New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3494883 = | 68 (1.190) | 3 (0.060) | 3/266 | 5.7 | 4.4% | coding (1331/1503 nt) | puuD | uricase/urate oxidase |
? | NC_002947 | 3494924 = | 65 (1.200) | coding (1290/1503 nt) | puuD | uricase/urate oxidase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TGCAATACATCTTCGCCACTTCGCGCATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGATGTCGAGCGCTTCCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3495033‑3494883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccaCTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTGGCGATGT > NC_002947/3494924‑3495069 TGCAATACATCTTCGCCACTTCGCGCATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGATGTCGAGCGCTTCCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCA > 5:34701/1‑147 CAATACATCTTCGCCACTTCGCGCATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATCGATGTCGAGCGCTTCCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGC > 2:73985/1‑147 AATACATCTTCGCCACTTCGCGCATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGATGTCGAGCGCTTCCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGC > 3:199545/1‑146 ATACATCTTCGCCACTTCGCGCATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGATGTCGAGCGCTTCCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGCCA > 5:213488/1‑147 TACATCTTCGCCACTTCGCGCATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGATGTCGAGCGCTTCCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGCCA > 5:89578/1‑146 AGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGCCACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTG > 7:96303/1‑137 AGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGCCACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTG < 8:96303/137‑1 CTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGCCACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTG > 1:49137/1‑146 GCCAGCCACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTG < 4:312690/147‑1 CAGCCACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTGGC < 5:82848/147‑1 CAGCCACTGGTTGAGGAAGCGCTCGACATCCATCCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTGGC > 1:45620/1‑147 AGCCACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTG > 4:304955/1‑144 CACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTGGCGATGT > 8:19581/1‑148 ACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTG > 5:250414/1‑140 ACTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTG < 6:250414/140‑1 TGCAATACATCTTCGCCACTTCGCGCATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGATGTCGAGCGCTTCCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGATACCGCCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3495033‑3494883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccaCTGGTTGAGGAAGCGCTCGACATCCATGCGCGAGGCGAAGCTGCCGATCTTGTCGCGCATGATCGCCTTCATGTAGTGGGCGATGCGCGAAGTGGCGAAGATGTATTGCAGCTGGGCCGACAGGCGTGCGTTGGCGTTGGCGATGT > NC_002947/3494924‑3495069 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |