| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,479,825 | C→T | 8.1% | P392P (CCC→CCT) | ybdR → | Zn‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,479,825 | 0 | C | T | 8.1% | 210.6 / 5.9 | 74 | P392P (CCC→CCT) | ybdR | Zn‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (32/36); new base T (2/4); total (34/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.01e-01 | |||||||||||
CTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGT > NC_002947/4479679‑4479972 | ctgGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCgg > 4:338984/1‑149 (MQ=255) gAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCACCTGGCa < 2:416490/148‑1 (MQ=255) acaTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTg < 2:406350/149‑1 (MQ=255) acaTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTg > 6:289265/1‑149 (MQ=255) caTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCGCCCGGCACCTTgg > 2:413229/1‑149 (MQ=255) caTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTgg < 1:419414/149‑1 (MQ=255) aTCGAAGCAGGGCGCCTGCAACCGGAACTGTTCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCCGCACCTTggg > 1:259253/1‑149 (MQ=255) aTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCACCTGGCAcgagg < 5:234528/147‑5 (MQ=255) aTCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCGGGTGCAGCACCTGGCAcgagg > 6:234528/1‑143 (MQ=255) gAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGccc > 1:194875/1‑149 (MQ=255) aaGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCt > 3:167078/1‑149 (MQ=255) aaGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCt < 5:149792/149‑1 (MQ=255) aGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTg > 3:21106/1‑149 (MQ=255) ggCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCCGCATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGaccac < 1:260423/149‑1 (MQ=255) ggCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGcccac > 4:292907/1‑149 (MQ=255) cTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTggg > 3:266839/1‑134 (MQ=255) cTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTggg < 4:266839/134‑1 (MQ=255) aCCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTagag > 6:222941/1‑147 (MQ=255) aCCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAgagga < 6:177766/149‑1 (MQ=255) ccGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAgaggag < 5:149461/149‑1 (MQ=255) ccGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAgaggag > 7:176567/1‑149 (MQ=255) cGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGaggagg < 5:222941/149‑1 (MQ=255) tCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑aa < 1:433850/142‑1 (MQ=255) tCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑aa > 2:433850/1‑142 (MQ=255) gTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGa < 3:338984/149‑1 (MQ=255) ttACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGaa > 5:9417/1‑149 (MQ=255) ttACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGaa < 1:30258/149‑1 (MQ=255) aCTCACCGCTTAGCCCTAGCAGACGCGGCCAGTGGCTACAAAATGTTCGCTCAAAACCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCGTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAAc < 8:317550/148‑1 (MQ=255) aCTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAAc < 5:177721/148‑1 (MQ=255) cTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACg < 3:13551/148‑1 (MQ=255) tCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACgg > 4:103706/1‑148 (MQ=255) cGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGaa > 4:343676/1‑141 (MQ=255) cGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGaa < 3:343676/141‑1 (MQ=255) gCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGc < 3:103706/149‑1 (MQ=255) cTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGc > 4:352332/1‑148 (MQ=255) ttAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGACAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAAAGGTCTCGc > 2:193144/1‑147 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGaccac > 4:5469/1‑108 (MQ=255) cTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGaccac < 3:5469/108‑1 (MQ=255) gaagaGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCGCCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCt < 1:413229/149‑1 (MQ=255) gaagaGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCt < 2:194875/149‑1 (MQ=255) gaagaGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCt < 3:382267/149‑1 (MQ=255) gaagaGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCt < 2:259253/149‑1 (MQ=255) aagaGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAAGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCt < 6:407429/148‑1 (MQ=255) aagaGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAAGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCt > 5:407429/1‑148 (MQ=255) agagGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTgg < 6:9417/149‑1 (MQ=255) gagGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGa < 8:176567/149‑1 (MQ=255) gcggcCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGGAAATGATCATGAACGGTCTCGCCAGTTACTTCTGGAtt < 1:296311/149‑1 (MQ=255) gcggcCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTg < 5:82820/149‑1 (MQ=255) gcggcCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTg > 2:124001/1‑149 (MQ=255) gggCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCg > 2:305333/1‑149 (MQ=255) ggCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCgg < 5:289265/149‑1 (MQ=255) gCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCgg > 5:171653/1‑148 (MQ=255) aCAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAt > 3:409695/1‑149 (MQ=255) cAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAt > 5:405092/1‑148 (MQ=255) cAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGCTACGGCAAtc < 5:260888/149‑2 (MQ=255) aaTGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAAttctt < 4:167078/149‑1 (MQ=255) ttCGATAAAAAGGAGGATAACTGCCGCAAGGGCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTg < 6:301314/148‑1 (MQ=255) aTCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCAt > 3:315356/1‑149 (MQ=255) tCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCAGTAGCGGCAATTCTTCTGCTCATc > 2:417284/1‑149 (MQ=255) aaaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGc < 2:400263/141‑1 (MQ=255) aaaGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGc > 1:400263/1‑141 (MQ=255) tAACTGCCGCCACGTCCTCCTCGTGCCCCGAGCCGCCCCCGGCACCTTGGGCCCTGCCCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGACAATTCTTCTGCTCATCGACCTGTGGGcc < 6:238367/149‑1 (MQ=255) cGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCa < 1:417284/149‑1 (MQ=255) cccaaggTGCCGGGTGCAGCACCTGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTcc < 1:175758/143‑1 (MQ=255) aTCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTc < 1:124001/148‑1 (MQ=255) ccTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCCGCGTGTTCCgg > 6:403253/1‑149 (MQ=255) tCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAg > 3:103556/1‑149 (MQ=255) tGCCGGGTGCAGCACCTGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGc > 3:20684/1‑147 (MQ=255) tGCCGGGTGCAGCACCTGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGc < 4:20684/147‑1 (MQ=255) tgcACCCGGCACCTTGGGCCCTGACCAACTCTAGAGGAGG‑AATGATCATGAACGGTCACGCCAGTTACTTCTGCATTGCCGTAGCGGCAATTCTTCTGCACATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGAt > 5:326889/1‑149 (MQ=255) cACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGAt < 3:292907/147‑1 (MQ=255) aCCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCa > 1:89021/1‑120 (MQ=255) aCCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCa < 2:89021/120‑1 (MQ=255) aCCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGc > 4:384866/1‑148 (MQ=255) ccGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGt < 4:103556/149‑1 (MQ=255) ccGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGt > 8:223049/1‑149 (MQ=255) ccGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATAGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGt > 8:195488/1‑149 (MQ=255) | CTGGAGCACATCGAAGCAGGGCGCCTGCAACCGGAACTGATCGTTACTCACCGCTTAGCCCTAGAAGAGGCGGCCATGGGCTACAAAATGTTCGATCAAAAGCAGGATAACTGCCGCAAGGTCATCCTCGTGCCAGGTGCTGCACCCGGCACCTTGGGCCCTGACCACCTCTAGAGGAGG‑AATGATCATGAACGGTCTCGCCAGTTACTTCTGGATTGCCGTAGCGGCAATTCTTCTGCTCATCGACCTGTGGGCCATCGTCAGCGTGTTCCGGAGCGACAAGACCGATGCCGT > NC_002947/4479679‑4479972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |