| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 334,836 | T→G | 7.4% | intergenic (‑151/+137) | PP_0276 ← / ← PP_t73 | Cro/CI family transcriptional regulator/tRNA‑Thr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 334,836 | 0 | T | G | 7.4% | 240.2 / 8.9 | 81 | intergenic (‑151/+137) | PP_0276/PP_t73 | Cro/CI family transcriptional regulator/tRNA‑Thr |
| Reads supporting (aligned to +/- strand): ref base T (36/39); new base G (2/4); total (38/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.52e-01 | |||||||||||
GCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTATGGTGCCG > NC_002947/334688‑334980 | gCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGgctgct > 8:205771/1‑149 (MQ=255) tGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCtgctgc < 3:398459/148‑1 (MQ=255) tCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGc > 2:148678/1‑149 (MQ=255) tCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGc > 8:177517/1‑149 (MQ=255) ggCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTgcg < 5:361235/143‑1 (MQ=255) ggCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTgcg < 5:355273/143‑1 (MQ=255) ggCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTgcg > 6:355273/1‑143 (MQ=255) ggCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTgcg > 6:361235/1‑143 (MQ=255) ggCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCGCAGCAGccc < 2:156692/149‑1 (MQ=255) gCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCa > 8:130061/1‑149 (MQ=255) gCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCGCAGCAGcccc < 8:101971/149‑2 (MQ=255) cAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAACGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCGCAGCAGcccca < 8:84449/149‑3 (MQ=255) aGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATc > 1:395972/1‑149 (MQ=255) gAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGTGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCg < 1:23958/149‑1 (MQ=255) aaaTATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGctgctg < 8:2421/136‑1 (MQ=255) aaaTATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGctgctg > 7:2421/1‑136 (MQ=255) aaaTATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGc < 1:260457/149‑1 (MQ=255) aaTATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCa < 5:219524/149‑1 (MQ=255) aaTATCTAAAATTTGAGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGc < 8:285522/148‑1 (MQ=255) atatCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAg < 3:244090/149‑1 (MQ=255) atatCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGGCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAg < 4:256004/149‑1 (MQ=255) tCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGc > 8:367160/1‑148 (MQ=255) tAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAg > 4:153470/1‑149 (MQ=255) aaaTTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCaa < 2:349462/146‑1 (MQ=255) tttGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGc > 5:338625/1‑149 (MQ=255) tGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCt < 6:309440/148‑1 (MQ=255) gCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTcc > 1:172426/1‑149 (MQ=255) gCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTc < 1:209076/148‑1 (MQ=255) gATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCGCAGCAGcccca > 6:185778/1‑127 (MQ=255) gATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCGCAGCAGcccca < 5:185778/129‑3 (MQ=255) aTAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTac < 5:173554/149‑1 (MQ=255) tAAATCGTAGTGTGGATTGGTGGGCGTGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GGGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTaca < 5:216518/149‑1 (MQ=255) tCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGa > 2:63649/1‑149 (MQ=255) tCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGa > 4:122735/1‑149 (MQ=255) gTAGTGTGGATTGGTTGGCGAGTCACAGCGGTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATc < 8:162228/149‑1 (MQ=255) gTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGAt < 3:148162/148‑1 (MQ=255) gtgtGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCgtg < 3:153470/149‑1 (MQ=255) gtgtGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCgt < 7:367160/148‑1 (MQ=255) tgtgGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCgtgg < 7:205771/149‑1 (MQ=255) tgGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCgtggt < 5:16861/148‑1 (MQ=255) tgGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCgtggt < 2:395972/148‑1 (MQ=255) aTTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCaa < 2:272619/121‑1 (MQ=255) aTTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCaa > 1:272619/1‑121 (MQ=255) aTTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCt > 4:266828/1‑131 (MQ=255) aTTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCt < 3:266828/131‑1 (MQ=255) aTTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGAt > 7:12554/1‑149 (MQ=255) tggttggCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGAtt > 2:225067/1‑148 (MQ=255) ttggCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCgtgg < 4:408360/139‑1 (MQ=255) ttggCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAgg < 7:177517/149‑1 (MQ=255) ttggCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCAATCGCAGGCAAGCCAGCTCCTACACCGATCgtgg > 3:408360/1‑139 (MQ=255) ggCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTATGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAggg > 7:225647/1‑148 (MQ=255) gCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGc < 6:338625/148‑1 (MQ=255) cGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCAt < 3:374582/149‑1 (MQ=255) gAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACAACGATCGTGGTGGATTCAGGGCATc > 3:362254/1‑149 (MQ=255) tCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCAt > 8:320865/1‑145 (MQ=255) tCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCAt < 7:320865/145‑1 (MQ=255) aaaGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGt > 7:58866/1‑147 (MQ=255) aaGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAg > 5:160757/1‑149 (MQ=255) aGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGTG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCATGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCGGTaatg > 1:79374/1‑147 (MQ=255) tttGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAgg < 2:21676/149‑1 (MQ=255) gtgtTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATCAAGAGAATTGCTTCTGATTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGAAAGCCAGATCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGa > 1:85017/1‑149 (MQ=255) gtgtTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGa < 3:122735/148‑1 (MQ=255) ggAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAgg > 2:423275/1‑149 (MQ=255) ggAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAg < 3:261895/148‑1 (MQ=255) gtCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCggg < 8:225647/148‑1 (MQ=255) gTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGGAGTGTTTGGGGCTGCTGCGCAGCCAATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCgggggg > 1:89595/1‑148 (MQ=255) ttGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAAc < 7:130061/148‑1 (MQ=255) tGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCCAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCa > 2:185000/1‑149 (MQ=255) tGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCa > 3:292679/1‑149 (MQ=255) gTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCAcc > 1:68976/1‑149 (MQ=255) aTC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCttt < 1:423275/149‑1 (MQ=255) tC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGTAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTc < 1:148678/149‑1 (MQ=255) agagAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGAGTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCgg > 6:322429/1‑149 (MQ=255) agaATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTg > 7:189244/1‑149 (MQ=255) aaTTGCTTCTGCTTGGT‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAg < 2:85017/149‑1 (MQ=255) ttGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGAtt < 7:334911/103‑1 (MQ=255) ttGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGAtt > 8:334911/1‑103 (MQ=255) cTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCTGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCttt > 1:140583/1‑149 (MQ=255) ttCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCtttt > 7:411628/1‑149 (MQ=255) ttCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCtttt > 1:19027/1‑149 (MQ=255) ctgcgatgggCTGCGCAGCAGCCCCTCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCg > 1:277607/8‑149 (MQ=255) ggtTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTa < 8:58866/149‑1 (MQ=255) gtTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTAt > 3:211280/1‑149 (MQ=255) gggCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTATGGt < 2:19027/148‑1 (MQ=255) ggCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGCCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTATGGTGc < 1:63649/149‑1 (MQ=255) gctgctGCGCAGCCCATCGCAGGCTAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTATGGTGcc < 4:292679/149‑1 (MQ=255) ctgctgCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTATGGTGCCg > 6:115635/1‑149 (MQ=255) | GCTTGCCTCGGCAGAAATATCTAAAATTTGCGATAAATCGTAGTGTGGATTGGTTGGCGAGTCAAAGCGTTTGTGTTGGAGAGTGTGTCTGTTTTTGAGCTGTGCTGGTGATC‑AGAGAATTGCTTCTGCTTGGG‑GTGGTTGGGGCTGCTGCGCAGCCCATCGCAGGCAAGCCAGCTCCTACACCGATCGTGGTGGATTCAGGGCATCCGTAAGGCAGGGATTGAGGGCTGCGGGGGGAAAACAAAAAAGGCCCACCTTTCGGTGAGCCTTTTTTGATACTGCGTATGGTGCCG > NC_002947/334688‑334980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |