Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	197,695	0	G	C	21.5%	162.2 / 30.1	65	T1067T (ACG→ACC)	PP_0168	putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base G (23/28);  new base C (9/5);  total (32/33)
Fisher's exact test for biased strand distribution p-value = 2.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCTTGTC  >  NC_002947/197553‑197838                                                                                                                                               |                                                                                                                                                   ttACCGTTGAAGCCGGCAAGACCCAGGTCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGc                                                                                                                                               <  7:118490/148‑1 (MQ=37) ttACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCgg                                                                                                                                                >  6:161056/1‑147 (MQ=37)  tACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCt                                                                                                                                              >  8:256261/1‑148 (MQ=12)    ccGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCt                                                                                                                                              >  1:234789/1‑146 (MQ=12)     cGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTAGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCt                                                                                                                                              >  4:38548/1‑145 (MQ=255)      gTTGAAGCCGGCAAGACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCAAAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGa                                                                                                                                          >  4:26914/1‑148 (MQ=12)      gTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGCACCCGACCCCGGCTCAGa                                                                                                                                          >  7:95858/1‑148 (MQ=255)        tGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGc                                                                                                                                               <  4:211040/141‑1 (MQ=12)        tGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGc                                                                                                                                               >  3:211040/1‑141 (MQ=12)          aaGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCAc                                                                                                                                      <  1:160666/148‑1 (MQ=37)           aGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCAc                                                                                                                                      >  1:35180/1‑147 (MQ=12)           aGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCAc                                                                                                                                      <  7:140940/147‑1 (MQ=12)              cGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGa                                                                                                                                    >  6:147909/1‑146 (MQ=37)               ggCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCa                                                                                                                                 <  4:170662/148‑1 (MQ=37)                gCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAc                                                                                                                                <  1:174725/148‑1 (MQ=38)                gCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCaa                                                                                                                                <  3:204565/148‑2 (MQ=9)                  aaaaCCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCaac                                                                                                                               >  3:72832/4‑145 (MQ=2)                       ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTc                                                                                                                          <  6:236129/147‑1 (MQ=39)                          gggCTGCGTCGATTTCCAGACGCCGGCGAATGACGTCTACATCAACGTTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCTAGCTACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGt                                                                                                                       <  6:237035/147‑1 (MQ=14)                            gCATCGGCGATTTCCAGACCCCGGCGAATGACTTCTACAACAACGGTTCGACTGTCAGCGTCACCATCTAGAACGCCACAGGCGGTAATTTCGAGCAACTTACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGa                                                                                                                    <  4:229875/148‑1 (MQ=14)                                 gTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGAcacca                                                                                                               <  7:233528/148‑1 (MQ=39)                                    gacttCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAAACCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCacta                                                                                                            >  3:103977/4‑148 (MQ=255)                                      tttCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCactac                                                                                                           <  8:266003/147‑1 (MQ=39)                                           aGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGa                                                                                                      <  6:237353/147‑1 (MQ=255)                                           aGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGAc                                                                                                     <  4:103977/148‑1 (MQ=12)                                             aCCCCGGCGAATGACGTCTACAACAACGGTGCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAc‑‑c                                                                                                  <  6:80454/147‑1 (MQ=255)                                               cccGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAc‑‑cc                                                                                                 >  5:272382/1‑146 (MQ=255)                                                  ggCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGAcc                                                                                            >  7:215132/1‑148 (MQ=255)                                                             tCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑Caa                                                                                 >  5:138078/1‑147 (MQ=255)                                                             tCTACAACAACGGCTCGACCGTCAGCGTCACCATCGAGAGCGCCACTGGCGGCAACTTCGAACAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAg                                                                                <  1:178405/148‑1 (MQ=11)                                                                 caacaaCGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTg                                                                            <  7:7161/148‑1 (MQ=255)                                                                   acaacGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGAc                                                                          >  4:165168/1‑148 (MQ=255)                                                                   acaacGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCCAGCAACTGACCCCGAACCAGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACGACTGCCAA‑‑CCTGACCGCCTCGC‑CAATCGTGAc                                                                          >  4:153724/1‑148 (MQ=17)                                                                     aacGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGAcc                                                                         >  4:196968/1‑147 (MQ=255)                                                                        ggTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAg                                                                     >  2:102739/1‑148 (MQ=255)                                                                           tCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAggcg                                                                  >  1:44147/1‑148 (MQ=255)                                                                           tCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAggc                                                                   <  6:272382/147‑1 (MQ=255)                                                                               cTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGgcggcg                                                               <  5:147909/147‑1 (MQ=255)                                                                                    aGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATc                                                          <  7:158318/147‑1 (MQ=255)                                                                                    aGCGTCACAATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCTGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCa                                                         <  3:185373/148‑1 (MQ=255)                                                                                      cGTCACCATCGAGAACGCCACAGGCTGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACGACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCAcc                                                       <  3:153724/148‑1 (MQ=255)                                                                                             aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCg                                                                                                                         >  5:180513/1‑78 (MQ=39)                                                                                             aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCg                                                                                                                         <  6:180513/78‑1 (MQ=39)                                                                                               cGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCa                                                         >  1:183137/1‑137 (MQ=255)                                                                                               cGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCa                                                         <  2:183137/137‑1 (MQ=255)                                                                                               cGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCAC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGt                                               >  2:191023/1‑147 (MQ=255)                                                                                                gagaACGCCACAGGCGGTAATTTCGAGCAACTGCCCCCGAACCCGACGCCGGCTCAGACCCCGATCACCGACTCGGTCGCCACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CACGCGTGCCCGAAGGCGGCGTGATCACCTCCACCGTg                                              >  6:184330/1‑147 (MQ=18)                                                                                                 agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGAc                                            >  7:225176/1‑148 (MQ=255)                                                                                                  gaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGTGGCGTGATCACCTACACCGTGAcc                                           >  2:299147/1‑148 (MQ=255)                                                                                                    aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCt                                         <  2:12809/148‑1 (MQ=255)                                                                                                     ggCCACAGCCGGTAATTTCGAGCAACTGACCCCGAACCCGACGGCGGCTCAGACCACGATCACCGACTCGTTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGAGCGAAGGCGGCGTGATCACCTACACCGTGACCCt                                         <  6:71666/146‑1 (MQ=255)                                                                                                              cGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATcc                                <  5:161056/147‑1 (MQ=255)                                                                                                                gTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGTGGCGTGATCACCTACACCGTGACCCTGAGCAACCCTGc                             <  1:299147/148‑1 (MQ=255)                                                                                                                   aTTTCGAGCAACTCACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCa                          <  4:195854/148‑1 (MQ=255)                                                                                                                        gAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGc                                                                                     <  7:67069/85‑1 (MQ=255)                                                                                                                        gAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGc                                                                                     >  8:67069/1‑85 (MQ=255)                                                                                                                          gCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGcc                    >  6:120192/1‑147 (MQ=255)                                                                                                                           cAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCgg                  >  3:142328/1‑148 (MQ=255)                                                                                                                           cAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCgg                  <  2:44147/148‑1 (MQ=255)                                                                                                                                  ccccGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCg            <  6:138078/147‑1 (MQ=255)                                                                                                                                    ccGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGa         >  4:312320/1‑148 (MQ=255)                                                                                                                                      gAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAcc       >  2:120292/1‑148 (MQ=255)                                                                                                                                      gAAACCGACCCCCGCTCACACCACGATATCCGACTCGGTGGACACAACAAAATCGACCTCCTGACCGCCTCGCTCCTGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTg          <  1:102739/148‑1 (MQ=9)                                                                                                                                         cccGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCtt     >  6:186871/1‑147 (MQ=255)                                                                                                                                           agACGCCGTCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACAGCCACGC‑CCAGCATGACCGAAGGACGCCTGATCACCAAAACACACACCCAGAGCAATCCTGCCCACACGCCGGTAACCCTCAccaagtc  >  4:274642/2‑143 (MQ=255)                                                                                                                                               |                                                                                                                                                   TTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAC‑‑CCTGACCGCCTCGC‑CAAGCGTGACCGAAGGCGGCGTGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCTTGTC  >  NC_002947/197553‑197838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑