Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	6098363	6098439	77	15 [12]	[12] 14	PP_5350	RpiR family transcriptional regulator

ATCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGG  >  NC_002947/6098391‑6098574                                                  |                                                                                                                                       aTCTCGGTGTCTTCATGCTCGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCCCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACt                                      >  1:163181/1‑148 (MQ=255) aTCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGAACGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGAc                                       >  5:334295/1‑147 (MQ=255)  tctcGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCAAAGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTg                                     >  1:267842/1‑148 (MQ=255)            ttCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATac                             >  5:112327/1‑146 (MQ=255)                  cACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGa                                                 <  7:121267/120‑1 (MQ=255)                  cACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGa                                                 >  8:121267/1‑120 (MQ=255)                  cACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACACGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGc                      >  7:225167/1‑147 (MQ=255)                      tCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGaaa                                >  3:182829/1‑133 (MQ=255)                      tCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGaaa                                <  4:182829/133‑1 (MQ=255)                      tCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCccca                  >  6:253353/1‑147 (MQ=255)                                  ttGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGttt       >  1:93243/1‑146 (MQ=255)                                     aCCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAggg  >  3:226152/1‑148 (MQ=255)                                                  cGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCg               >  5:167201/1‑122 (MQ=255)                                                  cGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCg               <  6:167201/122‑1 (MQ=255)                                                  |                                                                                                                                       ATCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGG  >  NC_002947/6098391‑6098574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑