| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,707,318 | C→G | 5.4% | intergenic (‑20/+90) | PP_4163 ← / ← PP_4164 | hypothetical protein/alpha/beta hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,707,318 | 0 | C | G | 5.4% | 353.8 / 6.2 | 108 | intergenic (‑20/+90) | PP_4163/PP_4164 | hypothetical protein/alpha/beta hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (52/50); new base G (3/3); total (55/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
CCGTCGCCGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTGCGCCCTGCG > NC_002947/4707172‑4707463 | ccGTCGCCGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑GAg > 4:278153/1‑149 (MQ=255) ccGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCACTTGGCGAACCAGGCGGCGCT‑CAGCGCCg < 1:246446/149‑1 (MQ=255) cGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑GAGCGCCgcc < 4:78720/149‑3 (MQ=255) gggCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑GAGCGCCgcct < 3:278153/149‑4 (MQ=255) gggCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑GAGCGCCgcct < 3:300215/149‑4 (MQ=255) gggCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAAt > 4:93481/1‑149 (MQ=255) ggCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGa < 1:230953/146‑1 (MQ=255) ggCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGa > 2:230953/1‑146 (MQ=255) cGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTg > 6:252594/1‑148 (MQ=255) cGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGa < 4:2565/149‑1 (MQ=255) ttGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAg > 1:278978/1‑149 (MQ=255) ttGATCGACCACCTTAGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAg > 2:307303/1‑149 (MQ=255) accaccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAAt > 1:161626/1‑137 (MQ=255) accaccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAAt < 2:161626/137‑1 (MQ=255) accaccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAg > 4:302412/1‑148 (MQ=255) caccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGAt > 7:16008/1‑149 (MQ=255) caccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGAt > 5:340020/1‑149 (MQ=255) ccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGt < 3:93481/149‑1 (MQ=255) ggCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCt < 2:108306/147‑1 (MQ=255) ggCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCt < 1:216615/147‑1 (MQ=255) cGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTg < 4:58885/139‑1 (MQ=255) cGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTg > 3:58885/1‑139 (MQ=255) cGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGc < 7:325852/147‑1 (MQ=255) cGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGc < 1:307303/147‑1 (MQ=255) ggACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATgg < 3:302412/149‑1 (MQ=255) aCCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGtt < 6:152996/149‑1 (MQ=255) cGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGt > 4:246684/1‑149 (MQ=255) ggTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGtc > 4:253897/1‑149 (MQ=255) ggTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGtc > 5:133312/1‑149 (MQ=255) gTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGtct > 6:370692/1‑149 (MQ=255) gCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCt < 6:340020/149‑1 (MQ=255) gCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAAGTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGGCTCCCTGt > 5:232096/1‑148 (MQ=255) cGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGTGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTc > 2:294410/1‑148 (MQ=255) gCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAAc < 3:294528/149‑1 (MQ=255) ccACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAAccc > 7:173105/1‑149 (MQ=255) aCGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGc > 3:156719/1‑149 (MQ=255) aCGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGc > 6:372274/1‑149 (MQ=255) aCGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGc > 5:31778/1‑149 (MQ=255) gACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGcc > 7:119743/1‑148 (MQ=255) acGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGc > 5:49346/1‑149 (MQ=255) ggggTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTc < 2:278978/149‑1 (MQ=255) gggTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTc > 6:419976/1‑148 (MQ=255) ggCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGacac > 1:401260/1‑149 (MQ=255) cGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACtt < 8:119743/149‑1 (MQ=255) gAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGTCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTg > 8:213907/1‑149 (MQ=255) gAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTg > 5:347813/1‑149 (MQ=255) gCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTc < 6:49346/149‑1 (MQ=255) cACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTcc > 8:289510/1‑149 (MQ=255) ccAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCgg > 4:286285/1‑149 (MQ=255) tgggccggcaGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGt < 6:354511/147‑1 (MQ=255) caggcaggCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGt > 5:13212/1‑149 (MQ=255) caggcaggCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCCCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGt < 5:372274/149‑1 (MQ=255) aggcaggcAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTg < 6:420649/149‑1 (MQ=255) ggcaggcaGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTg > 4:158322/1‑148 (MQ=255) ggcaggcaGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTg > 7:256574/1‑148 (MQ=255) gcagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTgg > 1:394658/1‑88 (MQ=255) gcagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTc < 8:173105/149‑1 (MQ=255) cagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCgg < 4:421738/140‑1 (MQ=255) cagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCgg > 3:421738/1‑140 (MQ=255) cagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTc > 6:415850/1‑148 (MQ=255) ccAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAg > 5:248862/1‑148 (MQ=255) ccAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGc < 2:153429/149‑1 (MQ=255) aaGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTc > 2:343975/1‑143 (MQ=255) aaGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTc < 1:343975/143‑1 (MQ=255) ggCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGTGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAg < 1:294410/149‑1 (MQ=255) gCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGc > 5:256908/1‑149 (MQ=255) tGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCTGGAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTAGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCa > 1:308028/1‑148 (MQ=255) cGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGGT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAaag < 5:370692/148‑1 (MQ=255) gAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAaagaa < 2:401260/149‑1 (MQ=255) gAATGGAAACAGCCACGCTCA‑TTGGCGAACCAGGCGCCGCT‑CAGAGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTAGTCTCCCAGTTCAACCCGCAAAGCCTCCACACTTGTCTGGTGCAAGTCACGCAAAGCCAaag > 7:150551/1‑147 (MQ=255) aaTGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCaaa < 6:52019/145‑1 (MQ=255) aaTGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCaaa > 5:52019/1‑145 (MQ=255) aTGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGc < 7:289510/149‑1 (MQ=255) aTGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGc < 8:256574/149‑1 (MQ=255) gAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGAt > 3:383294/1‑149 (MQ=255) aaaCAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGAtt > 1:10097/1‑149 (MQ=255) aaaCAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGAtt < 3:253897/149‑1 (MQ=255) aCAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGa < 6:13212/149‑1 (MQ=255) gCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACa < 6:347813/149‑1 (MQ=255) aCGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGt < 6:31778/149‑1 (MQ=255) aCGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGt > 2:193785/1‑149 (MQ=255) gCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCt < 6:248862/149‑1 (MQ=255) gCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCt > 8:34829/1‑149 (MQ=255) ttGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGcaa > 2:294316/1‑148 (MQ=255) gCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGcaacaa < 5:419976/148‑1 (MQ=255) gCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAg > 7:340670/1‑149 (MQ=255) cGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAgg < 3:158322/149‑1 (MQ=255) gAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAggg > 3:325841/1‑149 (MQ=255) gAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAggg < 6:133312/149‑1 (MQ=255) ttcaattcggcgCT‑GAGCGCCGCATTGAAGCTCCAGGATGTCAGGCAGTTGCATCGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGGAAGTCAAGCAAAGCAAAAGAAGCGATTGATACAGTCTGCAACAAGGGc > 4:166812/8‑149 (MQ=255) ccAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGAAGTCTGCCAGTAGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTTCAACAAGGCCTg > 5:36962/1‑149 (MQ=255) cAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAaagaag < 5:19622/120‑1 (MQ=255) cAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAaagaag > 6:19622/1‑120 (MQ=255) cAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGAt < 8:161215/128‑1 (MQ=255) cAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGAt > 7:161215/1‑128 (MQ=255) cAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTgc < 7:401174/149‑1 (MQ=255) gcgcT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTgc < 1:360409/143‑1 (MQ=255) gcgcT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTgc > 2:360409/1‑143 (MQ=255) cgcT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTGCGCCCTgc < 2:10097/149‑1 (MQ=255) gcT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTGCGCCCTgcg < 6:85908/149‑1 (MQ=255) | CCGTCGCCGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCA‑TTGGCGAACCAGGCGGCGCT‑CAGCGCCGAATTGAAGCTCCAGGATGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTGCGCCCTGCG > NC_002947/4707172‑4707463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |