| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,501,300 | A→T | 8.2% | intergenic (‑239/+16) | PP_3989 ← / ← PP_t60 | DNA‑cytosine methyltransferase/tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,501,300 | 0 | A | T | 8.2% | 208.5 / 7.5 | 73 | intergenic (‑239/+16) | PP_3989/PP_t60 | DNA‑cytosine methyltransferase/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (35/32); new base T (3/3); total (38/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
AAGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGCTGTC > NC_002947/4501153‑4501448 | aaGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaataat < 7:355829/149‑1 (MQ=255) ctAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGAGCCGGATGACAGGAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAggg > 7:229212/1‑149 (MQ=255) tAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATc < 2:373187/144‑1 (MQ=255) tAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCaagat > 1:373187/1‑145 (MQ=255) tAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAgg < 2:23104/147‑1 (MQ=255) tAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGc > 6:20930/1‑149 (MQ=255) tAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCGCCGAAACGAAAAAAGCCCTTCATAATCATGGc > 2:280766/1‑149 (MQ=255) ggggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCtt < 8:229212/149‑1 (MQ=255) ggggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAggg < 5:230430/146‑1 (MQ=255) ggggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCtt > 6:72031/1‑149 (MQ=255) ggAAGCGCGTCACGCCAAGCTGAAGCAGCTCTCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCAGAATAATCAGGGCtat > 2:128505/1‑146 (MQ=255) ggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGTCCTGAATAATCAGGGCTTTg < 7:176292/149‑1 (MQ=255) gAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCttttt < 6:170004/149‑3 (MQ=255) aGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAat < 3:190259/149‑1 (MQ=255) gcgTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATg < 7:252866/149‑1 (MQ=255) gTCACTCCAAGCTTAAGCAGCTCGCACACAGCAGGTGTAGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGTCTTTGAatatttc < 1:280766/149‑4 (MQ=38) gTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGc < 1:109863/149‑1 (MQ=255) gTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGc < 4:72195/149‑1 (MQ=255) tCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAACATGGCg < 5:177432/149‑1 (MQ=255) gCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAg > 1:179879/1‑149 (MQ=255) gCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAg > 2:389857/1‑149 (MQ=255) gCTTAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTag < 5:20930/149‑1 (MQ=255) cTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTa > 3:183450/1‑147 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATg < 2:271080/134‑1 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATg > 1:271080/1‑134 (MQ=255) agcagcTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGAt < 8:122984/148‑1 (MQ=255) gcagcTCGCACACAGTATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTc < 6:311905/149‑1 (MQ=255) cacacaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAACAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTa < 6:91946/149‑1 (MQ=255) acacaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAg > 2:305267/1‑149 (MQ=255) aGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAG‑TTCGAATCTCTacgctt < 3:186461/149‑6 (MQ=37) cATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAgg < 1:273344/144‑1 (MQ=255) cATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAgg > 2:273344/1‑144 (MQ=255) cATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGt > 7:246482/1‑149 (MQ=255) tgtCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGcc > 4:425332/1‑149 (MQ=255) cGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCAt > 3:276531/1‑149 (MQ=255) cGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACgg > 4:171398/1‑149 (MQ=255) cGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACg < 5:149870/148‑1 (MQ=255) ggAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACg > 2:88955/1‑147 (MQ=255) ggAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACg < 1:88955/147‑1 (MQ=255) gAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGtt < 1:389857/149‑1 (MQ=255) aaaCGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTaga > 7:126420/1‑113 (MQ=255) aaaCGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTaga < 8:126420/113‑1 (MQ=255) cGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCa < 5:72031/149‑1 (MQ=255) cGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAACCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCa < 1:305267/149‑1 (MQ=255) gATCAGAGAATTGAGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTc > 3:352861/1‑147 (MQ=255) aTTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGc < 3:399664/149‑1 (MQ=255) cGGAAACGACCCGGATGACAGAAGGGAAAAAACTGGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAg > 6:373176/1‑110 (MQ=255) cGGAAACGACCCGGATGACAGAAGGGAAAAAACTGGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAg < 5:373176/110‑1 (MQ=255) gACGCGGATGACAGAATGGAAAAATCTAGAGCCTAAGAAACGCAACAAGCCCTTAATAATCAGGGAGTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGTTAGTTGCCGTTCGACGGTTTTCAAGTCCGTTGCCTTAAACCACt < 2:27283/149‑1 (MQ=25) gACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACt > 8:120959/1‑149 (MQ=255) cAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCtt > 3:378034/1‑149 (MQ=255) cAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCtt > 2:52276/1‑149 (MQ=255) aGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTc < 2:179879/149‑1 (MQ=255) ggAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCt > 5:360409/1‑149 (MQ=255) gAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGcac > 1:396107/1‑147 (MQ=255) gAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCAACGCTTCCAGCTc > 1:338660/1‑149 (MQ=255) aaaaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCg > 1:295659/1‑149 (MQ=255) aaaaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGAGTAGAGATTCGAA‑CTCTAGGATAGTTGACAATAGACGGTTTTCAAGACCGTTGCCTTAAACAACTAGGCCACGCTACCAGCTCg > 1:162728/1‑149 (MQ=37) aaaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGt < 2:295659/149‑1 (MQ=255) aaaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGt < 4:378034/149‑1 (MQ=255) aaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGCCGGTGTTCCAGACCGTTGGCTTAAACCACTCGGCCACGCTTCCAGCTCGtt > 8:214094/1‑147 (MQ=255) aaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGtttt < 6:360409/149‑1 (MQ=255) cTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGc > 8:371939/1‑149 (MQ=255) agagCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCgg > 6:239594/1‑149 (MQ=255) tCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTACCTTAAACCACTCGGACACGCTTCCAGCTCGTTTTGCGGCCGCCa > 1:145749/1‑149 (MQ=255) cAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCa > 2:375500/1‑148 (MQ=255) aGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCat < 3:171398/148‑1 (MQ=255) cGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATAcc > 3:392526/1‑149 (MQ=255) gCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCt > 4:144692/1‑149 (MQ=255) cAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGACCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCtt < 4:276531/149‑1 (MQ=255) caaaGCCCTGATTATTCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTa > 2:396976/2‑148 (MQ=255) caaaGCCCTGATTATTCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTa < 1:396976/147‑1 (MQ=255) aaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAAt > 2:196763/1‑148 (MQ=255) aGCCCTGATTATTCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATg > 1:175288/1‑148 (MQ=255) aataatCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTAAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGc > 7:290796/1‑149 (MQ=255) taatCAGGGCTTTGAATATGGCGGAACCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAAACACTCCGCAACCCTTCCAGCTCGATTTGCGGCCGCCATAATACCTTAATGAAACACGcag > 3:370290/1‑147 (MQ=39) atCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCTCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGCTGt < 8:246482/148‑1 (MQ=255) atCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGCTGt > 3:195012/1‑148 (MQ=255) atCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGCTGTc < 4:183450/149‑1 (MQ=255) | AAGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAA‑CTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGCTGTC > NC_002947/4501153‑4501448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |