
CAGGCTCAGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGC > NC_002947/297971‑298266 | cagacaaaggaggCGGATGAGGAGTTAGCTCAAGATCTATTCCTTCACGCGTCAGTCGCCCCAATATCGGGGTAGAGATAACGGTCTACAAGGGTATGAAGAAAGGAACTGGCGTTGTCGCCAGGTTTACGCGGTTCCAGCAGTGCCAg > 6:424746/8‑149 (MQ=255) ggCTCAGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAgcg < 4:207303/149‑1 (MQ=255) gcggcgGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCGCTGGCActgct < 8:289163/149‑1 (MQ=255) ggTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGaaaa > 5:317816/1‑149 (MQ=255) gTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCGTCGTTTACGCGGTTCCAGCACTGCCAGCGCACTGCTGaaaa > 6:24522/1‑148 (MQ=255) gTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCGCTGGCACTGCTGgaacc < 1:31836/149‑3 (MQ=255) gaggagTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATAc < 6:71895/148‑1 (MQ=255) gTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCg > 7:402535/1‑145 (MQ=255) gTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGa < 6:403143/149‑1 (MQ=255) cGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATa < 5:133289/148‑1 (MQ=255) gCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATAc < 1:380346/148‑1 (MQ=255) ccgaaaGATGTATTCCTTCACGCGGCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTATACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATAc < 3:269538/144‑1 (MQ=255) tCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGc > 2:6892/1‑149 (MQ=255) aGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGTGTAGAGATAACGGTCTACAATGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTg < 5:46704/149‑1 (MQ=255) aGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTg > 5:626/1‑149 (MQ=255) aTGTATTCCTTCACGCGTCAGTCGCCGCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGTAGAAAGGAACTGTCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGt < 1:169535/149‑1 (MQ=255) tGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTg < 6:317816/149‑1 (MQ=255) gTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGt > 6:200331/1‑147 (MQ=255) ttCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGc < 3:221521/148‑1 (MQ=255) cTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCGCTGGCActgct < 3:136002/116‑1 (MQ=255) cTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCGCTGGCActgct > 4:136002/1‑116 (MQ=255) cTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTag < 6:626/148‑1 (MQ=255) cTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTa > 8:233322/1‑147 (MQ=255) aCGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAAc > 2:409606/1‑149 (MQ=255) tCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGa < 2:179526/149‑1 (MQ=255) aGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGaa < 8:231639/148‑1 (MQ=255) aGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAg > 7:237125/1‑149 (MQ=255) gTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTCCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAgg > 4:312156/1‑149 (MQ=255) gCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGtt < 3:34948/148‑1 (MQ=255) gCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTCCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTc < 3:312156/149‑1 (MQ=255) ccccAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTg < 2:180553/123‑1 (MQ=255) ccccAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTg > 1:180553/1‑123 (MQ=255) ccccAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTcc > 3:227501/1‑149 (MQ=255) ccAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCtt > 3:84658/1‑149 (MQ=255) ccAATATGGGGGTAGAGATAACGCTCTACAAGGGTAGGAAGAATGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCAGTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCtt < 5:24522/149‑1 (MQ=255) cAATATGGGGTTAGAGATAACGGGCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTg < 2:261841/149‑1 (MQ=255) ggggTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCttt < 5:105952/148‑1 (MQ=255) gggTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTgg > 7:328765/1‑149 (MQ=255) gagaTAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGccac < 8:402535/148‑1 (MQ=255) gagaTAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGccac < 1:6892/148‑1 (MQ=255) gaTAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAg > 7:207691/1‑149 (MQ=255) aTAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGc < 4:161397/149‑1 (MQ=255) gTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCtt > 1:161769/1‑126 (MQ=255) gTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCtt < 2:161769/126‑1 (MQ=255) cAAGGGTAGGTAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGccc < 7:202221/147‑1 (MQ=255) cAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGccc < 8:237125/147‑1 (MQ=255) cAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGcc < 4:84658/146‑1 (MQ=255) cAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGcc < 2:49380/146‑1 (MQ=255) ggTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAAc > 7:258598/1‑148 (MQ=255) tAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTg < 5:350235/83‑1 (MQ=255) tAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTg > 6:350235/1‑83 (MQ=255) tAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTAc < 7:254866/149‑1 (MQ=255) aGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACg > 5:108467/1‑149 (MQ=255) aGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACg > 6:203964/1‑149 (MQ=255) gaagaaAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTc > 8:395463/1‑149 (MQ=255) gaagaaAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTc > 2:257162/1‑149 (MQ=255) aagaaAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCg > 6:406792/1‑149 (MQ=255) aagaaAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCg > 6:400403/1‑149 (MQ=255) aaGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCt < 7:26066/134‑1 (MQ=255) aaGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCt > 8:26066/1‑134 (MQ=255) aGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTc < 4:227501/149‑1 (MQ=255) ggAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTc > 7:284063/1‑148 (MQ=255) ggAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCg < 5:400403/149‑1 (MQ=255) ggAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCg < 5:406792/149‑1 (MQ=255) tGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGaccac > 3:404392/1‑149 (MQ=255) tGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGaccac > 3:238779/1‑149 (MQ=255) gCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGaccac > 3:334473/1‑147 (MQ=255) gTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGTCACCAGCTTGTCGc < 4:409359/120‑1 (MQ=255) gTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGTCACCAGCTTGTCGc > 3:409359/1‑120 (MQ=255) gTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAgg < 8:328765/149‑1 (MQ=255) gCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTgcgc < 1:409606/149‑1 (MQ=255) ccTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTc < 8:329195/126‑1 (MQ=255) ccTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTc > 7:329195/1‑126 (MQ=255) cTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGcgccg > 8:314953/1‑149 (MQ=255) gTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGcgccgc < 7:233322/147‑1 (MQ=255) tttACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCg > 1:8326/1‑149 (MQ=255) cgctGTTCCAGCAGTGCCAGCGCACTTCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGt < 5:424746/149‑1 (MQ=255) gcgGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTg < 8:207691/149‑1 (MQ=255) cgGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgc < 4:404392/149‑1 (MQ=255) ggTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgca < 6:270895/149‑1 (MQ=255) tcagcagTGCGCTGGCACTGCTGGAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgcagca > 1:54280/2‑148 (MQ=255) ccAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgcag < 1:437811/146‑1 (MQ=255) cagcagTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGcaca > 5:11819/1‑149 (MQ=255) gcagTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCacac > 7:387794/1‑148 (MQ=255) tGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCg > 7:188677/1‑149 (MQ=255) tGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCg < 4:334473/149‑1 (MQ=255) gCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCgg > 5:407462/1‑149 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt < 7:314953/149‑1 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt < 8:258598/149‑1 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt < 4:238779/149‑1 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt > 6:140212/1‑149 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt < 6:108467/149‑1 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt > 8:378529/1‑149 (MQ=255) ccAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGt > 1:123714/1‑149 (MQ=255) cAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTg < 6:407462/149‑1 (MQ=255) aGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGc < 2:8326/149‑1 (MQ=255) | CAGGCTCAGGCGGCGGTTGAGGAGTTCGCTCAAGATGTATTCCTTCACGCGTCAGTCGCCCCAATATGGGGGTAGAGATAACGGTCTACAAGGGTAGGAAGAAAGGAACTGGCGTTGTCGCCTGGTTTACGCGGTTCCAGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGC > NC_002947/297971‑298266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |