| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,518,715 | T→G | 5.2% | K269Q (AAG→CAG) | clpA ← | ATP‑dependent serine protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,518,715 | 0 | T | G | 5.2% | 244.9 / 4.0 | 77 | K269Q (AAG→CAG) | clpA | ATP‑dependent serine protease |
| Reads supporting (aligned to +/- strand): ref base T (35/38); new base G (2/2); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01 | |||||||||||
CCGACGACAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTGCCCACGCCTGC > NC_002947/4518568‑4518862 | ccGACGACAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGACCAGCGCCTTGAAGCGCTtc > 5:32375/1‑149 (MQ=255) acgacAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCg < 3:254207/149‑1 (MQ=255) acgacAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGAAGCGCTTCAAGGCGCTGCTCg < 4:317344/149‑1 (MQ=255) acgacAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGAAGCGCTTCAAGGCGCTGCTCg < 3:376517/149‑1 (MQ=255) cgacAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGa < 6:339389/149‑1 (MQ=255) cgacAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGa < 5:352446/149‑1 (MQ=255) gacAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGaa < 4:177943/149‑1 (MQ=255) agcagcGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGt > 2:271899/1‑148 (MQ=255) gaagcGTCGTGAGCAGTTTGGAGGCATCCATAACCCCGCACGACGCCGAACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGACTTGAAGCGCTTCTCGAAGTca < 4:307850/147‑1 (MQ=255) cagcGACTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTcac > 7:276874/1‑149 (MQ=255) gcGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTcacca < 5:265921/149‑1 (MQ=255) cGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTcaccac > 3:311077/1‑149 (MQ=255) cTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAACGCCTTGAAGCGCTTCTCGAAGTCACCACGGt < 1:271899/149‑1 (MQ=255) gAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTa < 5:184005/147‑1 (MQ=255) gAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTAtt > 5:284143/1‑149 (MQ=255) gTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGCCGCTTGCGCAGCTCACCGAGCAGCGCCGTGACGCGGTTCTCGAAGTCACCGCGGGAGTTGGTAc > 8:292244/1‑149 (MQ=255) ggAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCg < 4:284234/148‑1 (MQ=255) gAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCga < 6:409783/148‑2 (MQ=255) ggCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCa < 8:148410/149‑1 (MQ=255) atcACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTAc < 7:385199/136‑1 (MQ=255) atcACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTAc > 8:385199/1‑136 (MQ=255) atcACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGgc > 4:213505/1‑149 (MQ=255) accatcaccgACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGcc > 5:249981/8‑149 (MQ=255) cccgcccgACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGcc > 2:376990/1‑147 (MQ=255) cccgcccgACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGcc > 2:371290/1‑147 (MQ=255) cccgcccgACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGcc > 8:332403/1‑147 (MQ=255) cccgcccgACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCa < 1:236966/149‑1 (MQ=255) ccgcccgACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGcc > 7:165207/1‑146 (MQ=255) gACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAg > 5:322480/1‑149 (MQ=255) gACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAg > 2:287426/1‑149 (MQ=255) aCGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAgg < 6:284143/149‑1 (MQ=255) gccgcACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGACCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGa < 6:32375/149‑1 (MQ=255) ccgcACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAg < 8:276874/149‑1 (MQ=255) ccgcACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAg < 5:207531/149‑1 (MQ=255) aCCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTaca > 5:244525/1‑149 (MQ=255) cGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTAcacc < 5:273042/149‑1 (MQ=255) tgatgGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTgc > 6:385796/1‑149 (MQ=255) gtgtGAATTTCGTCGATGAACAGGATGGTCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCcag < 3:321728/149‑1 (MQ=255) tgAATTTCGTCGATGAACAGGATGGCCTGCGTACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGG‑CAGCA‑AGGCGCCCAg > 1:265568/1‑115 (MQ=255) tgAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGG‑CAGCA‑AGGCGCCCAg < 2:265568/115‑1 (MQ=255) gAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAgg < 7:332403/149‑1 (MQ=255) aTTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTc < 3:178893/149‑1 (MQ=255) cgtcgATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAgg < 5:378979/148‑1 (MQ=255) gtcgATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGTCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCa > 5:17508/1‑149 (MQ=255) tcgATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCAc > 4:116827/1‑149 (MQ=255) tcgATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCAc > 4:240128/1‑149 (MQ=255) gATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCt > 5:422519/1‑149 (MQ=255) tGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGa > 3:421083/1‑149 (MQ=255) tGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGa < 4:311077/149‑1 (MQ=255) aaCAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGAcc < 3:213505/149‑1 (MQ=255) ggCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATcgacga > 3:2387/1‑149 (MQ=255) gCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGAt > 6:77307/1‑149 (MQ=255) gCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGAt < 2:201538/149‑1 (MQ=255) cTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGc < 6:249981/149‑1 (MQ=255) cGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGtt > 7:96923/1‑149 (MQ=255) cGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGt < 1:165754/148‑1 (MQ=255) cGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGt < 3:240128/148‑1 (MQ=255) gACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTg < 3:116827/149‑1 (MQ=255) ttGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAgg < 5:92276/87‑1 (MQ=255) ttGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAgg > 6:92276/1‑87 (MQ=255) gcgcAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAgg < 8:165207/148‑1 (MQ=255) aGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTc > 5:24803/1‑149 (MQ=255) aGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTc < 5:252680/149‑1 (MQ=255) tCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGc > 3:296449/1‑149 (MQ=255) tCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGc > 1:100902/1‑149 (MQ=255) ttcGAGAAGCGCTTCAAGGCGCTGCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGa > 3:66599/3‑149 (MQ=255) ccGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGAt > 8:388462/1‑149 (MQ=255) cGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCAGAGGCGCCCAGATCAAGGGTGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCCGCCCTTCGGCGAt > 1:336930/1‑149 (MQ=255) cGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATg < 7:292244/149‑1 (MQ=255) cGAGAAGCGCTTCAAGGCGCTGCTCGAAGACACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACAACACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATg > 1:33437/1‑149 (MQ=255) cagcGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCg > 2:930/1‑149 (MQ=255) gcCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCtt < 8:96923/149‑1 (MQ=255) ccTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTg > 8:222226/1‑149 (MQ=255) ccTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTg > 5:304682/1‑149 (MQ=255) cTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTGc < 1:376990/149‑1 (MQ=255) cTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTGc < 1:371290/149‑1 (MQ=255) cTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTGc < 7:388462/149‑1 (MQ=255) gAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTGCCCa > 6:436162/1‑149 (MQ=255) ttCTCGAAGTCACCACCGTTTTCGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTGCCCACgcctgc < 6:302247/149‑1 (MQ=255) | CCGACGACAGCAGCGGCTTGAGCAGGTTGGAGGCATCCATCACCCCGCCCGACGCCGCACCGGCGCCGATGATGGTGTGAATTTCGTCGATGAACAGGATGGCCTGCGGACGCTTGCGCAGCTCACCGAGCAGCGCCTTGAAGCGCTTCTCGAAGTCACCACGGTATTTGGTACCGGCCAGCA‑AGGCGCCCAGATCAAGGGAGTACACCACGCTCTGCGCCAGCAGGTCAGGCACCTGACCATCGACGATGCGTTTGGCCAGGCCTTCGGCGATGGCCGTCTTGCCCACGCCTGC > NC_002947/4518568‑4518862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |