| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,423,090 | G→C | 9.2% | intergenic (‑143/‑23) | PP_5645 ← / → PP_3914 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,423,090 | 0 | G | C | 9.2% | 217.8 / 12.9 | 76 | intergenic (‑143/‑23) | PP_5645/PP_3914 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (37/30); new base C (2/5); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.08e-01 | |||||||||||
ACAGCCCTCCTGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAACTCGTGGTCGGCTCCACCGT > NC_002947/4422948‑4423231 | aCAGCCCTCCTGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATgg < 3:159690/149‑1 (MQ=255) aGCCCTCCTGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATggcg > 4:391215/1‑149 (MQ=255) cctcctGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATggcggc > 7:55120/1‑148 (MQ=255) ctcctGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCCATATcgcggcag < 8:35332/149‑3 (MQ=255) ctcctGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCCATATcgcggcag < 4:275750/149‑3 (MQ=255) ctGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAgg < 2:294164/149‑1 (MQ=255) ctGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCCATATcgcggcagt < 7:101091/147‑4 (MQ=255) ctGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATCGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCaa < 8:359394/147‑1 (MQ=255) tGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGa > 8:81728/1‑149 (MQ=255) gCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGAt > 3:50370/1‑149 (MQ=255) aaCCGACTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTc > 6:361020/1‑149 (MQ=255) tGTTGGATGCCTGTAAAAAAATAGCAAAAGGACGTCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCaag > 8:96542/1‑146 (MQ=255) tGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATc < 3:391215/149‑1 (MQ=255) gCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCa > 3:289529/1‑149 (MQ=255) cTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTACAATTATTAGGGACTCTCACTAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGAAGCTATATGGCGGCCAAGGATTCCCCATGTCTGAATAACg > 7:213387/1‑149 (MQ=255) tAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGTCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCct > 8:156203/1‑149 (MQ=255) tAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCct > 1:95293/1‑149 (MQ=255) aaaaaaTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGCCTCTCCCGAATAATGGCCGGACTTGTTGTAAACCCGCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACCCctgc > 7:363651/1‑149 (MQ=39) aaaaaTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCctgct > 8:234228/1‑149 (MQ=255) aaaaaTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCctgct > 3:165152/1‑149 (MQ=255) aaTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCctg < 4:187986/144‑1 (MQ=255) aaTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCctg > 3:187986/1‑144 (MQ=255) aaTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCAAGTCTGAATCACGCCTGCTGAc > 6:150540/1‑149 (MQ=255) aTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGAcc < 2:95293/149‑1 (MQ=255) aTAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGAcc > 2:68944/1‑149 (MQ=255) ccAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGc > 3:284240/1‑148 (MQ=255) cAAATGACATCATCATTAAAGTACCTCAAATTATTAGTGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCga < 7:357036/149‑1 (MQ=38) cAAAGGCCATGATGATTCAAGTCCCGTCAATTATTATGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCTGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCga < 6:215878/149‑1 (MQ=38) aaGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCgaga < 5:361020/149‑1 (MQ=255) ccATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTg < 5:83087/149‑1 (MQ=255) cATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTgg < 6:230529/149‑1 (MQ=255) cATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCCATATcgcggcagt < 4:424576/104‑4 (MQ=255) cATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCCATATcgcggcagt > 3:424576/1‑101 (MQ=255) aTCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGt < 4:284240/149‑1 (MQ=255) cATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTc < 8:100750/149‑1 (MQ=255) ttCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGTCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTcga < 7:156203/149‑1 (MQ=255) tCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTcgac > 6:395993/1‑149 (MQ=255) aaGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTcgacga > 6:205066/1‑149 (MQ=255) aaGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCAGGTCTGAATCCCTCCTGCTGACCGGCGAGCCCTGGTCTGTcgacga > 8:400691/1‑149 (MQ=255) aaGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCATCTCACCTCTATTCACTGACGCGATATTGCGGCAAAGGATTCCCCATGTCTGAATCACGCCTTCTGACCGTCGAGACATTGTATGTcgacga > 8:71764/1‑149 (MQ=255) gTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTcgacgac > 2:263203/1‑148 (MQ=255) cccTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCCATATcgcggcag < 4:201120/88‑3 (MQ=255) cccTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCCATATcgcggcag > 3:201120/1‑86 (MQ=255) ccTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGaa > 6:337578/1‑148 (MQ=255) cTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAAc > 5:99960/1‑149 (MQ=255) cAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAAcc < 8:55120/147‑1 (MQ=255) attattAGTGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCGTGCTGACCGGCGAGACCTTGTCTGTCGACGACGAAACCTTcc < 7:96542/149‑1 (MQ=255) gggACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTga < 5:337578/149‑1 (MQ=255) tcCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCACTGTGAGAGcc > 1:405205/1‑147 (MQ=255) ccGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGACACCTTCCGCAGTGAGAGCCTAgg > 8:239846/1‑149 (MQ=255) ccGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAgg > 8:83283/1‑149 (MQ=255) ccGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAgg > 4:417929/1‑149 (MQ=255) cGAATATTTGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCTATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCGGCTGTGAGAGCCTAGGc < 8:213387/149‑1 (MQ=255) gAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTc < 8:124925/70‑1 (MQ=255) gAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGc > 3:93249/1‑148 (MQ=255) gAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGACGCGATATGGCGGCCAAGGATTc > 7:124925/1‑70 (MQ=255) atatTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGa < 4:50370/148‑1 (MQ=255) atatTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGa < 4:289529/148‑1 (MQ=255) tatTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGt < 5:115514/149‑1 (MQ=255) ttGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTg < 1:263203/149‑1 (MQ=255) ccGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTc > 2:215492/1‑148 (MQ=255) ggACTTGTTGTAACCCCTCTCCCCTATATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGAt < 5:101252/149‑1 (MQ=255) gACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATg < 7:71764/149‑1 (MQ=255) cTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGAc < 7:81728/149‑1 (MQ=255) gttgtAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGAcc < 1:68944/147‑1 (MQ=255) cccctctcccctctATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAAc > 4:67179/1‑149 (MQ=255) cctctcccctctATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCGTGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGt < 2:212257/126‑1 (MQ=255) cctctcccctctATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCGTGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGt > 1:212257/1‑126 (MQ=255) ccctctATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAACTCGTg < 5:205066/146‑1 (MQ=255) ccctctATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGAACTCGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAACTCGTGGTc > 6:403170/1‑149 (MQ=255) cagcttttCACTGCCGCGATATGGCGTCCAAGGATTCCCCATGTCTGAATCACGCCTGCGTACCGGCGAGACCTGGTCTGGCTACGACGAAACCTTCCGCGGTGAGAGCCTAGGCGATTTGCTCGATGACCACGAAGAACTCGTGGTCg < 8:363651/143‑1 (MQ=255) ctctATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAACTCGTGGTCgg > 2:223243/1‑149 (MQ=255) aTTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGCAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGACCTCGTGGTCGGCTc > 3:158191/1‑148 (MQ=255) ttCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGATCGATGACCACTAAGAACTCGAGGTAGGCTCCa > 8:114494/1‑149 (MQ=255) aCTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAACTCGTGGTCGGCTCCACCg > 6:400956/1‑149 (MQ=255) cTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTCGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAACTCGTGGTCGGCTCCACCGt < 7:400691/149‑1 (MQ=255) | ACAGCCCTCCTGCAACCGTCTGTTGGATGCCTGTAAAAAAATAGCCAAAGGCCATCAGCATTCAAGTCCCTCCAATTATTAGGGACTCTCCCGAATATTGGCCGGACTTGTTGTAACCCCTCTCCCCTCTATTCACTGCCGCGATATGGCGGCCAAGGATTCCCCATGTCTGAATCACGCCTGCTGACCGGCGAGACCTGGTCTGTCGACGACGAAACCTTCCGCTGTGAGAGCCTAGGCGAGTTGCTCGATGACCACGAAGAACTCGTGGTCGGCTCCACCGT > NC_002947/4422948‑4423231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |