| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,502,238 | C→A | 5.1% | intergenic (+30/‑134) | yccA → / → xanP | FtsH‑mediated proteolysis substrate/modulator/xanthine permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,502,238 | 0 | C | A | 5.1% | 252.3 / 2.2 | 79 | intergenic (+30/‑134) | yccA/xanP | FtsH‑mediated proteolysis substrate/modulator/xanthine permease |
| Reads supporting (aligned to +/- strand): ref base C (39/36); new base A (2/2); total (41/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01 | |||||||||||
GATCATTCATGGTGGCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCAATGAGCTCA > NC_002947/4502091‑4502380 | gATCATTCATGGTGGCGAACGTAACTACATCATGGCAACCATCCGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGGAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTcg > 2:116567/1‑149 (MQ=255)gATCATTCATGGTGGCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTcg > 7:224054/1‑149 (MQ=255)gATCATTCATGGTGGCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTcg < 2:8465/149‑1 (MQ=255) ggtggCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACCAGGGGATTTATTGCTGTACCGCAATAAGCCCGCATCGGCGGGC‑ttt > 1:146940/1‑149 (MQ=255) gtggCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑tttt < 5:64292/148‑1 (MQ=255) tggCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑tttttt < 8:224054/149‑1 (MQ=255) tggCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑tttttt < 2:111850/149‑1 (MQ=255) gTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGgcgc > 4:92901/1‑149 (MQ=255) aCTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTg < 6:212294/148‑1 (MQ=255) tcatGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATgg < 6:332306/149‑1 (MQ=255) tGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGtt > 5:305441/1‑149 (MQ=255) cAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAg < 6:305441/149‑1 (MQ=255) aaCCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGc > 5:252321/1‑149 (MQ=255) aaCCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAAAAGCCCGCCGAAGCGGGc‑ttcttgcg < 5:154334/127‑4 (MQ=255) aaCCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAAAAGCCCGCCGAAGCGGGc‑ttcttgcg > 6:154334/1‑124 (MQ=255) cATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGc < 5:51536/149‑1 (MQ=255) aTCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCa < 3:266779/149‑1 (MQ=255) tCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAg < 4:68639/149‑1 (MQ=255) tCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAg < 3:84003/149‑1 (MQ=255) gCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATg < 8:252636/133‑1 (MQ=255) gCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATg > 7:252636/1‑133 (MQ=255) gCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGGACCGCAAGAAGCCCGGTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGGTGCAGGag > 8:68912/1‑148 (MQ=255) cTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGc < 8:330414/149‑1 (MQ=255) tATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTc < 3:427098/148‑1 (MQ=255) aTGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGt > 6:152422/1‑149 (MQ=255) aTGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGt > 2:158156/1‑149 (MQ=255) tggcGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGc < 2:132515/145‑1 (MQ=255) gtCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTgg < 3:242930/111‑1 (MQ=255) gtCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTgg > 4:242930/1‑111 (MQ=255) gATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCa > 4:343741/1‑149 (MQ=255) tCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATc > 6:404203/1‑149 (MQ=255) aCAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCg > 5:277978/1‑149 (MQ=255) aaCCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGtt > 6:181543/1‑149 (MQ=255) aaCCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAAAAGCCCGCCGAAGCGGGc‑ttcttgcgg < 4:129175/100‑5 (MQ=37) aaCCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAAAAGCCCGCCGAAGCGGGc‑ttcttgcgg > 3:129175/1‑96 (MQ=37) gtGTTTGTCAGGCTGCTGCAATTGTTTGGCATCATGGGTCGGGACGA‑CTGATTGTTTGCTGTAGCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGTATATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTtc < 8:182645/148‑1 (MQ=255) cTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTtc > 2:151302/1‑149 (MQ=255) tGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTc > 5:48923/1‑137 (MQ=255) tGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTc < 6:48923/137‑1 (MQ=255) tttGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTtct < 5:404203/147‑1 (MQ=255) tCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTAcc < 6:277978/148‑1 (MQ=255) tCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCg > 4:200752/1‑149 (MQ=255) cAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGGGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGc > 8:312684/1‑149 (MQ=255) aGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGc > 7:259536/1‑148 (MQ=255) ccTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTAc < 5:8704/143‑1 (MQ=255) ccTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTAc > 6:8704/1‑143 (MQ=255) gcAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCAt > 1:167672/1‑123 (MQ=255) gcAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCAt < 2:167672/123‑1 (MQ=255) gcAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCa > 7:7101/1‑149 (MQ=255) gcAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCa > 5:56601/1‑149 (MQ=255) cAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTAATCCCGTTTTCTCTACCGCTATCCGCCAt > 4:52553/1‑149 (MQ=255) aaTTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCAt > 5:295840/1‑148 (MQ=255) gTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCAccc > 8:61483/1‑149 (MQ=255) tttGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTa < 2:434070/129‑1 (MQ=255) tttGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTa > 1:434070/1‑129 (MQ=255) tGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCg > 4:128346/1‑148 (MQ=255) catcatGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCa > 8:225597/1‑137 (MQ=255) catcatGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCa < 7:225597/137‑1 (MQ=255) catcatGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGa < 7:61483/149‑1 (MQ=255) tcatGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGGGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAAt < 1:116567/149‑1 (MQ=255) atGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATgc > 5:340919/1‑149 (MQ=255) tGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATgcg < 5:152422/149‑1 (MQ=255) tGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGGTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATgcg < 2:146940/149‑1 (MQ=255) gggTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGGTATCCGCCATCACCCCGTAGAATgcgc > 6:45106/1‑149 (MQ=255) tgattgatTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGGTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTttcttc > 2:400285/1‑149 (MQ=255) ttgattgCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCgg > 8:127313/1‑149 (MQ=255) ttgattgCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGATGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCgg > 6:413467/1‑149 (MQ=255) gattgCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCggg < 8:353048/148‑1 (MQ=255) cTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGggcggc < 6:340919/148‑1 (MQ=255) tGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCtt > 1:133667/1‑149 (MQ=255) tACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGTTGTAGGATGCTCGTGTCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCttt < 1:140717/148‑1 (MQ=255) tACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCttt < 8:259536/148‑1 (MQ=255) ccGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCa < 5:119968/148‑1 (MQ=255) cGCAAGAAGCCCGCTTCGGCGGGCTTTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCttt > 4:200154/1‑146 (MQ=255) cGCAAGAAGCCCGCTTCGGCGGGCTTTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCa < 3:200154/148‑1 (MQ=255) cGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAg > 6:415477/1‑148 (MQ=255) cAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCaa < 6:295840/149‑1 (MQ=255) agaagCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCAATg < 3:128346/149‑1 (MQ=255) gCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCAATGAGc > 4:122822/1‑148 (MQ=255) cccGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCAATGAGCTc < 5:415477/149‑1 (MQ=255) ccGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGCCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCAATGAGCTca > 6:379375/1‑149 (MQ=255) cGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCAATGAGCTca > 4:388933/1‑148 (MQ=255) | GATCATTCATGGTGGCGAACGTAACTACATCATGGCAACCATCAGCCTGTATGTGTCGATCTACAACCTGTTTGTCAGCCTGCTGCAATTGTTTGGCATCATGGGTCGTGACGA‑CTGATTGATTGCTGTACCGCAAGAAGCCCGCTTCGGCGGGC‑TTTTTTGTGGGCGCTGGAAATGGGTTGAGCTGCAGGATGCTCGTGCCGTCATCCCGTTTTCTCTACCGCTATCCGCCATCACCCCGTAGAATGCGCTCCTTTTTTCTTCCGGGGCGGCTTTCAGCAATGAGCTCA > NC_002947/4502091‑4502380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |