mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 257 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6122842 | 94 (1.310) | 4 (0.060) | 4/252 | NT | 4.2% | coding (766/1446 nt) | PP_5372 | aldehyde dehydrogenase |
| ? | NC_002947 | = 6122879 | 92 (1.370) | coding (729/1446 nt) | PP_5372 | aldehyde dehydrogenase | |||||
| * | ? | NC_002947 | = 6117180 | 98 (1.370) | 3 (0.040) | 3/250 | NT | 3.2% | coding (1389/1401 nt) | lpd | dihydrolipoyl dehydrogenase |
| ? | NC_002947 | = 6117213 | 91 (1.360) | intergenic (+21/+91) | lpd/PP_5367 | dihydrolipoyl dehydrogenase/transketolase domain‑containing protein | |||||
| * | ? | NC_002947 | 6115841 = | 124 (1.730) | 5 (0.070) | 5/256 | NT | 4.2% | coding (50/1401 nt) | lpd | dihydrolipoyl dehydrogenase |
| ? | NC_002947 | 6115887 = | 110 (1.610) | coding (96/1401 nt) | lpd | dihydrolipoyl dehydrogenase | |||||
| * | ? | NC_002947 | 6087113 = | 102 (1.420) | 4 (0.060) | 4/256 | NT | 3.9% | coding (635/1071 nt) | oruR | ornithine utilization transcriptional regulator |
| ? | NC_002947 | 6087151 = | 100 (1.460) | coding (673/1071 nt) | oruR | ornithine utilization transcriptional regulator | |||||
| * | ? | NC_002947 | 6086071 = | 76 (1.060) | 3 (0.040) | 3/262 | NT | 3.8% | coding (1181/1437 nt) | aspA | aspartate ammonia‑lyase |
| ? | NC_002947 | 6086110 = | 77 (1.100) | coding (1220/1437 nt) | aspA | aspartate ammonia‑lyase | |||||
| * | ? | NC_002947 | = 6070525 | 102 (1.420) | 4 (0.060) | 4/256 | NT | 3.8% | coding (120/891 nt) | PP_5324 | two‑component system response regulator |
| ? | NC_002947 | = 6070551 | 104 (1.520) | coding (94/891 nt) | PP_5324 | two‑component system response regulator | |||||
| * | ? | NC_002947 | 6031272 = | 96 (1.340) | 3 (0.040) | 3/260 | NT | 3.2% | coding (126/1590 nt) | dppA‑IV | dipeptide transport protein |
| ? | NC_002947 | 6031357 = | 87 (1.250) | coding (211/1590 nt) | dppA‑IV | dipeptide transport protein | |||||
| * | ? | NC_002947 | = 6008493 | 75 (1.050) | 3 (0.040) | 3/256 | NT | 4.0% | coding (779/1389 nt) | norM | multidrug resistance protein NorM |
| ? | NC_002947 | = 6008527 | 72 (1.050) | coding (813/1389 nt) | norM | multidrug resistance protein NorM | |||||
| * | ? | NC_002947 | 5992984 = | 77 (1.070) | 4 (0.060) | 4/260 | NT | 4.9% | coding (975/1263 nt) | opdB | proline‑specific outer membrane porin D |
| ? | NC_002947 | 5993073 = | 79 (1.140) | coding (1064/1263 nt) | opdB | proline‑specific outer membrane porin D | |||||
| * | ? | NC_002947 | 5992446 = | 90 (1.260) | 3 (0.040) | 3/254 | NT | 3.5% | coding (437/1263 nt) | opdB | proline‑specific outer membrane porin D |
| ? | NC_002947 | 5992516 = | 81 (1.190) | coding (507/1263 nt) | opdB | proline‑specific outer membrane porin D | |||||