Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 1,070,248 +GA intergenic (+48/+94) aroP‑I → / ← PP_0928 aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,070,2461.G88.0% 223.5 / 24.7 76intergenic (+46/+96)aroP‑I/PP_0928aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
Reads supporting (aligned to +/- strand):  ref base . (6/3);  new base G (31/35);  total (38/38)
Fisher's exact test for biased strand distribution p-value = 3.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0029471,070,2462.A88.0% 222.3 / 24.9 76intergenic (+46/+96)aroP‑I/PP_0928aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
Reads supporting (aligned to +/- strand):  ref base . (6/3);  new base A (32/34);  total (38/38)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑G‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACA  >  NC_002947/1070098‑1070379
                                                                                                                                                            ||                                                                                                                                       
ccTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑t‑‑gt                                                                                                                                           >  7:239315/1‑149 (MQ=255)
 cggACGCCGCCGATGCGCATCTCGGTAATGCTGATCCCGGCATGGACCGCTGTGCTGTGGGGGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTCTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑t‑‑gt‑‑g                                                                                                                                        <  4:269926/147‑1 (MQ=255)
    aCGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑G‑‑a                                                                                                                                     <  1:317369/147‑1 (MQ=255)
             aTTCGCATCTCGGTAATGCTGATCGCGGCATTGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGTCCTGATAGGGTTTCTTCGTAAGGGGTATCCCGTT‑AGGTTTTCGGCGC‑‑C‑‑TGAGA‑‑G‑‑ATCGAGcgcc                                                                                                                            >  2:304512/1‑149 (MQ=255)
                 gCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑G‑‑agatcg                                                                                                                                <  4:148194/139‑6 (MQ=255)
                 gCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑G‑‑agatcg                                                                                                                                >  3:148194/1‑134 (MQ=255)
                 gCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGACGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCcgcgc                                                                                                                        >  1:96987/1‑149 (MQ=255)
                    tctcGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCgcggg                                                                                                                     >  5:220257/1‑149 (MQ=255)
                        ggTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCgcgggcg                                                                                                                   <  2:156512/147‑1 (MQ=255)
                        ggTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCgcggg                                                                                                                     <  5:142921/145‑1 (MQ=255)
                         gTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGgcggcg                                                                                                                <  6:220257/149‑1 (MQ=255)
                         gTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGgcggcg                                                                                                                >  1:6005/1‑149 (MQ=255)
                         gTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGGATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCTCCGCGCGGgcggcg                                                                                                                <  7:306518/149‑1 (MQ=255)
                               cTGATCCCGGCATGGATCGCTGTGCTGGGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGa                                                                                                           <  5:293291/148‑1 (MQ=255)
                               cTGATCCCGGAATGGATGGCTGTGCTGTGGGTGTCTTTGTAGCTGAAGAAGGCTAGCGAGGGCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCTAGCGCGGCGCGGGCGGCGCTCGa                                                                                                           <  2:96987/148‑1 (MQ=255)
                                tGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGAt                                                                                                          >  1:157805/1‑148 (MQ=255)
                                  aTCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGAt                                                                                                          <  2:157805/146‑1 (MQ=255)
                                     ccGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTcaca                                                                                                    <  8:239315/149‑1 (MQ=255)
                                      cGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAg                                                                                                   >  4:72957/1‑149 (MQ=255)
                                         cATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGc                                                                                                 >  2:125868/1‑148 (MQ=255)
                                             gATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATg                                                                                             >  3:202888/1‑148 (MQ=255)
                                              aTCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGa                                                                                            >  1:25748/1‑148 (MQ=255)
                                                 gctgtgctgtGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGTGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGc                                                                                        <  6:293017/149‑1 (MQ=255)
                                                 gctgtgctgtGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGggcggc                                                                                                                 <  6:132790/124‑1 (MQ=255)
                                                 gctgtgctgtGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGggcggc                                                                                                                 >  5:132790/1‑124 (MQ=255)
                                                 gctgtgctgtGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGc                                                                                        >  5:6052/1‑149 (MQ=255)
                                                  ctgtgctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑G‑‑aga                                                                                                                                   <  7:28138/103‑3 (MQ=255)
                                                  ctgtgctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑G‑‑aga                                                                                                                                   >  8:28138/1‑101 (MQ=255)
                                                     tgctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCt                                                                                      <  3:99392/147‑1 (MQ=255)
                                                     tgctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCt                                                                                      >  4:99392/1‑147 (MQ=255)
                                                     tgctgtgGGTGGCTTTCAAGATGAAGAAGGCTCGCCAGGCCAAGGGCTGAACGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGCCTC‑‑T‑‑GA‑‑G‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTa                                                                                     >  3:236515/1‑148 (MQ=38)
                                                        tgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCg                                                                                                <  6:324217/134‑1 (MQ=255)
                                                        tgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCg                                                                                                >  5:324217/1‑134 (MQ=255)
                                                          tgggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGT‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGc                                                                                <  2:63155/148‑1 (MQ=255)
                                                           gggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCAt                                                                              <  6:6052/149‑1 (MQ=255)
                                                           gggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCAt                                                                              <  5:221716/149‑1 (MQ=255)
                                                             gtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGc                                                                            <  2:287662/149‑1 (MQ=255)
                                                              tggCTTTGAAGCAGAAGAAGGCTAGCCACGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTACCAGGCGATGAAAGCCTAAACGCCTGcc                                                                           >  4:47385/1‑148 (MQ=37)
                                                                  tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCAt                                                                              >  8:21915/1‑142 (MQ=255)
                                                                  tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCAt                                                                              <  7:21915/142‑1 (MQ=255)
                                                                  tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTg                                                                       >  1:36638/1‑149 (MQ=255)
                                                                  tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTg                                                                       >  7:223096/1‑149 (MQ=255)
                                                                  tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTg                                                                       >  6:162286/1‑149 (MQ=255)
                                                                  tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTg                                                                       >  3:47300/1‑149 (MQ=255)
                                                                    tCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTg                                                                       <  7:82872/147‑1 (MQ=255)
                                                                      aaGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTggcgg                                                                   >  2:4246/1‑149 (MQ=255)
                                                                           gaagaaGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCt                                                               >  8:78672/1‑148 (MQ=255)
                                                                             agaagGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAc                                                            <  2:36638/149‑1 (MQ=255)
                                                                             agaagGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAc                                                            <  2:25748/149‑1 (MQ=255)
                                                                              gaagGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGGGCTCGGTGTCACAGGGGATGAAAGCCTAAAGGCATTCGTGAGGCGGCCCTGTcg                                                           >  5:37800/1‑149 (MQ=37)
                                                                                      gCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTGAGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTccc                                                    >  1:79472/1‑149 (MQ=38)
                                                                                        cAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAc                                                            <  1:314489/138‑1 (MQ=255)
                                                                                        cAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAc                                                            >  2:314489/1‑138 (MQ=255)
                                                                                           gCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAcgc                                                          >  3:249014/1‑137 (MQ=255)
                                                                                           gCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAcgc                                                          <  4:249014/137‑1 (MQ=255)
                                                                                            ccAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCAt                                             >  6:190108/1‑149 (MQ=255)
                                                                                              aaGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTaaa                                                                                   <  8:147328/109‑1 (MQ=255)
                                                                                                gggCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGccc                                         <  1:125868/149‑1 (MQ=255)
                                                                                                      aTCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑GATATCGAGCGCCGCGCGGGCGGCGCGCGCTCTCACAGGCGATGAAAGCCTTAAGGCATGCGTCTGGCGGCCCAGACGCGTTCCCCTTCCATGCCCCGCAAt                                   >  1:360526/1‑149 (MQ=38)
                                                                                                       tCGGGTTTGTTCGTAAGGGGTCTGCCGGT‑AGGTTGTCGGCGC‑‑C‑‑T‑‑GTGCG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtg                                  <  8:285213/149‑1 (MQ=38)
                                                                                                         gggTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑CAGT‑‑GA‑‑G‑‑ATCGACCGCCGCCCGGCCCGGGCAAGAACACACAGGAGATGAAAGACTAAAGGCATTCGTAATGCGGCCCTGACGCGTTCCCCTTCCCTTCCCCTGAAtcct                                >  4:37005/1‑149 (MQ=255)
                                                                                                           gTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTc                                                <  6:95379/131‑1 (MQ=255)
                                                                                                           gTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTc                                                >  5:95379/1‑131 (MQ=255)
                                                                                                                   gTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGcc                       <  3:72957/148‑1 (MQ=255)
                                                                                                                    tAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgctgc                              <  4:97338/140‑1 (MQ=255)
                                                                                                                    tAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgctgc                              >  3:97338/1‑140 (MQ=255)
                                                                                                                    tAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCaa                     <  4:173990/149‑1 (MQ=255)
                                                                                                                      aGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAg                    <  5:190108/148‑1 (MQ=255)
                                                                                                                        gggTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcac                 <  4:202888/149‑1 (MQ=255)
                                                                                                                          gTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATAGAGCGCCGCGCGGGCGGGGGTCGATCTGCCAGGGGATGAAAGCCTTAAGGCATGCGTCTGGCGGGCCTGACGCGTTGCCCGTGCATGCCCCGCAATGCTGCCTCCGCCAAgcccgc               >  2:165956/1‑149 (MQ=255)
                                                                                                                            aTGCCGTT‑AGGTTTTCGGCGA‑‑C‑‑T‑‑GTTAG‑‑ATCGAGCGCCGCGAGGGCGGCGCTCGATATCACCGGCGATTAAAGCCTAAAGTCATGCGTCTGGCGGCCCTGCCGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgaacgca              >  2:248227/1‑148 (MQ=255)
                                                                                                                               ccGTT‑ACGGTTTCGGCTC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCGCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgt          <  5:365018/149‑1 (MQ=38)
                                                                                                                                ggTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCTATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtg         <  3:47385/148‑1 (MQ=255)
                                                                                                                                  tt‑AGGCTTTCATCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCGAAAACCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtggt       >  4:182503/1‑149 (MQ=21)
                                                                                                                                       gTTTTCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTAc   >  8:262027/1‑149 (MQ=255)
                                                                                                                                        ttttCGGCGC‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACa  <  7:78672/149‑1 (MQ=255)
                                                                                                                                              gcgc‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgctgc                              <  5:31003/115‑1 (MQ=255)
                                                                                                                                              gcgc‑‑C‑‑T‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgctgc                              >  6:31003/1‑115 (MQ=255)
                                                                                                                                                            ||                                                                                                                                       
CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTT‑AGGTTTTCGGCGC‑‑C‑‑T‑‑GT‑‑G‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACA  >  NC_002947/1070098‑1070379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑