| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,458,892:1 | +A | 5.1% | intergenic (+17/‑45) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,458,892 | 1 | . | A | 5.1% | 322.4 / 9.6 | 78 | intergenic (+17/‑45) | leuS/PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base . (35/39); new base A (2/2); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.64e-01 | |||||||||||
CCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAA > NC_002947/5458755‑5459034 | ccGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCgg < 1:216399/149‑1 (MQ=255)ccGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCgg < 4:313399/149‑1 (MQ=255) gaagaaGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGTgg < 3:120604/149‑1 (MQ=255) agTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑gg > 1:40960/1‑148 (MQ=255) gAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAg > 5:173109/1‑149 (MQ=255) gAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAg > 4:315926/1‑149 (MQ=255) gAAGACGCTGCCCGCAGCAACGAGAATGTCCTGCGATTCATCGATTGCCTGACCAACAGCAAGGTCATCGTGGTACCGTGCAAGCTGTTCAACATCGTCTCCAACTGATGAAAACGCCCACCCCC‑ATCGAATGCGGGTGGGC‑‑‑GGAACa < 5:86916/148‑1 (MQ=255) aGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGc < 1:62176/149‑1 (MQ=255) gCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGcc < 2:40960/149‑1 (MQ=255) gCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCa > 5:97969/1‑148 (MQ=255) cccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCCTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGCCCCaaaacg > 7:23648/1‑147 (MQ=255) ccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAggg < 5:329909/149‑1 (MQ=255) ccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAgg > 7:53225/1‑148 (MQ=255) ccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAgg > 2:306876/1‑148 (MQ=255) cGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAgg > 7:196884/1‑147 (MQ=255) cGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGa < 7:268818/149‑1 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCaaaa < 7:133478/144‑1 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCaaaa > 8:133478/1‑144 (MQ=255) agcaACGAGAATTTCCTGGGCTTCTTCGATGGCCTGACCATCCGCAATGTCATCGTGTTACCGGGCAAGCTGGTAAACATCGTCGCCAACTGATGAAAACGCCCACCGGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAg < 8:17572/147‑1 (MQ=255) aCGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGcaacaa > 3:186114/1‑149 (MQ=255) agaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACAt < 8:53225/149‑1 (MQ=255) gaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGCGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATg < 8:230172/149‑1 (MQ=255) aTCGATGGCCTGACCATCCGCAATGTCATCGTTGTACAGGGCAAGCTGGGCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGTC‑‑‑GGAACAGGCCCAAAAGGTAGCAACAACATGATCAAACGCAATTTGc < 2:32060/149‑1 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGc > 8:61150/1‑149 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACAGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCACAAAGTGAGCAACAAGATGATCAAACGCAATTTGc > 8:264233/1‑149 (MQ=255) tCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCt < 4:186114/149‑1 (MQ=255) cGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTg > 3:17534/1‑149 (MQ=255) cGATGGCCCGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAgg > 2:214226/1‑118 (MQ=255) cGATGGCCCGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAgg < 1:214226/118‑1 (MQ=255) gATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTgg < 8:196884/149‑1 (MQ=255) ccTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATc > 5:173350/1‑149 (MQ=255) cTGCCCATCCGCAAGTTCATCGTGGTACCGGGCAAGCTGGTCAACATCGGCCCAAACTGATTAAAACGCCCACCCGC‑ATCGATTGGGGGTGGGC‑‑‑GGAACAGGCCCAAAAgg < 5:54741/111‑1 (MQ=255) tGACCATCCGCAAGGTCATTGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCgg > 3:315556/1‑149 (MQ=255) tGACCATCCGCAAGGTCATTGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCgg > 3:310563/1‑149 (MQ=255) cATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAATGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGccag > 1:60705/1‑147 (MQ=255) tCCTCAAGGTCATCGTGGTACCGTGCAAGCTGTTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGc < 6:225820/149‑1 (MQ=255) cGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCgg < 2:24274/149‑1 (MQ=255) gCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGt < 3:315926/149‑1 (MQ=255) ggTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAggg < 8:53668/98‑1 (MQ=255) ggTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAggg > 7:53668/1‑98 (MQ=255) gTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCCTGGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCa < 1:265148/149‑1 (MQ=255) gTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGc > 5:115426/1‑149 (MQ=255) aTCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCt > 5:64459/1‑147 (MQ=255) gTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAgc < 6:301688/148‑1 (MQ=255) tGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAgcgc < 1:306876/149‑1 (MQ=255) aCCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGc > 7:170027/1‑149 (MQ=255) aCCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATAGGCCTGGCGGTCATGCTCAGCGCCTGc > 7:108932/1‑149 (MQ=255) ccGGGCATGGTGGTCATCTTGGTCGCCAACTGATGAAAACGCCCACCCGC‑AGCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCg < 8:23648/149‑1 (MQ=255) ccGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCg < 3:268704/149‑1 (MQ=255) gggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGt < 7:61150/149‑1 (MQ=255) gCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAg > 6:141271/1‑149 (MQ=255) ggTCAACATCGTCGCCAACTAATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGc < 1:296655/126‑1 (MQ=255) ggTCAACATCGTCGCCAACTAATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGc > 2:296655/1‑126 (MQ=255) gTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGt > 6:311111/1‑105 (MQ=255) gTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGt < 5:311111/105‑1 (MQ=255) gTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTg < 6:115426/148‑1 (MQ=255) tCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgcg > 7:38852/1‑149 (MQ=255) tCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGAACAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCa < 3:83991/127‑1 (MQ=255) tCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGAACAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCa > 4:83991/1‑127 (MQ=255) aaCATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGcgcg > 1:327541/1‑149 (MQ=255) aTCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCa < 6:173350/149‑1 (MQ=255) aTCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTAGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCa > 2:22860/1‑149 (MQ=255) tcgCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCATCTGCGCGGCACCgg > 6:213751/1‑149 (MQ=255) gCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgc < 8:170027/148‑1 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAg > 2:303411/1‑149 (MQ=255) gaAATCGCCCACCCGC‑TTCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGc < 8:12581/148‑1 (MQ=255) aaaCGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCt > 6:303537/1‑147 (MQ=255) aaaCGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCt > 3:39303/1‑147 (MQ=255) aaaCGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGa < 6:64459/149‑1 (MQ=255) aCGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGc < 8:38852/149‑1 (MQ=255) cccACCCGCAATCGA‑TGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGt > 1:21975/1‑148 (MQ=255) cccACCCGCAATCGA‑TGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGt > 4:231171/1‑148 (MQ=255) ccACCCGC‑ATCGATTGCGGCTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCACGTAATCGGCCTGTCGGTCATGCTCAGCGCCTGAGGTTTCCAGCTGAGCGGCACAGGCGCCACCGAGCTGAGCCTg > 6:96867/1‑148 (MQ=255) cACCCGCAATCGA‑TGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 2:21975/149‑1 (MQ=255) cACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 6:97969/149‑1 (MQ=255) cACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 6:122868/149‑1 (MQ=255) cACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 4:17534/149‑1 (MQ=255) cACCCGC‑ATCGATTGCGGGTAGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 1:22860/149‑1 (MQ=255) | CCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGC‑‑‑GGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAA > NC_002947/5458755‑5459034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |